LncRNA Gene

ZFLNCG00239

Basic Information

Chromesome: chr1

Start: 18502473

End: 18505816

Transcript: ZFLNCT00351

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR1021215 sphere stage Mzeomesa 88.69
SRR1035981 13 hpf rx3+/+ or rx3+/- 82.26
SRR372793 shield normal 79.51
SRR1021213 sphere stage normal 77.52
SRR658533 bud normal 73.31
SRR372796 bud normal 72.04
SRR658537 bud Gata6 morphant 71.19
SRR1035978 13 hpf rx3-/- 67.92
SRR1035984 13 hpf normal 67.39
SRR372791 dome normal 67.03
Express in tissues
Correlated coding gene Download
gene correlation coefficent
drg2 0.86
gemin8 0.86
naa10 0.85
cirh1a 0.85
lrrc59 0.85
polr1c 0.85
LOC570267 0.84
rrs1 0.84
dnttip2 0.83
exosc2 0.83
Gene Ontology Download
GO P value
GO:0000387 2.84e-12
GO:0000278 2.84e-12
GO:0051783 1.44e-11
GO:0051052 1.44e-11
GO:0051028 1.44e-11
GO:0006302 1.60e-11
GO:0006270 1.67e-11
GO:0022613 1.76e-11
GO:1901990 1.98e-11
GO:1901987 1.98e-11
GO:0071011 2.84e-12
GO:0005686 7.67e-12
GO:0000775 1.51e-11
GO:0000502 1.76e-11
GO:0005684 1.91e-11
GO:0098687 1.98e-11
GO:0071010 2.17e-11
GO:0061695 2.99e-11
GO:0097525 4.47e-11
GO:0030532 4.47e-11
GO:0008094 1.98e-11
GO:0008175 2.43e-11
GO:0070035 3.17e-11
GO:0008026 3.17e-11
GO:0003724 3.45e-11
GO:0008170 4.50e-11
GO:0030515 4.78e-11
GO:0008757 5.16e-11
GO:0004004 5.33e-11
GO:0008186 5.33e-11
KEGG Pathway Download
KO P value
ko03040 5.17e-62
ko03013 7.97e-46
ko03008 4.43e-34
ko04080 1.64e-29
ko03030 3.22e-21
ko04110 5.49e-21
ko03440 1.20e-20
ko04111 3.23e-19
ko03050 9.40e-16
ko03420 1.03e-15
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT00351 ENST00000413187; Direct blastn
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG00239
CCATTTCAAAGTCTCTGTTTATTTGTGTGTTGATAGCCCTGTGGTACTTGAAGGACTAAGTTTTCTCCTC
ACGACAAAATGTTTCTGCAAGAGTCTGGTTAAAAAAAAAACACCAGTAGTATAAAACATCGAGCAATGTC
TGGCTCTTTCTGTCCTTACACTCAGCATGAAGTCTATTCCTCTACTGTGTACTGCAGTAGATCTCACAGG
TCAGAATCAGAGTCCAGAGATTTATCTTCCTCGTTCTCTTCCTCCATGTGTGTATCTTGTGAAACTGTAG
ACGGTTTGCTGTCGGAGCCTTTGGCTGAAAGCTTTCTCATCTTAATGCAGGGCAGTTTCTTAAGGTCACC
GTTCCATTCTCTGTCAAACACATGCTGACTTTTCAGTACTCTGTGCAAGATGTTATTAACAAAAAGAATG
ATTTTAACAAAATAAACGATGTAGCAACTACCTGAATATCTTCAGATGCTTAGCATTGATGATGTCAGGA
ATTTCTGTAAAGTGAAAAAGAGTAAAAAAAACAAAACTTTTTTACTATTTAGTGCAGTTTTTCTAAACCT
GACCCACAGGGGGTCACAGGAGAGTCTGTGAGGAAGCTTTAAAAAAAATGAATGTAAACGAAACACATAA
ATAAAGCTGATTAAAATAATAACAATTAATAGTAATTAATAAAATCATTTCATTAAATATTAATAAATAT
ATAAATATAAAATAAAAATAAAATAACCAATAAAAATGATCAAGATGAATTGCAAAAACAAAAATCTAAA
ACTTCCAAACAACAAACAAATGATTAAAATGAACCTTTAAAAACTGATTAAACTAAATAAAATAATTAAA
TTGTGTAATAAAATATAAAATCCGTGTTAATGAATAAATTAACATGAGTAGAGGCAAAGTGTAGTAATGT
ATATTATCGAAATTTAGAAACTAAACATTTTTTAAACAGTATTCATTTTTTACAGCATGAGTGAGGTCTA
TTTATAAACTAATTTCAAGAGGATCACCTGCTTATGATTGTTCTCAGCTGGTCTCACATCAGCTCATGAT
TGATTCTCCAATTACATGATTTTTAAACTCACTATAAATAACTAGATTTCCTATTTGAATATCTTTGTCT
TGAAGAACCCACCCCTGCTCCCCCTCCTTTCCAGATGGGTGACAGTGATTAGCACTGTTGCCTCACAGCA
AGAATGTCTCTGGTTAAGCTGCGGTCACACTGGAGTCTGATTATGCGAAATTGTGTCGTGCGGCGCTGCG
AAAAGGGGCAGGAATAAACAAAATTATTAGGCATTAAAAAAGTGAGCGATTGCTCCATGTTTTAAATTAC
TGTCCAGAGTGGTCATGTTTTGATCCTCGATTGTTCTCACGCAGTCAAGTGATGCGATTTCGCAGGTCAG
AAATCACCAAGCTTGAACTTTGCACCGAAGCAACCTGTGAAACTTAGCACATGATACAACCTGTGAAACT
TAGCACATGATACCGAGTTTCCGGCCTGATGCATTAGCGTGCGTATGAATGAAAGTCTATGGGAGGAAAA
GCCCAGTGTGACCGCAGCTTTAAAGTCTCTTCTAAACTAGTTAACCAGTTAAGTTTAGTTGTTTTCTCCA
GGTTCTCCAGTTTCCTCTCACAGTCCAAAAGACACGCAACCCAAAGTAAACTGAAAATACCAAATTGATA
CCATAGCCAAGCTATTAGTACATCTTTCCTCAGCCATCCTATACCTGTCATTAGCCAGAAATAAGCTGGG
GGGAGTTCATCAAGATCTACCTGAGCTCAAACTCGCCTCTCGTCCTCCAAACGGGAGGGAGCCCAGGACT
CGAGGATCTCATTAGCTCAGGGCTCTCTCCCAGGACAGCATGCCACACAAGCTTTGTTATTAATCATCAG
CTAAATGTTAAAACTTGAAATGAAGTATGATGCATTTTACAATCTAATATAATTATATTTAGGGGTCTGT
GGCATAATAAAACACAGTTTTGTTCCTTCTAAATAGTGTCCTAATTATTATGAGAAACATTTTAGTTCAA
ACATTTTCAACATGGTTATCATGCAATTCTTATTAAAAGGGAACAAATAAAGACATCTAAATTATTTACC
AAAGCCATTGCCTTCATACTGAGCTCTCTCTCGCTCTATGGTTTGCTTGATGATGGCCTCTCTAGAGCTG
TGCTGGCGACCCTGGCGGCCTTTGATGCTGTTCGCCAGCTCGATCTGCTCCAGTTCCCCATCAAACCGCT
GAAGATACCTGAGAAAGTTGTATTTATAAATATTCTTAATATACAACTTTTTATCATATTTAAACCTCGG
GATGTGTCATACCTCTCAGTTATTTCACAAGCATCTTGTCTGGTGTATTCTGGCTTGTCAGGGTTCAGCT
GGTTTTGGAACCACAACAGTTTTTCACCTGCAGAAAATGAGTGATCAGCAAACAGGTAAATAATACATTA
GATGAACTTATGTTCTTATGCTAATGTTCTGCCAATGTTTTCTCCAAGACACAACCAAATGTTCCTCCAG
TAATGATAATTGCATATTAGTTCAAAGCTGTCTTTTATAACCTATCTGGTAAGACAAAAATATTATTTAA
GCATCTTTTAGACATTTTTTTTCCTGAAATGTATTATTGGAAAGTTAGGCATGTTAAAACATGTTTTAAA
ACGTCAATAATTAATTGTCTGGAATGATTCTGAGAATGTTCAAAAATAATCAAACTTAATATCTTTTCTA
ACGTTTACATAACAAACTCAACAACACTAACGAACTGAATGTTTAGAATATTTTGTTTTGTATTCAACAG
AAGAAACAAGTCCTTAAAAATTTGGAACCACATGAGAGCAAGTAAATGGTGAGACAATTTTCATTTTTGG
GTGACCTAGCCCTTTAATTGAATGTTAGCAAAACACGTTTCCATTAGCTTTGGGAAAATACCAAAGCTAA
CAGAATGACAAAAACTTTCACATTCATTGCTTCCACAAATACAATACAGAATAATAAATAATGAACTACT
CACCAACTAAATTTAAACGCTGGGCCTTTTCACATTTTAACCTAGAGGTGATTATACAAATGCTACATTA
ACAAAAATAACAGTACTCGGTATAAATTCATTTGCTTTTTAGGGACAAAAAAATAAATCGTGAATTGGAA
AAGGCTCTTACTTTTCTTTCCTCTCTTGTTTGATGGCATCTCTGGCCAGATAGGCGGCTTTCCTGCTGTA
TGGGTGAATAACCTTTTTCTCCACCGGCCCCTTTGGTTTTCTCCCTTTAGGCTGAAATAAGAACGCCAAT
TAGTAAACGCGACATTTAAATGTATATTCTGATTATGTAGTCGAAAATGAGTT