LncRNA Gene

ZFLNCG01238

Basic Information

Chromesome: chr2

Start: 43479220

End: 43480211

Transcript: ZFLNCT01797

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR1021215 sphere stage Mzeomesa 68.37
SRR1021213 sphere stage normal 64.50
SRR514030 retina id2a morpholino 61.12
SRR748491 germ ring normal 43.48
SRR514028 retina control morpholino 40.24
SRR592699 pineal gland normal 38.93
SRR748489 egg normal 38.65
SRR748490 1 kcell normal 35.03
SRR592698 pineal gland normal 28.86
SRR592703 pineal gland normal 27.66
Express in tissues
Correlated coding gene Download
gene correlation coefficent
pard3 0.60
LOC792564 0.57
tjp2a 0.56
myo5b 0.54
tmco3 0.54
LOC101884022 0.53
lycat 0.53
fam160a1 0.52
gipc2 0.52
tmem79a 0.52
Gene Ontology Download
GO P value
GO:0051660 6.40e-04
GO:0036032 6.40e-04
GO:0060242 6.40e-04
GO:0051656 9.59e-04
GO:0051640 1.29e-03
GO:0007405 1.92e-03
GO:0032291 1.92e-03
GO:0022010 1.92e-03
GO:0043588 2.56e-03
GO:0072089 2.56e-03
GO:0005923 4.21e-04
GO:0070160 4.38e-04
GO:0016459 5.31e-04
GO:0005911 3.24e-03
GO:0030054 1.07e-02
GO:0055037 1.08e-02
GO:0016324 2.28e-02
GO:0044430 2.76e-02
GO:0003774 1.92e-03
GO:0015299 7.02e-03
GO:0015298 1.65e-02
GO:0003674 3.17e-02
GO:0015297 3.65e-02
GO:0017111 3.83e-02
GO:0016462 4.19e-02
GO:0015078 4.21e-02
GO:0016818 4.22e-02
GO:0016817 4.32e-02
KEGG Pathway Download
KO P value
ko04530 5.83e-04
ko04144 2.97e-02
ko05144 3.69e-02
ko04962 4.73e-02
ko04961 4.81e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT01797 NONHSAT182673; NONMMUT110740; Direct blastn
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG01238
ACTTTCTCCAGAAGAAAAAATATTATCAGACATACTGTAAAAAATTCCTTGCTCTGTTCGACATCATTTG
GAGAATATTTAAAAAAGGAAAAAAAATCTAAGAGGGGCTAATTATTCTAATATAATGCATACCTTAGGAA
TTGGAATGGAAAATTATAGCACTTTTAAAACCTTGACTTTTCCAAACCATGGTAAACCTTAAAACCGGTT
ATCAACCCATGCCTAGTCTTCTTCATATAAATCTCAGTGTCGATGCAGAAACACTATATTGTGCATCTGT
AATCCTGTGCCTTTTTTCCTGTTGTTTTACCAGGCTGACGCCGAGTAACCACGACCGAATCCAGCGCTTG
CGGCAGGAGTTCCAGCAGGTCCGACAGGAGGAGACTGAACCCGATGATCGCCATCGCTCCTACAGCATGG
AGCAGCCCTGGGTGAGTGTGTGAGCTGTGTGTGTGCACCCATGATCACTGGACATACAGCCCATGATCTC
TGGGAGCTCCCAGGACGGAATAAGACAAGTCTGATAAATGACCTCCAGGCATGGGCTAATGCTAACTGCT
AACAACCTGAGACTGCTGCATGCAGGAGCATGTCACCTCTGACACTGACATTATCTGCTAACAATGCTAA
CATCACCATGTGTTCATCCATCTGGACTGTTCACCCCACCATTCATCTGTTCGACCATATCACCGTGACT
TCGGCAGATCATGATTAAGGCAAGAACTGTGATTGGCTGAATTGTTGTGTGTGTGTGTGTGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAGAAAGAGAGAGAGAGACAGAAGCAGGAAGGGGAGTA
TGTGCGTTTGAGTCAAAAGCAATGTTTTTAGACTGAAATTGTGTAGTATTTATGACGTTGAATTTAAATC
TAGATTATTCATATCTGGATCAAGTGTGAACTTAATATGACGATTGGAATTGGGGGAATTAAAACCTCTT
ATGCCTATAGA