ZFLNCG03427
Basic Information
Chromesome: chr5
Start: 43889617
End: 43891656
Transcript: ZFLNCT05245 ZFLNCT05246
Known as: ENSDARG00000095304
Genome Browser
Express profile
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Express in top 10 samples
Sample | Tissue | Condition | FPKM |
---|---|---|---|
SRR594769 | blood | normal | 32.91 |
ERR023146 | head kidney | normal | 17.73 |
SRR1205166 | 5dpf | transgenic sqET20 and neomycin treated 3h | 15.92 |
ERR023145 | heart | normal | 14.45 |
SRR1647682 | spleen | normal | 13.19 |
SRR1205154 | 5dpf | transgenic sqET20 | 13.00 |
SRR1205151 | 5dpf | transgenic sqET20 and neomycin treated 1h | 12.83 |
SRR1205172 | 5dpf | transgenic sqET20 and neomycin treated 5h | 11.11 |
SRR1647684 | spleen | SVCV treatment | 10.21 |
SRR1562532 | spleen | normal | 9.55 |
Express in tissues
Correlated coding gene
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gene | correlation coefficent |
---|---|
timp2b | 0.61 |
cmtm3 | 0.58 |
rap1b | 0.57 |
LOC100536515 | 0.54 |
zgc:163057 | 0.54 |
LOC101886265 | 0.54 |
alas2 | 0.54 |
arpc4l | 0.54 |
lmo2 | 0.53 |
atf4b2 | 0.53 |
Gene Ontology
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GO | P value |
---|---|
GO:0048821 | 1.39e-04 |
GO:0061515 | 3.26e-04 |
GO:0030218 | 5.11e-04 |
GO:0035162 | 8.30e-04 |
GO:0061304 | 8.53e-04 |
GO:0061299 | 8.53e-04 |
GO:0030099 | 2.34e-03 |
GO:0006782 | 2.56e-03 |
GO:0046501 | 2.56e-03 |
GO:0003428 | 2.56e-03 |
GO:0005833 | 9.34e-03 |
GO:0005834 | 2.45e-02 |
GO:0005759 | 2.45e-02 |
GO:0070013 | 3.52e-02 |
GO:0043233 | 3.61e-02 |
GO:0031974 | 4.51e-02 |
GO:0004198 | 2.31e-04 |
GO:0003870 | 1.70e-03 |
GO:0004197 | 1.93e-03 |
GO:0004708 | 2.56e-03 |
GO:0008191 | 3.41e-03 |
GO:0008234 | 6.42e-03 |
GO:0016749 | 6.80e-03 |
GO:0004712 | 7.65e-03 |
GO:0016748 | 7.65e-03 |
GO:0005344 | 1.36e-02 |
KEGG Pathway
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Conservation
Zebrafish lncRNA Transcript | Human lncRNA Transcript | Mouse lncRNA Transcript | Methods |
---|---|---|---|
ZFLNCT05246 | ENST00000582320; NONHSAT052655; | NONMMUT010867; | Direct blastn |
OMIM
OMIM of this lncRNA gene hava does not exist!
Sequence Download
>ZFLNCG03427
ATAAATGCTGTACATGTGTTGTTCATGTTAGTAAATGCATTAACTAATGAACCTTATTGTAAAGTGTTAC
CAAAAAAATTATTATTACAGTTATTCTGCTTAAAATTTGTATTTCTTTTTGTAAACTGTATTACTATATA
TTTTTGAAGAATTTAAAACGTAAAAGAATCTTAATTATTTGCTGTCACTTTTGAGCAAAGTAATGCATCA
GTTTAAGAAGGGGTTAATTTCTTTAAAATTTACATAAGTTATGCTAAGTCTAAATGTTTGAGCGATAGTG
TGTGTTTATATTGTTAATTACACAACTGTTAAAATGTTTTTCTGTTAAATAATAATAAATATAGACTGTT
TATTTCATTTGTTTTGTCAGATTTTTTGAAACATGTGGAAAAAGACATTTAAAGTTCCTCTGCCTAGAGG
CTTAGATAACCTTTCTAATGCAGCAATGTACAATTCAGCTAACCCGCTGCTAAAGTGGCCTTTAAAATGG
TGATCAGATGCATTTATTTCCCATTTCTGCCCAGAACTCCATGATGAATCATACACTTAAACCTAAAGCA
GTGAGAGAGCCCTCGTTCTTTCTCTGTTTCCTTACTGGCCTTTAATCTTATTTCATTTGGCAGCAGCAGT
TAATGCTGAGTTCATTAAAGATGCTCGTTCATCTCGTCTTTGGCTCACAAACAAGCAACCTTTGTAAACC
TTTTGTGTAAAAGTGATGATCAAAAGTGGATCATATACAAAATTGTAGATAATAAATTGAAACAAGCAAA
GTAATTTCATATTCAGTGGCATTTATTAAAAGTATACAAAATAAAACATTTACAGGCTATAAGTGCTTGA
GATTAAAAGTTTAATGTGTTAGTTCAATACATGAGAAGTTTTCTTTTTCCACTTGAGATGTTCTTCGTTC
TCTTACATCCAGATGATTGTTGAGAAAAGGCAGCAGAACCCTTACCATTACTAAACTCAGTAATGGTAAC
GGTTTCGCCGCCTCTCTCTGTCACAGCGATTGTGTTTGTCCACAGGAAACCGTCAGAGGCTCGTTGACCC
CCTGGATAGTACATCATCTATACTGTAGTGTCTCAATAATGAACTTACAGTATACGATGATATCCTGTCT
AGAGAGCAAGATTAAAACAATCAAGTCTTTTTGTAGAAAATCAATTTAAATGACATTCATAACAGAAAAA
ATGCATCTAAAATCACATTTGACCACTGTCAAAAGTTTCAGAAACGTCCTTATTAGTGATCTATATGGTC
TAAATTAAAGAAGTTTCTTCCTGAGGAAGTTTTCTCCTGAATTCTTCACAGAATCACATTGAACTCTTCA
TCAGATGAGGAAGAGCATCTGCCGTCCCGTAGTTCGTAGTCACCACACTCACCTTTAGATGTGCGTCTTC
AGTCGTCCCGCAGGAAGTGTTGAAGAGCGGTTTAATTGCCTTCATCTGTCACCTTTACACGTCTTCTCAC
TTTTGTTTTCACATGTCTGTTGTCTCCATGCTGTGAAGTGATCGTAAACGTTGACTCCTCGCTCGTGAGT
TTTAATGCTCGCTGCTCATTTGCATATGATGACACACAAAGGCTGTGCCGTCCTTATCATGCATGTGCCC
TTCAGCCCACTGACCAATCAGATTCGTTCCCTGTATCAGACCCTGAACAGCACCAAGACTCGCACTTACG
CAAGTGTGTGTGACCCCACACCCAAACTTACCCACCCTCCAAAACACTTGAAATTCTACCAGAATAAATA
TCCCCCACCCAACAAACATATATGTTACGTTTATTTTATTACAATAAAAACATTAACTGGAGTTTTCAAA
CATTTTACAGTGTTTATATAAAATAATTTGATAATAACAACTTCTATTTAATTATATATAACATTATTTT
TGATAGTTTTTTTCATGACGTCATGTTTAAAAAAGTGCATTATAATAGTTTGTACACCAGTTTCCAGTGC
AGTTGTCAGTTGTATTACAATAAAATAAATAGAATGAAATAAAATATATTTTAATAAATTTGCAAATGAC
TCTCCAAAA
ATAAATGCTGTACATGTGTTGTTCATGTTAGTAAATGCATTAACTAATGAACCTTATTGTAAAGTGTTAC
CAAAAAAATTATTATTACAGTTATTCTGCTTAAAATTTGTATTTCTTTTTGTAAACTGTATTACTATATA
TTTTTGAAGAATTTAAAACGTAAAAGAATCTTAATTATTTGCTGTCACTTTTGAGCAAAGTAATGCATCA
GTTTAAGAAGGGGTTAATTTCTTTAAAATTTACATAAGTTATGCTAAGTCTAAATGTTTGAGCGATAGTG
TGTGTTTATATTGTTAATTACACAACTGTTAAAATGTTTTTCTGTTAAATAATAATAAATATAGACTGTT
TATTTCATTTGTTTTGTCAGATTTTTTGAAACATGTGGAAAAAGACATTTAAAGTTCCTCTGCCTAGAGG
CTTAGATAACCTTTCTAATGCAGCAATGTACAATTCAGCTAACCCGCTGCTAAAGTGGCCTTTAAAATGG
TGATCAGATGCATTTATTTCCCATTTCTGCCCAGAACTCCATGATGAATCATACACTTAAACCTAAAGCA
GTGAGAGAGCCCTCGTTCTTTCTCTGTTTCCTTACTGGCCTTTAATCTTATTTCATTTGGCAGCAGCAGT
TAATGCTGAGTTCATTAAAGATGCTCGTTCATCTCGTCTTTGGCTCACAAACAAGCAACCTTTGTAAACC
TTTTGTGTAAAAGTGATGATCAAAAGTGGATCATATACAAAATTGTAGATAATAAATTGAAACAAGCAAA
GTAATTTCATATTCAGTGGCATTTATTAAAAGTATACAAAATAAAACATTTACAGGCTATAAGTGCTTGA
GATTAAAAGTTTAATGTGTTAGTTCAATACATGAGAAGTTTTCTTTTTCCACTTGAGATGTTCTTCGTTC
TCTTACATCCAGATGATTGTTGAGAAAAGGCAGCAGAACCCTTACCATTACTAAACTCAGTAATGGTAAC
GGTTTCGCCGCCTCTCTCTGTCACAGCGATTGTGTTTGTCCACAGGAAACCGTCAGAGGCTCGTTGACCC
CCTGGATAGTACATCATCTATACTGTAGTGTCTCAATAATGAACTTACAGTATACGATGATATCCTGTCT
AGAGAGCAAGATTAAAACAATCAAGTCTTTTTGTAGAAAATCAATTTAAATGACATTCATAACAGAAAAA
ATGCATCTAAAATCACATTTGACCACTGTCAAAAGTTTCAGAAACGTCCTTATTAGTGATCTATATGGTC
TAAATTAAAGAAGTTTCTTCCTGAGGAAGTTTTCTCCTGAATTCTTCACAGAATCACATTGAACTCTTCA
TCAGATGAGGAAGAGCATCTGCCGTCCCGTAGTTCGTAGTCACCACACTCACCTTTAGATGTGCGTCTTC
AGTCGTCCCGCAGGAAGTGTTGAAGAGCGGTTTAATTGCCTTCATCTGTCACCTTTACACGTCTTCTCAC
TTTTGTTTTCACATGTCTGTTGTCTCCATGCTGTGAAGTGATCGTAAACGTTGACTCCTCGCTCGTGAGT
TTTAATGCTCGCTGCTCATTTGCATATGATGACACACAAAGGCTGTGCCGTCCTTATCATGCATGTGCCC
TTCAGCCCACTGACCAATCAGATTCGTTCCCTGTATCAGACCCTGAACAGCACCAAGACTCGCACTTACG
CAAGTGTGTGTGACCCCACACCCAAACTTACCCACCCTCCAAAACACTTGAAATTCTACCAGAATAAATA
TCCCCCACCCAACAAACATATATGTTACGTTTATTTTATTACAATAAAAACATTAACTGGAGTTTTCAAA
CATTTTACAGTGTTTATATAAAATAATTTGATAATAACAACTTCTATTTAATTATATATAACATTATTTT
TGATAGTTTTTTTCATGACGTCATGTTTAAAAAAGTGCATTATAATAGTTTGTACACCAGTTTCCAGTGC
AGTTGTCAGTTGTATTACAATAAAATAAATAGAATGAAATAAAATATATTTTAATAAATTTGCAAATGAC
TCTCCAAAA