ZFLNCG00215
Basic Information
Chromesome: chr1
Start: 17552786
End: 17553382
Transcript: ZFLNCT00313 ZFLNCT00314 ZFLNCT00315
Known as: si:dkey-167i21.2
Genome Browser
Express profile
Download
Express in top 10 samples
Sample | Tissue | Condition | FPKM |
---|---|---|---|
SRR748488 | sperm | normal | 4401.62 |
SRR800037 | egg | normal | 1558.17 |
SRR527835 | tail | normal | 966.87 |
SRR1647679 | head kidney | normal | 652.60 |
SRR1647681 | head kidney | SVCV treatment | 465.63 |
SRR800043 | sphere stage | normal | 456.51 |
SRR800049 | sphere stage | control treatment | 224.22 |
SRR1621206 | embryo | normal | 217.52 |
SRR800046 | sphere stage | 5azaCyD treatment | 201.35 |
ERR023143 | swim bladder | normal | 200.85 |
Express in tissues
Correlated coding gene
Download
gene | correlation coefficent |
---|---|
si:dkey-241l7.2 | 0.74 |
si:dkey-241l7.5 | 0.74 |
si:ch211-250e5.16 | 0.73 |
gtf3ab | 0.71 |
s100a1 | 0.71 |
si:ch73-189n23.1 | 0.70 |
wu:fi09b08 | 0.70 |
zgc:171670 | 0.70 |
zgc:165539 | 0.69 |
si:ch211-12e13.2 | 0.69 |
Gene Ontology
Download
GO | P value |
---|---|
GO:0006396 | 4.34e-11 |
GO:0016070 | 1.19e-10 |
GO:0007165 | 1.48e-10 |
GO:0090304 | 1.97e-10 |
GO:0044699 | 1.97e-10 |
GO:0034660 | 1.48e-09 |
GO:0006139 | 2.12e-09 |
GO:0046483 | 4.62e-09 |
GO:0006725 | 5.25e-09 |
GO:1901360 | 5.74e-09 |
GO:0044425 | 1.67e-10 |
GO:0016020 | 1.95e-10 |
GO:0016021 | 2.74e-10 |
GO:0031224 | 2.92e-10 |
GO:0019031 | 6.47e-09 |
GO:0036338 | 6.47e-09 |
GO:0043186 | 2.87e-08 |
GO:0044459 | 7.38e-08 |
GO:0005634 | 1.11e-07 |
GO:0044428 | 4.02e-07 |
GO:0030246 | 1.23e-10 |
GO:0003676 | 1.46e-07 |
GO:0005215 | 1.60e-06 |
GO:0004871 | 3.34e-06 |
GO:0003723 | 6.59e-06 |
GO:0022857 | 1.44e-05 |
GO:0004872 | 2.65e-05 |
GO:0060089 | 2.65e-05 |
GO:0015075 | 2.87e-05 |
GO:0022892 | 2.98e-05 |
KEGG Pathway
Download
Conservation
Zebrafish lncRNA Transcript | Human lncRNA Transcript | Mouse lncRNA Transcript | Methods |
---|---|---|---|
ZFLNCT00314 | ENST00000415070; NONHSAT182102; | ENSMUST00000194345; XR_001781704; NONMMUT024092; | Direct blastn |
OMIM
OMIM of this lncRNA gene hava does not exist!
Sequence Download
>ZFLNCG00215
TCATTTCAAAGGTTTATTTCACCAAAGGTCAAAATGAGAGCAGATCAGACAGTTATACAAAGTTAAATAT
CCATGATTTTACAGCATTTTTTTTTTATCAGAATCGTCGATATCATCTGATAACACATGGGTCAATTTCC
AACTTCAGCCTGCATGGCCATAGTAACTGGTGGTAGGAAGAGCCATCTTTTTAAAAAGTCACATGATCTG
CAATTCAGTCCTTGGTGAAGATCCAACATGGCTAATTTAAGTCTCACATTTCTTCTCCTGCTCAATGGCT
AGACAGATGGCATTTGGGAGGAAACAAAAATTAGCTGAAATAAGAAAGTAGGATTATTCCATGAAGCTCA
TACTTACTCTCTTTGGTGGGAAGAGTGTTTTTCTCATGAGTTACGGTCTTCTTCAGCTTGTTCTTGTCGA
AATGAGAAACCTCACTGACATCAGGTTTGTCAGACATTGTTTTGCTTTAGCTTCTCTAGGAGGATGTGAA
TAAAATAAATTAAAACAGCTCACTAAAAATGACAACACATAACCAAACTTAGTACACAACTTACTTAAGC
CTGAAGCGCAACAGATGAGGGATAAGAGACACTGAC
TCATTTCAAAGGTTTATTTCACCAAAGGTCAAAATGAGAGCAGATCAGACAGTTATACAAAGTTAAATAT
CCATGATTTTACAGCATTTTTTTTTTATCAGAATCGTCGATATCATCTGATAACACATGGGTCAATTTCC
AACTTCAGCCTGCATGGCCATAGTAACTGGTGGTAGGAAGAGCCATCTTTTTAAAAAGTCACATGATCTG
CAATTCAGTCCTTGGTGAAGATCCAACATGGCTAATTTAAGTCTCACATTTCTTCTCCTGCTCAATGGCT
AGACAGATGGCATTTGGGAGGAAACAAAAATTAGCTGAAATAAGAAAGTAGGATTATTCCATGAAGCTCA
TACTTACTCTCTTTGGTGGGAAGAGTGTTTTTCTCATGAGTTACGGTCTTCTTCAGCTTGTTCTTGTCGA
AATGAGAAACCTCACTGACATCAGGTTTGTCAGACATTGTTTTGCTTTAGCTTCTCTAGGAGGATGTGAA
TAAAATAAATTAAAACAGCTCACTAAAAATGACAACACATAACCAAACTTAGTACACAACTTACTTAAGC
CTGAAGCGCAACAGATGAGGGATAAGAGACACTGAC