ZFLNCG05447
Basic Information
Genome Browser
Express profile
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Express in top 10 samples
Sample | Tissue | Condition | FPKM |
---|---|---|---|
SRR658533 | bud | normal | 0.73 |
SRR658547 | 6 somite | Gata5/6 morphant | 0.64 |
SRR372796 | bud | normal | 0.60 |
SRR658539 | bud | Gata5/6 morphant | 0.51 |
SRR658545 | 6 somite | Gata6 morphant | 0.35 |
SRR658543 | 6 somite | Gata5 morphan | 0.31 |
SRR065197 | 3 dpf | U1C knockout | 0.27 |
SRR658535 | bud | Gata5 morphant | 0.27 |
SRR800046 | sphere stage | 5azaCyD treatment | 0.25 |
SRR592701 | pineal gland | normal | 0.25 |
Express in tissues
Correlated coding gene
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gene | correlation coefficent |
---|---|
trim71 | 0.56 |
si:ch211-79l20.4 | 0.56 |
LOC799825 | 0.56 |
zgc:136308 | 0.54 |
chd4b | 0.54 |
tead1a | 0.54 |
nr6a1a | 0.54 |
fgfr1b | 0.54 |
nr2f6a | 0.53 |
prtga | 0.53 |
Gene Ontology
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GO | P value |
---|---|
GO:0009653 | 4.55e-07 |
GO:0048869 | 1.44e-05 |
GO:2000112 | 1.51e-05 |
GO:0010556 | 1.63e-05 |
GO:0010468 | 2.06e-05 |
GO:0031326 | 2.09e-05 |
GO:0009889 | 2.17e-05 |
GO:0051171 | 2.48e-05 |
GO:0035239 | 5.87e-05 |
GO:0014812 | 7.06e-05 |
GO:0071010 | 1.06e-03 |
GO:0005634 | 2.00e-03 |
GO:0070603 | 2.57e-03 |
GO:0070724 | 5.39e-03 |
GO:0044428 | 1.06e-02 |
GO:0000974 | 1.08e-02 |
GO:0005847 | 1.34e-02 |
GO:0071012 | 1.34e-02 |
GO:0071014 | 1.34e-02 |
GO:0005681 | 1.61e-02 |
GO:0003676 | 1.70e-08 |
GO:1901363 | 7.92e-07 |
GO:0097159 | 9.69e-07 |
GO:0005488 | 2.76e-04 |
GO:0003723 | 2.15e-03 |
GO:0043167 | 3.52e-03 |
GO:0001071 | 4.39e-03 |
GO:0003700 | 4.39e-03 |
GO:0000978 | 4.94e-03 |
GO:0046872 | 4.95e-03 |
KEGG Pathway
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Conservation
Zebrafish lncRNA Transcript | Human lncRNA Transcript | Mouse lncRNA Transcript | Methods |
---|---|---|---|
ZFLNCT08427 | NONMMUT084326; | Direct blastn |
OMIM
OMIM of this lncRNA gene hava does not exist!
Sequence Download
>ZFLNCG05447
ATGCACTCATTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACTCATACACTACGGTCAGTTCAGTTCATCAATTCCCACGCCAACACAGGGAGAACATGCAAAC
TCAATGACCCAGCCGGGACTCAAACCAGTGACCTTCTTGCTGTGAGGCCCCAGTGCTAACCACTGAGCCA
CTGTGCTGCCTATGACCCGACATGTATTTGGAAAATGTTTTACACAAAGTAGAAGCGAGTGAAACTGACA
AATAACTCAAAGGAAGTCATCATGAATCAATACTACATTTACTAAATATACTAAACTAAAATTAGAAATG
AAAAGAAACGAGTGCTCTAAACATGCTGGGTTGTTTTAATGTTGGGTCAAATATGGACTAATATGATTAC
ATTTTCAAATGAAATGAAGATGTATCTTTTGAACCCAGCTGTTTGGTTTTGCCCACATTTTACCTTATTT
TATTTTCTACAACAAGCAGCAGCAGCAGCCAGCAAACATGTGAAGTTTGACAAAAATTTTTAAAGAAAGT
CAGAATGAATTAGCAGTAAAGAGACTCATATAAATGTAAATAATAAAGTACACTATACATGCAGAGTTGT
TTTAACCCAATGTTGGGTCAAACATTCACAAACACGACCATTGGGTTCGTTTAAAATTAGATTTAGATTA
CACTGTTGAACCCAAGTGTTAGTTTGTCCATATTTGACCCAGTGTTGGATTGACCCAACATTCATTCTTT
CATTCATTCATTTTCTTGTCGGCTCAGTCCCTTTATTAATCTGGGGTCGCCACAGCGGAATGAACCGCCA
ACTTATCCAGCACGTTTTTTACATAGCGGATGCCCTTCCAGCAGCAACCCATCTCTGGGAAACACCCACA
CACACACACACACATACACACACAAACATACACTCGTACTCTTCAGAAAATTTAGCCTACCCAATTCATC
TGTACTGCATGTCTTTGGACTGTGGGGGAAACCCACGCGAACGCTGGGAGAACATGCAAACTACACACAG
AAACGCCAACTGAGCCGAGGTTCAAACATTTCTTAGGAAAAAAAAAGTGTACACAAAGCAGCAGCAGCGA
GTAAAAATGTGAAATTTGCTAAATAATTAAAAAAAAAAGTCATAATGAATCTGTACTAATGTACTGAAAT
AAAATTGGAGATGAAAAAAGTAGACTATAAATGCTGGGTTGTTTTAACTTAATGTTGGGTCAAAGATTGA
GAAACAGCCATTGGGTTCATATTTAAAATTAGATTTAGATTACACTATTGAACCCAACTGTTGGTTTTGC
CATATTTGACCCAGTGTTGGATTGACCCAACATTTCTAAGGATAAATATATATTTACACTAGTAAACATT
TTAATTTTGACAAATAATTCAAAGTAAGTCATAATGAATCAGCACTAAATGTACTGAAATACAACTAGAA
ATGAAAAGAAACGAGTGCTCTAAACATGCTGGGTTGTTTTAACCCAATGTTGGGTCAAATATGGACTAAT
ATGATTACATTTTAAAATTAAAATTAGATTAATCTTTTGAACCCAGCTGTTTGGTTTTGTCCACATTTGA
CCTTATTTTATTTTCTACACAAAGCAGCAGCAGCCGGTACAAATGTGAAGTTTGAGAAATAGTTTAGAGA
AGGTCATATTGAATTAGCGGTAAAGAGACTCAAATAAATGTTGACATGAAAAGAAATTTACTCTGTATAA
AATGCTGGGTGGTTTTAACCTCATGTTGGGTCAAATATAGAGAAACTCGACCATTGGGTTCATTTTTAAT
ATAAAATTTTGATTCATCTTTTGAACCCAACTCTTAGCTTTGTCCATATTTGACCCAGTGTTGGATTGAC
CCAACATTTCTTAGCAATTATTTTCTACACAAAGCAGCAGCGGCGAGTAAAAATGTGAATTTTGACAAAC
AATTTAAAGAAAGTCAGAATGAATTAGCAGTAAAGAGACTCATAAATGTAAATAATAAAGTACACTATAC
ATGCAGAGTTGTTTTAACCCAATGTTGGGTCAAATATTGACAAACACGACCATTGGGTTCATTTAAAATT
AGATTTAGATTACACTTTTGAGCCCAACTGTTAGCTTTGTCCACATCTGACCCAGTGTTGGATTGACCCA
ACATTCATTCTTTCATTCATTCATTTTCTTGTTGGCTTAGTTCCTTTATTAATCCACAGCAGAATGAACC
GCCAACTTATCCAGCACGTTTTTTACGTAGTGGATGCCTTTCCAGCTGCAACCCATCTCTGGGAAACATC
CACACACACACACACACACACACACACACACACACACACACAAACACACACACACACTCATACACTACGG
AAAATTTAGGCTACCCAATTCATCTGTACCG
ATGCACTCATTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACTCATACACTACGGTCAGTTCAGTTCATCAATTCCCACGCCAACACAGGGAGAACATGCAAAC
TCAATGACCCAGCCGGGACTCAAACCAGTGACCTTCTTGCTGTGAGGCCCCAGTGCTAACCACTGAGCCA
CTGTGCTGCCTATGACCCGACATGTATTTGGAAAATGTTTTACACAAAGTAGAAGCGAGTGAAACTGACA
AATAACTCAAAGGAAGTCATCATGAATCAATACTACATTTACTAAATATACTAAACTAAAATTAGAAATG
AAAAGAAACGAGTGCTCTAAACATGCTGGGTTGTTTTAATGTTGGGTCAAATATGGACTAATATGATTAC
ATTTTCAAATGAAATGAAGATGTATCTTTTGAACCCAGCTGTTTGGTTTTGCCCACATTTTACCTTATTT
TATTTTCTACAACAAGCAGCAGCAGCAGCCAGCAAACATGTGAAGTTTGACAAAAATTTTTAAAGAAAGT
CAGAATGAATTAGCAGTAAAGAGACTCATATAAATGTAAATAATAAAGTACACTATACATGCAGAGTTGT
TTTAACCCAATGTTGGGTCAAACATTCACAAACACGACCATTGGGTTCGTTTAAAATTAGATTTAGATTA
CACTGTTGAACCCAAGTGTTAGTTTGTCCATATTTGACCCAGTGTTGGATTGACCCAACATTCATTCTTT
CATTCATTCATTTTCTTGTCGGCTCAGTCCCTTTATTAATCTGGGGTCGCCACAGCGGAATGAACCGCCA
ACTTATCCAGCACGTTTTTTACATAGCGGATGCCCTTCCAGCAGCAACCCATCTCTGGGAAACACCCACA
CACACACACACACATACACACACAAACATACACTCGTACTCTTCAGAAAATTTAGCCTACCCAATTCATC
TGTACTGCATGTCTTTGGACTGTGGGGGAAACCCACGCGAACGCTGGGAGAACATGCAAACTACACACAG
AAACGCCAACTGAGCCGAGGTTCAAACATTTCTTAGGAAAAAAAAAGTGTACACAAAGCAGCAGCAGCGA
GTAAAAATGTGAAATTTGCTAAATAATTAAAAAAAAAAGTCATAATGAATCTGTACTAATGTACTGAAAT
AAAATTGGAGATGAAAAAAGTAGACTATAAATGCTGGGTTGTTTTAACTTAATGTTGGGTCAAAGATTGA
GAAACAGCCATTGGGTTCATATTTAAAATTAGATTTAGATTACACTATTGAACCCAACTGTTGGTTTTGC
CATATTTGACCCAGTGTTGGATTGACCCAACATTTCTAAGGATAAATATATATTTACACTAGTAAACATT
TTAATTTTGACAAATAATTCAAAGTAAGTCATAATGAATCAGCACTAAATGTACTGAAATACAACTAGAA
ATGAAAAGAAACGAGTGCTCTAAACATGCTGGGTTGTTTTAACCCAATGTTGGGTCAAATATGGACTAAT
ATGATTACATTTTAAAATTAAAATTAGATTAATCTTTTGAACCCAGCTGTTTGGTTTTGTCCACATTTGA
CCTTATTTTATTTTCTACACAAAGCAGCAGCAGCCGGTACAAATGTGAAGTTTGAGAAATAGTTTAGAGA
AGGTCATATTGAATTAGCGGTAAAGAGACTCAAATAAATGTTGACATGAAAAGAAATTTACTCTGTATAA
AATGCTGGGTGGTTTTAACCTCATGTTGGGTCAAATATAGAGAAACTCGACCATTGGGTTCATTTTTAAT
ATAAAATTTTGATTCATCTTTTGAACCCAACTCTTAGCTTTGTCCATATTTGACCCAGTGTTGGATTGAC
CCAACATTTCTTAGCAATTATTTTCTACACAAAGCAGCAGCGGCGAGTAAAAATGTGAATTTTGACAAAC
AATTTAAAGAAAGTCAGAATGAATTAGCAGTAAAGAGACTCATAAATGTAAATAATAAAGTACACTATAC
ATGCAGAGTTGTTTTAACCCAATGTTGGGTCAAATATTGACAAACACGACCATTGGGTTCATTTAAAATT
AGATTTAGATTACACTTTTGAGCCCAACTGTTAGCTTTGTCCACATCTGACCCAGTGTTGGATTGACCCA
ACATTCATTCTTTCATTCATTCATTTTCTTGTTGGCTTAGTTCCTTTATTAATCCACAGCAGAATGAACC
GCCAACTTATCCAGCACGTTTTTTACGTAGTGGATGCCTTTCCAGCTGCAACCCATCTCTGGGAAACATC
CACACACACACACACACACACACACACACACACACACACACAAACACACACACACACTCATACACTACGG
AAAATTTAGGCTACCCAATTCATCTGTACCG