LncRNA Gene

ZFLNCG03412

Basic Information

Chromesome: chr5

Start: 42744831

End: 42747500

Transcript: ZFLNCT05220

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR658537 bud Gata6 morphant 107.41
SRR1569491 embryo normal 69.77
SRR1569495 embryo normal 68.39
SRR065196 3 dpf normal 65.19
SRR038626 embryo control morpholino and bacterial infection 58.90
SRR038625 embryo traf6 morpholino 57.28
SRR038627 embryo control morpholino 50.85
SRR038624 embryo traf6 morpholino and bacterial infection 49.95
SRR1523211 embryo control morpholino 48.78
SRR065197 3 dpf U1C knockout 48.26
Express in tissues
Correlated coding gene Download
gene correlation coefficent
fgf17 0.69
si:dkey-20i20.2 0.68
zgc:171551 0.61
si:dkey-159f12.2 0.60
zgc:112977 0.60
nr5a1a 0.59
v-fbpl 0.58
tbx6 0.56
crfb9 0.56
lamtor1 0.56
Gene Ontology Download
GO P value
GO:0032439 1.14e-03
GO:0030728 2.27e-03
GO:0043401 3.29e-03
GO:0009755 3.91e-03
GO:0032008 4.54e-03
GO:0009888 4.97e-03
GO:0021523 5.67e-03
GO:0001919 5.67e-03
GO:0009952 7.37e-03
GO:0042632 7.93e-03
GO:0071986 5.67e-03
GO:0031902 1.36e-02
GO:0045121 2.03e-02
GO:0098857 2.03e-02
GO:0005922 3.58e-02
GO:0090575 3.91e-02
GO:0005921 4.24e-02
GO:0010008 4.56e-02
GO:0044798 4.56e-02
GO:0004958 2.27e-03
GO:0003707 3.46e-03
GO:0004960 4.54e-03
GO:0003676 6.59e-03
GO:0019145 6.80e-03
GO:0047105 6.80e-03
GO:0004957 9.06e-03
GO:0004955 1.02e-02
GO:0004954 1.02e-02
GO:0055077 1.02e-02
KEGG Pathway Download
KO P value
ko05224 8.16e-03
ko00531 1.90e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT05220 ENST00000453728; NONHSAT137299; NONMMUT022788; Direct blastn
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG03412
TATTCCGTACGTTGAAGCGGGAGTTCATCTGGGGCAATGGGTCCATACCCAGAACCTTGTGAATCTGCCG
GAATGCCAGCAGCCTCAAGGCAAACTGTGGAGAAAGTGAATGATTAGTACACATTTCATAATTATAAAAC
GATCAAAACACATAATTCAGTTTAGGGTGCATTAACACTTTAGGATCGGTTCTCTTTAGTTTACCCAAAA
AAATAAAAATAAATAAATGTTAATTCCTCACCCTTACTTATCTTATATATATATATATATATATATATAT
ATATATATATATATATATATATAAATATATATATAAATATATATATATATATATATATATATATATATAT
ATAAATATATATATATATATATATATATATATTTATATATATATATATATATATAAAAAATAACACTATA
CGCACGCACACAAATAGAGTGGGGGTGGGGTTGGTCGATTAGCTTAAAGAATGTAACTCGCCCTTAAATA
GAAGGAGAAAGGTGTGGCAATCTGCTTTTTGGGTTTTGCTTTCCATTGTTACCTCTGGTTAAAGTAATCG
GTTGAGAAATTCAATTGCGTTTATGGATAACATACTTATGTTACTGCCAAAAGTGGTTTGAGCAAACATA
CCTCAAGTTAGTAGGTTTATGGTTATGGAAATAACAGAATACATGGATTAGCGAACCATGGTTATTAAAC
CGAACCATACCTTTCACTGGAATTGAACTATAAGTGAACCAAACTTAAAAGTATAAAATGTACCCTTGAA
TGAAATAAAGAGTCTTTTATTTGACTGACAAAAGTTATTTTACCTGAGCGCTTGACGTAATGTCCTCTCT
CTGTTGCTCTTCCATGAATGCTAGTGTATCTGTTGGATTCTTCTCACAGGGGTCAATCAATCCTGGAGCA
CCTGCATTACAAGGAAAAGTCGAGCATATACTGAACTAAGCATCCAAATAAAAAAGTAGAGTTTGTGTAG
AGTTTGACCAACTCTCCTACTAATCCATGTCATTAAAAACATTTGCATTTTCAATGTCTCTTAGCCATGT
TTTAGGGGGGAATTGCATCAATACATTCAGATCTTACCTGATAGCAGGATGCCTGAGGAAATACATTCAA
AGACTCTTCGCAGAGCATCTCCAGGGCTCATTGGTCCAGAGGCACTGCTGATGGCCTTCTCCACCAGTAG
CTCCATAGCCTTGAATTTAATTTAACACCATTTAATTTAGTTGCTTGTAATTTGAAAACCATTGCTAAAC
CACACCAAAGGTTATAAAAGGAGACAGAGTGCAAAAAAACAAGAATTCCTAAAATTAACTTGTACCCATC
TGTTTGCATCACAACAAAATAGACTTTGACGTTCCCTAGTACTTTGGTTCCTAATGCTGCATTCACCCCA
GACACTGTACGCATTAATTAAAAATAAATAAATAAAAAATAAAAACGCAATATTATTATGTTATTAATAT
TAATATCATTTATGGACACATGAACAGAGTGAAATCCTCTTCACAATAGACGCAGATTCACGTCATGGGC
ATGGGCTAATATGGATTTTATTGAGATAGTAGCCGTGCTTTGTGCATTAGGAAGGCTGAAAAACAGCATA
TTCGTTTGGCACAGTGTCAGAGTCCATTAGATTCTTTCAGAGGAGCACCCAGCTCTCCGAGTTTATCATC
AACTCCTCCAGGAACTATATCTGGATAAAGGGCTTCAGTGGTGCTTCAGACTGAGCAGGGCCCAGTTTGA
TGAACTTGTCTGTAAGAGGATTTTCGCTTGAGACACCAACAACTGACACTACATAGTAACTCCCCTATAA
GAGCAAGCTTCTGATTGGTTAATGCAGCGCGAATGTCCACTGAAGTTCATATTTTCCTACTTGATCGATT
CGTACTGCTTCATTTGAACTAATCTCCTCATTCACACTGCAGGATGTCTATACACGTGCTTGATGCGTGT
GGTGTGAAAGCAACAAACTCAAGAAAAAAAAAAAAAAAAAATACACAGGAAATTTGTTGGCCACTAACGT
GCGCCATCAAAACAAACAAACTTGACAATCTTGAAAGCTTTGAATTATATTGCATTATAAAAATTCTACA
TAAAAACTGCAGGTAAGGTCTCAAAATTACAATTCTCATTGTTCAGGAATGTGAATGCAAAATACAGTGA
ATGCAAAACTCAATTTCAAAAAGAAACTCTGAACCTTTCTTTGCCTTAGACTACCCAATATTTTTGTGTT
ACAATGAACATGGTGTCAGATTATGCATTCACTAAATTCTAGACAATAAGGAAAAACGACAGATAACATG
TTGCTACTTGACATGTGTATGAATACAACCAACTATCAAAATAAATTAACCAAATGGCAACCAAAAAAAG
TGACATACTCCAGAATTTAGATACCTTTTTTTGAAGGTCTACCGAAACAAAAAGCATAAAGTAATCTGAA
CATGGAGAGAAAAAAAAAAAAAAAAAAAAAAAACAACAACAACAACAACAACAACAACAACAACAACATT
ACTCACCCAGCTAGGAAATGCAGACCAGGTAGGTACTCTCTGACAAAGGTCACGCAGTATTCGAATGACA
ATCACACATGACTGGAGTCCATTAGCCCTAGCCTTCAGTGCAGTGAAGTCAAGATTAGTTAATGCACAAG
AGCAAAGAT