ZFLNCG04909
Basic Information
Genome Browser
Express profile
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Express in top 10 samples
Sample | Tissue | Condition | FPKM |
---|---|---|---|
SRR891504 | liver | normal | 11.02 |
SRR658539 | bud | Gata5/6 morphant | 6.51 |
SRR700534 | heart | control morpholino | 5.78 |
SRR658547 | 6 somite | Gata5/6 morphant | 5.62 |
SRR658533 | bud | normal | 5.49 |
SRR065197 | 3 dpf | U1C knockout | 5.27 |
SRR1205157 | 5dpf | transgenic sqET20 and neomycin treated 1h and GFP+ | 5.02 |
SRR658545 | 6 somite | Gata6 morphant | 4.96 |
SRR658535 | bud | Gata5 morphant | 4.60 |
SRR749514 | 24 hpf | normal | 4.60 |
Express in tissues
Correlated coding gene
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gene | correlation coefficent |
---|---|
LOC101882996 | 0.64 |
LOC101885379 | 0.64 |
notch2 | 0.63 |
zfp36l1a | 0.63 |
LOC101885604 | 0.62 |
zgc:64189 | 0.62 |
s1pr5b | 0.61 |
ripk1l | 0.59 |
arl11 | 0.59 |
far1 | 0.58 |
Gene Ontology
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GO | P value |
---|---|
GO:0001889 | 5.49e-05 |
GO:0007219 | 6.86e-05 |
GO:0048732 | 1.29e-04 |
GO:0060351 | 4.48e-04 |
GO:0048513 | 4.76e-04 |
GO:0007165 | 9.60e-04 |
GO:0007166 | 1.06e-03 |
GO:0060325 | 1.06e-03 |
GO:0043433 | 1.33e-03 |
GO:0060872 | 1.33e-03 |
GO:0030120 | 3.46e-03 |
GO:0030128 | 5.54e-03 |
GO:0005953 | 1.11e-02 |
GO:0030117 | 1.19e-02 |
GO:0030125 | 2.20e-02 |
GO:0030118 | 2.20e-02 |
GO:0030126 | 3.82e-02 |
GO:0030175 | 3.82e-02 |
GO:0005794 | 3.83e-02 |
GO:0019773 | 4.88e-02 |
GO:0005112 | 1.81e-04 |
GO:0038036 | 4.48e-04 |
GO:0097367 | 1.02e-03 |
GO:0035639 | 1.23e-03 |
GO:0001883 | 1.24e-03 |
GO:0032550 | 1.24e-03 |
GO:0032549 | 1.26e-03 |
GO:0001882 | 1.27e-03 |
GO:0045125 | 1.33e-03 |
GO:0032555 | 1.37e-03 |
KEGG Pathway
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Conservation
Zebrafish lncRNA Transcript | Human lncRNA Transcript | Mouse lncRNA Transcript | Methods |
---|---|---|---|
ZFLNCT07596 | rna40631; | Collinearity with conserved coding gene |
OMIM
OMIM of this lncRNA gene hava does not exist!
Sequence Download
>ZFLNCG04909
AGCACACATCAGTCATGCACACTGCCAACACACAGAGAGCAAGGAAACATTAGTGTAGTATATCCAGTGT
ATATAGCGGCGCCGCTGCAGTCATGTGTCCATCAGAGACTCCACTCTCACTCACACACGTGCTGGACTGA
TGCTGTAGCTGGAGTGTGGATGTGGGATGCTCAGCTCTCAGCTGCGCTGCGTATACGAAGTCTCGTAAAA
CCACAGACTGCACACTGAGATCAGTCTACTGCGAGCGCACGCTGGAGCTTCACCACATTACTCTCTATTC
TCTGAGTAATCAAGAGATCCTGAAATCCTCCACCAAAAACAGAGATCATCAGAGAAATGTTGGAGCTGCT
CTGACTAATGCTGGGGTCAGAGGTCCAGGTGTGTGTGTGTGTGTGTGTTCACTGACTGCTGTTCTTCTTC
TTCTTCAGTCGTTTGACTTCGGTATCGGGCAGGGCGCCGGCCTGGAGTCTCACGGTGAGTCTGACACTCT
ACTGTATCACACACACACACACACACACACACACACACACACACCGTGAGTGTTTTTAGGGGTACAATGT
GTGTGTGTTCTCAGGTGGCTCCACCTTCTGTGCCGTGGCGTCGCTGTGCATGATGGGAAAGCTGCAGGAG
GTGTTCAGCGAGCGTGAGCTGGGTCGTCTGCGCCGCTGGTGTGTGCTCCGACAGCAGAACGGCTTCCAGG
GACGACCCAACAAACCTGTGGACACCTGCTACTCCTTCTGGGTCGGGGCCACGCTGCAGGTGTGTGTGTG
TGTGTGTAAGTGTGTGTGTGTGTGAGTGTCTGTGTGTGTGTCTCTGTGTGTGTGTGTCTCTGTGTGTGTG
TGTGTGTAAGTGTGTGTGAGTTTGTGTGTCTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTCTCTGTGTGTCTCTCTGTGTGTGTTTGTGCGTGCGTGCGTGTTTGTCTGTGTCTGTGTGTGTGTGTC
CAGTTCAGTGTCAGTATGTTTGAACTCTGCAGCAAAGCAGCTTACTGAGTGTGTGAGAGCTGCATCAGAG
CAGAGCTCATTAATATTCACAACCATCCCAAATAAGGTCAATAATGGAGGCTATATTACAGTGCAGTAAA
GGAGTGCTCTACTGTTAATAACCGACTACACAGATTACTGCAGCGCAAATAAACTGATGTGTGTGTGTGT
GTGTTCTCTGTCTCCACAGCTGTTGGATGTGTTCCAGTACACAAACTTTGAGAAGAACCGGAACTATATT
CTGTCCACTCAGGACCGGCTGGTGGGCGGCTTCGCTAAATGGCCCGACAGTCACCCAGGTGAGATTACAG
CGGTTCTGTTTATCGTCAGCCGAAACCGCAGAGAAAGCCGATCCTGTAGAGCTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCCAGTTACTGAGGCTCTGATGTTTTCCATTCTCTCTCCA
TGACTGATAATCACGCTGACCTTATTTCCGCATCCGCTGGGCTTTATCCCGCTCTGCAGACGTGAACGGG
GGAATATTGAGTTACGCACACGCATAAAGAGACTAAATATGAGCGCAGGACACCGACACGACCTGTGTGA
GAGCAGTAACCCGACACACACTCATGACTGGAGGATAACACAGATATTAGCTGATCAGAACCGTGCAGGA
GGGCTAATGCTCAAACACATCAATAATGGAGCACACACACACACAAAGCAGCTGATTTTGTGCACACACA
CCTTCTGGAGGTGGAGAGAGACTGATGACATCACAGGGTTGTAATGAGGTCAGCGTGAATAATTAATGAG
CTGTTAAAGGCGCAGTGGTGTTTTACTGACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTAGACCCTCTCCACACCTACTTCGGCATCTGTGGTCTGTCCCTGATGGGTGAAGCGGGT
CTGCAGCCGGTGCACGCGGCGCTCAACATCAGCCTGCGGGCGTCCGACAGTCTGCGGCGGCTGCACGAGT
GCTGGAGGCGGAGCCGCACGTGACCCCTGACCCCTGCGCTGTCCAGCTCTGATACCTCACAGTCACACAC
ACACCCAGCATGATGAATTATTGATCACGCCAGCGCCCTCCGCCACTGCAGGATCAGCTTCATCATCATC
ATCATCATCAGTGCTGGACTCTGCCTTACAGACGCACACGCCGACGCCACCTACAGTCCAGCGCAGTGTT
TGCACTCTATAGCTGTGCTCTACTGTACACACACACACACACA
AGCACACATCAGTCATGCACACTGCCAACACACAGAGAGCAAGGAAACATTAGTGTAGTATATCCAGTGT
ATATAGCGGCGCCGCTGCAGTCATGTGTCCATCAGAGACTCCACTCTCACTCACACACGTGCTGGACTGA
TGCTGTAGCTGGAGTGTGGATGTGGGATGCTCAGCTCTCAGCTGCGCTGCGTATACGAAGTCTCGTAAAA
CCACAGACTGCACACTGAGATCAGTCTACTGCGAGCGCACGCTGGAGCTTCACCACATTACTCTCTATTC
TCTGAGTAATCAAGAGATCCTGAAATCCTCCACCAAAAACAGAGATCATCAGAGAAATGTTGGAGCTGCT
CTGACTAATGCTGGGGTCAGAGGTCCAGGTGTGTGTGTGTGTGTGTGTTCACTGACTGCTGTTCTTCTTC
TTCTTCAGTCGTTTGACTTCGGTATCGGGCAGGGCGCCGGCCTGGAGTCTCACGGTGAGTCTGACACTCT
ACTGTATCACACACACACACACACACACACACACACACACACACCGTGAGTGTTTTTAGGGGTACAATGT
GTGTGTGTTCTCAGGTGGCTCCACCTTCTGTGCCGTGGCGTCGCTGTGCATGATGGGAAAGCTGCAGGAG
GTGTTCAGCGAGCGTGAGCTGGGTCGTCTGCGCCGCTGGTGTGTGCTCCGACAGCAGAACGGCTTCCAGG
GACGACCCAACAAACCTGTGGACACCTGCTACTCCTTCTGGGTCGGGGCCACGCTGCAGGTGTGTGTGTG
TGTGTGTAAGTGTGTGTGTGTGTGAGTGTCTGTGTGTGTGTCTCTGTGTGTGTGTGTCTCTGTGTGTGTG
TGTGTGTAAGTGTGTGTGAGTTTGTGTGTCTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTCTCTGTGTGTCTCTCTGTGTGTGTTTGTGCGTGCGTGCGTGTTTGTCTGTGTCTGTGTGTGTGTGTC
CAGTTCAGTGTCAGTATGTTTGAACTCTGCAGCAAAGCAGCTTACTGAGTGTGTGAGAGCTGCATCAGAG
CAGAGCTCATTAATATTCACAACCATCCCAAATAAGGTCAATAATGGAGGCTATATTACAGTGCAGTAAA
GGAGTGCTCTACTGTTAATAACCGACTACACAGATTACTGCAGCGCAAATAAACTGATGTGTGTGTGTGT
GTGTTCTCTGTCTCCACAGCTGTTGGATGTGTTCCAGTACACAAACTTTGAGAAGAACCGGAACTATATT
CTGTCCACTCAGGACCGGCTGGTGGGCGGCTTCGCTAAATGGCCCGACAGTCACCCAGGTGAGATTACAG
CGGTTCTGTTTATCGTCAGCCGAAACCGCAGAGAAAGCCGATCCTGTAGAGCTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCCAGTTACTGAGGCTCTGATGTTTTCCATTCTCTCTCCA
TGACTGATAATCACGCTGACCTTATTTCCGCATCCGCTGGGCTTTATCCCGCTCTGCAGACGTGAACGGG
GGAATATTGAGTTACGCACACGCATAAAGAGACTAAATATGAGCGCAGGACACCGACACGACCTGTGTGA
GAGCAGTAACCCGACACACACTCATGACTGGAGGATAACACAGATATTAGCTGATCAGAACCGTGCAGGA
GGGCTAATGCTCAAACACATCAATAATGGAGCACACACACACACAAAGCAGCTGATTTTGTGCACACACA
CCTTCTGGAGGTGGAGAGAGACTGATGACATCACAGGGTTGTAATGAGGTCAGCGTGAATAATTAATGAG
CTGTTAAAGGCGCAGTGGTGTTTTACTGACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTAGACCCTCTCCACACCTACTTCGGCATCTGTGGTCTGTCCCTGATGGGTGAAGCGGGT
CTGCAGCCGGTGCACGCGGCGCTCAACATCAGCCTGCGGGCGTCCGACAGTCTGCGGCGGCTGCACGAGT
GCTGGAGGCGGAGCCGCACGTGACCCCTGACCCCTGCGCTGTCCAGCTCTGATACCTCACAGTCACACAC
ACACCCAGCATGATGAATTATTGATCACGCCAGCGCCCTCCGCCACTGCAGGATCAGCTTCATCATCATC
ATCATCATCAGTGCTGGACTCTGCCTTACAGACGCACACGCCGACGCCACCTACAGTCCAGCGCAGTGTT
TGCACTCTATAGCTGTGCTCTACTGTACACACACACACACACA