LncRNA Gene

ZFLNCG00981

Basic Information

Chromesome: chr2

Start: 23354448

End: 23356376

Transcript: ZFLNCT01419

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR1299125 caudal fin Half day time after treatment 4.03
SRR1299126 caudal fin One day time after treatment 3.73
SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 3.53
SRR594771 endothelium normal 3.50
SRR886457 512 cell 4-thio-UTP metabolic labeling 3.38
SRR535913 larvae krox mut 3.38
SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 3.03
SRR535926 larvae normal 2.99
SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.77
ERR023145 heart normal 2.76
Express in tissues
Correlated coding gene Download
gene correlation coefficent
si:ch211-175g6.7 0.70
eef2a.1 0.65
ptbp1a 0.64
apitd1 0.64
slc25a22 0.63
srsf6b 0.63
trnau1apb 0.62
LOC565380 0.62
crebzf 0.60
araf 0.60
Gene Ontology Download
GO P value
GO:0006396 4.71e-10
GO:0034641 1.01e-07
GO:0090304 3.95e-07
GO:0006807 5.91e-07
GO:0044260 3.71e-06
GO:0016070 4.59e-06
GO:0006364 8.17e-06
GO:0016072 9.45e-06
GO:0006139 1.17e-05
GO:0016071 2.67e-05
GO:0005634 7.86e-05
GO:0044428 1.66e-04
GO:0005730 1.77e-04
GO:0043228 2.28e-04
GO:0043232 2.28e-04
GO:0043229 7.16e-04
GO:0043226 1.12e-03
GO:1990904 1.30e-03
GO:0030529 1.30e-03
GO:0032040 1.46e-03
GO:0003723 8.68e-11
GO:0003676 5.28e-09
GO:1901363 2.14e-06
GO:0097159 2.47e-06
GO:1901265 3.58e-05
GO:0000166 3.58e-05
GO:0036094 5.73e-05
GO:0008135 5.31e-04
GO:0043022 4.07e-03
GO:0030515 4.79e-03
KEGG Pathway Download
KO P value
ko03040 3.26e-04
ko05168 1.09e-03
ko04211 1.15e-03
ko03008 1.67e-03
ko01521 4.85e-03
ko05161 5.11e-03
ko05152 7.08e-03
ko05162 7.51e-03
ko05134 1.22e-02
ko04115 1.22e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT01419 ENST00000441378; XR_001739542; NONHSAT077343; ENSMUST00000119024; NONMMUT057744; Direct blastn
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG00981
TATTCACAAAGTCAATTTATTTCAATCTGCACCCAAATGGTATAGTACTGCCAACTGTAGAGCTGGTGTT
GATCTGCTCCACGAGTACAGCTTTGGCCATTGCAGCTCTTCATGTGCACTGCAGAAACAAACAGACAAAC
TGTTAAAACCTGCAGAAAGCTGAAAAAAACAAAACAAAAACACAAGACTGGCTGGTCAACTGACCAGTGT
TATCATATTTACACAAGTTATCAAGCAAACTACAGACAGTCAAACATTTTTTTAATCAGACATAAATGAT
AAGCTTACATTTTTCAGACACAATTAATTTTGTCTTAAAAAAAAAAAATGATGACTAGCAATATTTCCAG
CAGTGAATGTTGTTTACTGACCTAGCGAAGTCTCCTGGCCTCTCTTTCAGACTCCAGAAGTGTCAGCACA
TCTCCTTCTCTGACTGGGCCCTTCACGTTCCTGATGATTGATCGGTTGCTGTCATCCATGAACTCAACAC
GCACCTTTGAAAACAGGCACAATGCAATTTGGTTCATTTATAGCCAGAAGAGAAGCATAATTCTTTAAAA
AAAAAACATCCTTTAATGAATTATAAGTACTTTTAAATGCACGTAGCTTCATAATAATTTCATAATACTT
TTATAATTAATAATAAAATAAGCATCATGTTCATTTGGAGTACATTCAGGGGTCAAAATGGGTTTTTTCT
TTTTTTTTTAATTAAGTTTGACCAACTTTTTAATATTATTTCCCAAAAATGTTTGTACAGTATACGCTTT
TTTCAACCGATCTCCCACATACGAGTGTGAACGGTTAACTAACATTAACATGTACGCCAACTAAAAACAT
TACAACACTATATATATACACACACACACACACACGTTTATTTTTTAAGTCTAAAATTGAACATTTAAAC
TACAACGCATTTTAAATCAGGTTATGATCATGTTAAACAGAAATGCATCTTCCATGGAATTTAATCTTAA
AAAAAAAAAAAACATAAAAAATAAAAATCACATTATATTATACACCATATTCATTTCTGAAACCCCATCA
GTACTCACATTTACACGCACATCCTGCCACAGCGTTACCCTTTCCTAATCTTTACAAATTAGAATTTTAA
AAAAAAGTCTACATTGAATTTCACATTGACTAATTAATAACCTGCTGATTAGATAGAATATGACTAAACT
ATTTTAATAACTGAATGCCTTTAGAAGCAAAAAACATTATTTCTTTACATTTTAAAATAACAAATCCCAT
GTGTTGTCTTTCAGAGATTGCATCAAGCAAATATGGAAAATACATGTCAATTAATGATCAAAATAATGAG
AAATTGTTGTTTTGCATTTTTACTTGCCATGCTGAGCAAAATTAAAAAATATATATTCTATAACCTCTGT
AGTGATGACACAAACTTCCACCTAGGTTAAATTAACAATGCTTTACCCGTTTTAGAAATCAACACAAGGT
ATTTTATTTCATGCTGCCAAACGTATATTCCTGAGCATCTCTGCAGCTCCACATGACTCCTAACATGTGT
AGAGTATGAGCTTACCTGGGTACACTGTCCCTGGGAGCCAGTTCTTCCCAGCACTTTTGTAACCTGTAAC
AAACAGTTACCACATTATTAAACGTGTCAGGCGAGTAAAATTATCCTATATAAGCTGTTAGCTAAGCAAA
CTTTTGTATAGCATAATGCTAACGCTAACTAAAGGCCTGACTACAAGCACCGCTGTATTCCTGAGCGTGG
ATGTGACAGGATTTTACGACTATTAAAGAATCATTTTCCCGAAAAAGACTTCAATCTACCCGAGTTTCAT
CTAATAAGTTCTAAATAGCAAAATAAGAAGGTAAATACTCAATAAATTTTATTTTACTTACTCTGGCGAG
CTTGATGGGCTGCACGCGGCTGGCGTCCATGATTTCAG