LncRNA Gene

ZFLNCG03888

Basic Information

Chromesome: chr6

Start: 19379142

End: 19381006

Transcript: ZFLNCT05977 ZFLNCT05978

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR527835 tail normal 15.05
ERR023145 heart normal 7.47
SRR516132 skin male and 5 month 7.12
SRR1035978 13 hpf rx3-/- 6.99
SRR1035981 13 hpf rx3+/+ or rx3+/- 6.57
SRR594769 blood normal 6.49
SRR594771 endothelium normal 6.45
SRR658545 6 somite Gata6 morphant 5.12
SRR527833 5 dpf normal 5.01
SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 4.62
Express in tissues
Correlated coding gene Download
gene correlation coefficent
csnk1g2a 0.54
zgc:174651 0.51
Gene Ontology Download
GO P value
GO:0018105 3.77e-03
GO:0018209 4.05e-03
GO:0016055 8.53e-03
GO:0018193 1.71e-02
GO:0006468 3.34e-02
GO:0016310 4.55e-02
GO:0007166 4.73e-02
GO:0004674 2.00e-02
GO:0004672 3.47e-02
GO:0016773 4.02e-02
GO:0016301 4.72e-02
KEGG Pathway Download
KO P value
ko04341 5.27e-03
ko04340 8.05e-03
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT05978 ENST00000560291; Direct blastn
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG03888
TTGAACAACTGGAGAGAGTCGGTTTGTTTACCAATAAAGAAGTCAAGTGAGTATATCACTCGTGTTCATG
CGAACAGAAAAGATGGATTGAAATGGTGCTTCTGTAGAGAGAAAGTTTCCTCAAAAAGGGCTTTTGTTTC
AGGTCCATGTTGAAAAGATCTACTGCACTTGAATATAAGCTACACCGAGCAATTCAGTGTAAAGATGACT
TCATTACATACATACAGGTCAGTATTAACAAATAGCTTTTTGCACTTTAATGTAAGAAATCAGCACATTA
TGACCTTGTTTTTTTATCCTTGTAAAATCAGTTCGAAATAAACACTCTTGAACTTATCAAGAAGAGGAGA
GCGGTGAGTTGAAATCTGTTCTGTTATTTATTTATTTTGAAATCTGCTTCTTTCAGTAATCAGAACAGCA
GACCTAACTAACTTGTGTTACTTTAAGTGAGATGTACTGTTCTGCTTTCAGAGAATTGGTTACCATTTTA
AACGTGAAGAAATTGAGTATCCCATCATTCAGGGCATAAACAGTGTTTTCAGAAGGGCGACAAGCAAATG
GCAGGTTGGGCAATAAGAAATGATAACCTCAGTTTTAGATTCATTGTGATGGTCAGTTTTTGATTCAAAT
GTATTTTTGATTCCATTAAATGCTTCTCCTGTAGGAAGATGTGCAACTCTGGCTTTCTCATGTTGCCTTT
AATAAGAAATGGGTATGTGCTTTTGTTATTAAATGCAAAAAACCTTATCAATTTTAAAGAAATAAAAATA
GAAAGAAAGAAAGAAATAATAACGCAAATGTGTTTGTCTTTAAAAAAAAATCCTAATCTTTTTTTTTTTT
TTTTGTCTTTCAACAAGGGCTCAAAGACTCAGCTCAGCAAGATTTTGTTATCTATGTTAGCTATCCATCC
TGACAAACCAGGTAAACTTAAGTAAATTAGAAGTTTAGGGGTTGGGTTTACTGTCAATCATTAATATTAT
TGTAGTTTAGATGTATAAGCAGCTTTATACACATGGCTAGAAATAAAGTTTTTGGCGTTTTCTTGCAGCT
CTGTGGATAATGGCTGCTAAATGTGAAATGGAGGACAGGAACTCCTCAGAGAGTGCCCGGCATCTTTTCC
TCCGTGCCCTTCGCTTTCATCCAGAAAATAAGAAAGTCTACCTGGAGGTGAGGCAACATTATTTTTAAGC
AACCAATGCTATAAACATTACACTTTGAATCTCATATATACATAAAACAAACCATTGTATGTGTGTACAG
TATTTCCGGATGGAGCTCATGCATGCTGAGAAGATGAGGAAACAGCAACAGGAACTGGAGCAAGCTAAAA
TAGATGTGGTAGGTTAAAAAGGTGTACATCTGGAGTCCTTGCCTTTTTGAAAATAAAATGCATATTTTAA
TTCATAAAACATCTTTTCTAAATTCAGGGGGAATATCAGTTTTCTCCAGAAATCTTGAGTGGAAAACTTG
CTGAAGTGATATACAGAGATGCTGCACAGAAAATTAAAGGTTGGCTAAATTTCCACATAACTGTTTAATA
GTATCAGCTGTGTGTTGTTATAATGTGCTTATTTGTCTTGTCATCAGGGGCCGAATTCGTCTTGTCCCTG
CTACAGATCGCTGCCATCTTTGACTTCACAAAGGACCTACAAGACAAGATCCTGCAAGAGTACTGAGCCG
TTTCCCCTTTTGCCTTTTTACGTCTATATTGGCAATATGCAATCATGAAAATTTCTTTCTCAGACAACAT
GACATTGGAATTCTCTCTGTTCAGTCTGCAGAGTCAATATAGCGATGATTGCCTGATGTGGGATTTCATG
GCCAAGCGTGAGCTGGATTCTGCTGGTGCTCCAGAGCTGCAGTC