LncRNA Gene

ZFLNCG03315

Basic Information

Chromesome: chr5

Start: 33897778

End: 33901675

Transcript: ZFLNCT05089 ZFLNCT05090

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR065197 3 dpf U1C knockout 48.67
SRR065196 3 dpf normal 44.63
SRR1523211 embryo control morpholino 21.00
SRR1291417 5 dpi injected marinum 9.99
SRR038627 embryo control morpholino 9.56
SRR748488 sperm normal 7.21
SRR1004787 larvae impdh1a morpholino 5.48
SRR1004786 larvae control morpholino 5.46
SRR726541 5 dpf infection with Mycobacterium marinum 4.82
SRR038625 embryo traf6 morpholino 4.77
Express in tissues
Correlated coding gene Download
gene correlation coefficent
hoxb1a 0.51
Gene Ontology Download
GO P value
GO:0021578 7.11e-05
GO:0021570 7.11e-05
GO:0021561 1.42e-04
GO:0071695 2.13e-04
GO:0021661 2.84e-04
GO:0021546 3.55e-04
GO:0021593 4.26e-04
GO:0021754 4.97e-04
GO:0021535 4.97e-04
GO:0021545 1.28e-03
GO:0043565 4.33e-02
KEGG Pathway

KEGG pathway of this lncRNA gene hava does not exist!

Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT05089 NONHSAT169075; Direct blastn
ZFLNCT05090 ENSMUST00000181782; NR_033497; NONMMUT020942; Direct blastn
ZFLNCT05089 ENST00000568391; ENST00000622099; rna125076; rna97774; NONHSAT053218; NONHSAT176141; NONHSAT180525; NONHSAT174747; NONHSAT043928; NONHSAT174748; NONHSAT170997; NONHSAT170998; NONHSAT043927; NONHSAT079463; NONHSAT189594; NONHSAT170790; NONHSAT079464; NONHSAT043926; ENSMUST00000145346; ENSMUST00000187147; ENSMUST00000145021; ENSMUST00000185798; ENSMUST00000181782; rna81789; rna81781; rna81790; rna81782; rna81787; rna81788; rna81791; NONMMUT092967; NONMMUT020955; NONMMUT020946; NONMMUT010845; NONMMUT020956; NONMMUT020950; NONMMUT020948; NONMMUT010846; NONMMUT092964; NONMMUT092965; NONMMUT020954; NONMMUT010844; NONMMUT085506; NONMMUT010285; NONMMUT092966; NONMMUT020947; NONMMUT020949; Collinearity with conserved coding gene
ZFLNCT05090 ENST00000568391; ENST00000622099; rna125076; rna97774; NONHSAT053218; NONHSAT176141; NONHSAT180525; NONHSAT174747; NONHSAT043928; NONHSAT174748; NONHSAT170997; NONHSAT170998; NONHSAT043927; NONHSAT079463; NONHSAT189594; NONHSAT170790; NONHSAT079464; NONHSAT043926; ENSMUST00000145346; ENSMUST00000187147; ENSMUST00000145021; ENSMUST00000185798; ENSMUST00000181782; rna81789; rna81781; rna81790; rna81782; rna81787; rna81788; rna81791; NONMMUT092967; NONMMUT020955; NONMMUT020946; NONMMUT010845; NONMMUT020956; NONMMUT020950; NONMMUT020948; NONMMUT010846; NONMMUT092964; NONMMUT092965; NONMMUT020954; NONMMUT010844; NONMMUT085506; NONMMUT010285; NONMMUT092966; NONMMUT020947; NONMMUT020949; Collinearity with conserved coding gene
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG03315
TGCCTACAGTTTAATCATCTTCAGAATGCCGCAAGCACACAGCGTGACCGCGAGTCGCATGACAAAAGCT
GACTGATCAGGTTCTTAGTATAAAATATGCACATTTCGGTAAACTAACTACCTCAAACATTGAACACCCA
AACACCACAATTTTCATCTTAGCTAAAAGGTCTAAGCTCCTTGGCTTATATCAGAACTGCAGCAATGTTT
TTTTTATTTGTCATCCTCTGAGAAAGCAGCTAATTGATGGTCGCCTAGCAACAACAAAAAAGCAACGAAA
ATGCCGAAGGAACCGCCTCTCGCTTTCCACGCGCTTTCAGAGACGCGATATGCACGCGGCCCACAAACCT
ACCTAAATGAAGAATTGATGTTCATTTAAAACGGTGAGGTATTCGGGAAAATTATTGACTTACTTGATAT
TTTTAAGATTTTTTGGAGGGCGGGGTAAAGTTGGCCCTTCCTGTCTGGCTATCAGACTACCACAGTTTCT
GTATTCCAGGCTTCTGGGTTTAATCTATATCCGCAGACAACTAGCCACCCAGGTTAAGGCCCCCGACAGC
AAATGGTCTTCCCTTCTCAAAAACGTAAATAAGACAGCGTTACTTCTCTCACGGACATCAACGCTAGAAC
TAACTTAAGTTTGCGCTCTTTAGATGAGGTGGCTGGCGAGTTCCAGTGGAAAACATATCATTTTGCTATT
TAATAATTTACTTCCGTTTTTTAATGCCACACATCAGAACCATGAAATACTGCCATCTCTGTAATACTCG
TGTCCAATATTTTTATACTCGTTTATTCAGTATTTAAAAAATAAATCCAACTTACTGACAATGTCCAGGC
GAGGACAGTAACGTTATAAGAAGTTCCTCACTTGGAGACACACGTGCTATACCTAACTTACAACTACTAA
AAGTCGCAGATGGCAGGTAAATAATATTGATTAATGAGAATAAAGTATGCAAAATATATTTGTGTTCGTA
ACTTTCCATATAATGGAGATATAAAAATCATTTTTATTTAGAATGATATAAGAATAATGTCTAATTGTGA
CACTGTCATGTTTTAATGTTTTAGTTAAGATGCGTAGCTGTAATACTCAAGATCATTGGGAACCGTGTCG
TTTATTTTAAAAAACCCTACAAATTGGCAATTTATAGTAGTGATAGTAGTACTTTCTCTGAACTGACTCC
TAATTTTAGCTTTTGTAAATTTAATTTCTGGCAGGGGTGGAGGATGGACCCTTTTCACATGACTGTTTAA
CAGTTATCAGCATCATAAATCCTTGAAAGTGTTTAATATTTAGATTTTTTTTTTTTAAATATATGTACTT
TTATATGTAGTTATGTATGCATTATATCACATATTTTATTATATCTTTGCTGTGTACTGCTTGTGCCAGG
TGATTTAAAATAGACAGGACAGGAAATTTGTTACCATAGTGGAGTTTTTTATTATTATTATTTTAGCTAA
CAGAATTGTAAAAAAAAAAATAAAAAAAGACTTATTGTAGGCCTATTTTCCCATTCACTACTTTCTAAAT
TTACCCAACTATGAAAGCTTCCGCCACATAGGGTTAAAAAAAAAAAAAATATATATATATATATATATAT
ATGAACTCAACGTTTTTTAGAGTGACTCTAGTGGTGACAGTGGTCTATTGCCCAGCACAACCAAATACAA
AACTAATTGCTGAGTTCACATAAATTTTAGGGAGTAATACTTGCAAATTTGACTGTACTTTAATTGTTGG
GGACTTTAATATTCATATTTGCTGTCCTCTGCATCAGTCTCAGTATTTTGTTTTGTCATGAAACTAATAA
TAATAATAATCACTAACCCTTTGAATAAGTATAAGTATAATGAATAAGTATAATGCATAGCAAAATAAGT
GTAGAAACAGGCTGCTCCTGGCCAGATGTACAATAGAGTGTTTTAACAGTCATTCTCAAAGCGACTAATA
AATACTGTAATTAAATATTTACAGTACCAGTTATTTTTTTAGTGTACAGTGCAGTCACAGACATTAGCAA
GCTACTGTAAATAAGATAAAACAAACCTTGGTTTGTAAATTAATTGGCTGTAAACTAATATAAACTTCTA
ATACAGATGGCAAATACTATGATGCATTTAAGTGTTAGTGGCACTCAAATCATCACTAACAAATAATCTG
CTACATAAAAGTGAGGTTGGTAGCTCTTGGTTGCAATGTTGCTGTTGTGAATAAAAAATATATATACATA
AATTATTTACATTTACACAATTGTAATATTATTAATTGTTGTTAATATACACATGTACATACAAATATGA
TAAAATAAAAAGCAAGAACAAGGTATAATAGTCAGAAATGTTTATTTGATTTTTACATTGTCACAGTTGT
TGAACGTCGTTTACTCAGCAGACTCCTTGCCCTTAAAAATAAAAATAAATATTGTAAGACGATGATGTGG
TATAAATGTCACCATACTGTAAAAACTTAAAACACTAAGTTGTACATCCTAATTTTTTATAATCACCTTT
CCAGCGTCACGGCTCTTGGCTCTGAGCTTGTTGACCTGGGACTCAGCTATATCAGCACGCTCCTCAGCCT
CCTCCAGCTCATGCTGCACCTTCCTCAACTTGGACAGGTGAGAGTTGGCTTGTTCTTCCTGCAAAGTCAC
ATACAACTGTATTAGTAAAAGAACATCTTGGAAGTTTACAGGTGTTTATGTAAAGTTCTCAAATGAGGAA
CTCACAGCTTCTTCAGACTGTCTCTTGTAAGCCTTGACCTTCAGCTGAAGCTTATCAACCAGATCCTGCA
GCCTGTTGACATTCTTCTTGTCCTCCTCAGTCTGCATAAAGAAACATAGATTAATGTAATTTAAACTTTT
GCCAAACTTTATTTTATATTCATTTGATCAAATTTTTTGCTCTGATGTCTTTACCTGGTAGGTGAGCTCC
TTGACTCTCCTCTCATATTTGCGGACGCCTTTAACAGCATCAGCTCCACGCCTTTGCTCTGCCTCAATTT
CAGTCTCAAGCTCACGAACCTAAATAAAACACATTATTGAACAAATCTGACTTAAATAGGAATCTGATTT
TTCAGTAGTATTCCAACACAACACTCTATTTACATGATAATGATTAACATGAGAATAAAATCCTGCTTAC
TCTGGACTCCAGTTTCTGGAGTTGTTTCTTTCCTCCCTTCATGGCCAGATTCTCAGCCTCATCCAGACGG
TGCTGCAGGTCCTTGACTGTGATCTCCAGATTCTTCTTCATCCTCTCAAGGTGAGCACTGGTGTCCTGCT
CCTTCTTCAGCTCCTCTGCCATCATTGCAGCCTTTTACATGAACACAAATCTCCATTAGCATCTCATTAT
TTTTTTAAATACACTAAGCATTTAGCATGTTCTGTTGCTCACGTCAGTGATGGCCTTCTTGGCCTTCTCC
TCTGCATTTCTGGCTTCCTGTACAGTGTCTTCAACTTCACTCTGGATCTGAACAAGGTCAGCCTCAAGCT
TCTTCTTGGTGTTCAGAAGACTTGTGTTCTACAACATGGAAAGCAACAATATAAATGTATTGGAAGATGC
TTTCAGCTATCTTAATGACATTGTACAAAAGAAAACAAAAAACAAAGCTATTATTCTTTTACCTGAGAGT
GCAGCAGCCCAACACGCTCACTGGCATCCACCAACTCTTGTTCAGCCACTTTGCGTCCTCTCTCTGTCTG
CTCCAGAGCAGCTCTCAGCTCCTCAATCTCAGACTGCATCAGAGTGTTTCTGCGCTCCACCATGGCCACC
TGCTCCTTCATGTCTTCCTGTCCTCTCACGGCATCATCAAGGTGCAGCTGGGCATCCTGAACACAACAGA
GTAGTTGTTTTATGAAATGTAATAAATCTCTTTTAGATAAAGGTGGA