LncRNA Gene

ZFLNCG05516

Basic Information

Chromesome: chr9

Start: 1943820

End: 1946722

Transcript: ZFLNCT08533

Known as: ENSDARG00000094186

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
ERR023143 swim bladder normal 2.23
SRR527832 16-36 hpf normal 0.96
SRR800045 muscle normal 0.94
SRR372798 28 hpf normal 0.93
SRR749514 24 hpf normal 0.91
SRR1035981 13 hpf rx3+/+ or rx3+/- 0.80
SRR038624 embryo traf6 morpholino and bacterial infection 0.71
SRR372800 2 dpf normal 0.69
SRR658547 6 somite Gata5/6 morphant 0.68
SRR065197 3 dpf U1C knockout 0.63
Express in tissues
Correlated coding gene Download
gene correlation coefficent
hoxb1b 0.71
hoxd4a 0.69
hoxa9b 0.68
hoxc6b 0.67
hoxb1a 0.66
frem1b 0.66
pax3b 0.65
meis3 0.65
hoxb9a 0.65
ptch2 0.65
Gene Ontology Download
GO P value
GO:0001708 1.08e-11
GO:0003002 2.83e-11
GO:0007411 2.86e-11
GO:0097485 3.34e-11
GO:0007389 4.09e-11
GO:0048562 5.73e-11
GO:0030154 6.00e-11
GO:0048598 6.41e-11
GO:0031290 6.82e-11
GO:0009653 6.93e-11
GO:0005634 1.71e-10
GO:0043226 1.85e-10
GO:0043229 2.18e-10
GO:0043231 2.31e-10
GO:0043227 2.63e-10
GO:0044424 6.50e-06
GO:0044421 8.82e-06
GO:0005578 1.10e-05
GO:0031012 1.31e-05
GO:0044464 1.42e-05
GO:0001071 1.09e-10
GO:0003700 1.09e-10
GO:0043565 1.31e-10
GO:0003677 1.68e-10
GO:0003676 1.75e-10
GO:1901363 1.97e-10
GO:0097159 2.27e-10
GO:0005488 3.06e-10
GO:0046983 4.53e-05
GO:0005215 1.12e-04
KEGG Pathway Download
KO P value
ko05217 1.88e-14
ko05205 2.34e-10
ko04340 2.16e-08
ko05200 6.41e-08
ko04550 2.65e-07
ko04390 1.56e-06
ko05224 1.39e-05
ko04950 2.35e-05
ko04360 9.38e-05
ko05202 1.37e-04
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT08533 ENST00000513533; ENST00000439545; ENST00000481995; ENST00000548801; ENST00000518046; ENST00000518088; ENST00000613383; ENST00000523364; ENST00000429755; ENST00000467897; ENST00000508688; ENST00000613939; ENST00000512427; ENST00000620092; ENST00000616712; ENST00000617934; ENST00000425358; ENST00000521197; ENST00000615604; ENST00000521231; ENST00000464382; ENST00000602610; ENST00000523790; ENST00000518848; ENST00000622675; ENST00000619974; ENST00000434063; ENST00000479766; ENST00000465846; ENST00000611352; ENST00000466037; ENST00000517635; ENST00000455246; ENST00000524304; ENST00000513165; ENST00000520395; ENST00000492897; ENST00000460041; ENST00000426965; ENST00000523331; ENST00000480872; ENST00000509870; ENST00000505700; ENST00000593300; ENST00000521159; ENST00000520360; ENST00000440016; ENST00000619311; ENST00000519935; ENST00000477144; ENST00000518947; ENST00000428939; ENST00000435312; ENST00000512206; ENST00000416928; ENST00000425595; ENST00000521687; ENST00000524048; ENST00000474040; ENST00000517641; ENST00000502764; ENST00000491264; ENST00000429611; ENST00000474324; ENST00000562848; ENST00000498652; ENST00000604081; ENST00000467155; ENST00000514702; ENST00000519694; ENST00000517550; ENST00000476204; ENST00000453875; ENST00000593438; ENST00000522863; ENST00000495032; ENST00000494420; ENST00000522193; ENST00000487849; ENST00000504972; ENST00000620211; ENST00000522674; ENST00000620901; ENST00000567780; ENST00000424518; rna84770; rna84761; rna110524; rna110493; rna110537; rna84762; rna20465; rna20463; rna20461; rna51654; rna110529; rna20470; rna20459; rna110526; rna20469; rna20462; rna110528; rna110538; rna20468; rna84765; rna20467; rna110530; rna51647; rna51632; rna20460; rna51645; rna51633; rna51652; rna110525; rna84763; rna51650; rna20466; rna20444; rna84771; rna20464; NONHSAT054421; NONHSAT028514; NONHSAT075627; NONHSAT211837; NONHSAT028528; NONHSAT119677; NONHSAT119697; NONHSAT183137; NONHSAT119670; NONHSAT175307; NONHSAT119672; NONHSAT119682; NONHSAT075636; NONHSAT054434; NONHSAT119698; NONHSAT028529; NONHSAT163579; NONHSAT175305; NONHSAT119702; NONHSAT119704; NONHSAT054411; NONHSAT028518; NONHSAT119680; NONHSAT119706; NONHSAT054437; NONHSAT054405; NONHSAT185941; NONHSAT028510; NONHSAT211840; NONHSAT119687; NONHSAT119664; NONHSAT211839; NONHSAT211844; NONHSAT054435; NONHSAT054444; NONHSAT028530; NONHSAT054450; NONHSAT054401; NONHSAT119711; NONHSAT119684; NONHSAT119665; NONHSAT211838; NONHSAT028511; NONHSAT185938; NONHSAT119675; NONHSAT054441; NONHSAT185937; NONHSAT119678; NONHSAT054449; NONHSAT119667; NONHSAT175306; NONHSAT119669; NONHSAT163580; NONHSAT119673; NONHSAT054406; NONHSAT054433; NONHSAT211835; NONHSAT054403; NONHSAT211834; NONHSAT213318; NONHSAT175303; NONHSAT119693; NONHSAT028509; NONHSAT119683; NONHSAT119703; NONHSAT054442; NONHSAT075630; NONHSAT054443; NONHSAT119705; NONHSAT054446; NONHSAT028539; NONHSAT075637; NONHSAT028527; NONHSAT075638; NONHSAT119688; NONHSAT119700; NONHSAT119710; NONHSAT175308; NONHSAT028507; NONHSAT211842; NONHSAT119708; NONHSAT211843; NONHSAT211836; NONHSAT028531; NONHSAT185940; NONHSAT163581; NONHSAT054427; NONHSAT054408; NONHSAT054431; NONHSAT163582; NONHSAT028517; NONHSAT119709; NONHSAT028512; NONHSAT175304; NONHSAT119674; NONHSAT028541; NONHSAT119696; NONHSAT054407; NONHSAT213319; NONHSAT054454; NONHSAT119685; NONHSAT119690; NONHSAT119668; NONHSAT119676; NONHSAT028519; NONHSAT054432; NONHSAT211841; NONHSAT119666; NONHSAT028513; NONHSAT028516; NONHSAT119707; ENSMUST00000183562; ENSMUST00000150698; ENSMUST00000185194; ENSMUST00000136302; ENSMUST00000134512; ENSMUST00000185090; ENSMUST00000126966; ENSMUST00000143191; ENSMUST00000152462; ENSMUST00000184301; ENSMUST00000137729; ENSMUST00000131502; ENSMUST00000128562; ENSMUST00000184566; ENSMUST00000190845; ENSMUST00000145799; ENSMUST00000132326; ENSMUST00000152027; ENSMUST00000184104; ENSMUST00000200824; ENSMUST00000100000; ENSMUST00000156515; ENSMUST00000140952; ENSMUST00000156342; ENSMUST00000147174; ENSMUST00000139005; ENSMUST00000141850; ENSMUST00000184302; ENSMUST00000154027; rna35395; rna35407; rna35414; rna10234; rna35403; rna10228; rna10235; NONMMUT085706; NONMMUT037975; NONMMUT037989; NONMMUT056965; NONMMUT037980; NONMMUT056968; NONMMUT037983; NONMMUT037993; NONMMUT056957; NONMMUT056950; NONMMUT056969; NONMMUT085709; NONMMUT037973; NONMMUT037986; NONMMUT037974; NONMMUT122276; NONMMUT037979; NONMMUT037976; NONMMUT037987; NONMMUT037992; NONMMUT056966; NONMMUT056970; NONMMUT011703; NONMMUT056953; NONMMUT056971; NONMMUT037977; NONMMUT056955; NONMMUT085710; NONMMUT085707; NONMMUT011705; NONMMUT107327; NONMMUT037978; NONMMUT056952; NONMMUT011706; NONMMUT056954; NONMMUT056959; NONMMUT109225; NONMMUT107329; NONMMUT085708; NONMMUT037990; NONMMUT107328; NONMMUT109226; NONMMUT037982; NONMMUT011701; NONMMUT056960; NONMMUT056967; NONMMUT037988; NONMMUT056961; Collinearity with conserved coding gene
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG05516
GTATATATAGACGACGGCATATATTCACCAACTGACCAAAAATATCGAGAAAAAAGGCTTAATTTCTCAA
CGTACAATTAAGCCATTAAACTGTTTTCTCTTAGGTTTTCATGAAATTTAATATCATGTCCATGGTACTC
GTGGTGCTTAAAAAATCTATTATAATACCCAACATGTTCCATAGCGAAGACATATTTTCAGAAGGAGCTC
TCTCATAGCATTATGTCTCAGACCTAATATTTAAATCCGACTACTAATTATAACTAAATAATTTGTTCAT
TCGATAAATCTAAAAAAAAAAAAAAAAAAAAAACACACACACACACACACACAAGTACAACTGAAATCAT
AATCCGCCAGGTGAGGATTGAAGACGTACATGCTACTCACTCTGTGATGTGCCATGGCAAGCAAATTGAT
CAGGTGGTCTCAAAACTGTGCGTGAAGAAGCATATAAAGGAAGGGTAAAGGTCGACGGGTCAAGCCGAAT
CATTTACAACACACATCACAATGTTTCATTATTTTTTGTAAGTCGACAGCAGTAGCGGAAAAGGAGGAAA
GTTCATGGATAATACATGACCTCTTCTGATAAGCAGCTAATGTGGCCCACCGCGCCTGTTCAGAGACAGG
CTTCTTCAAAAGCTTGTAGTCTTAAAAAATATTAGCATCTAGAACTAATAATTATCAATCTAATTATATC
GTTTAATTTGATTAACACTGACGCTAACCTCATTTTTTTTCTACAGGAGTATTTAACATGATTTAAAAAT
ATCAGCAAAGCCACACGAGAAACACATCAACATATTTTAAATTTGCATTCAATAATTTGCAAAGTATAAC
AACATTATGCGTGATGTTTTACTACTTAATAGTGATTATAGCATTTTAGCATACAAATAAATAGTAAATT
TTAAAAGACGCAAAGGCTTTATAATTCTGGCGGCCTTTCGCTCTTTATATAAGATAAATATAATATTAGA
TTTTTTGTGTGCGTTTTTATTATCACATGTACCCAGTTAATATTTTTCTTTCTATTTTAAATAAGACATG
TGAATCTTATCTATTTTGTTAGACAGCGTGACCTGTGTTTCACCTTGAATTGCGACTTGTTCAGGCGGGT
CAAAGCCGAGTTACTGAACAAAAGAATTAGAGAGTCATCATTTCTATTAAACTCTAAGTTACGCTTAAAT
AAAACGACCTTATGTTGATTTTAATTTATATATTTGTGCATGCACCTTTATATAAGTCGTATCCGTGCAT
ATAGGGTGAAAATGATTAAATTTTCCAGTTAACTAAGTTGGAAATGTATACGCTTGTAGATTTCTAGGTT
TAGATAGGTCATTGTTTATTAATCGATATGTTATTGTTTAGTACGATATTTTATACTTATACAAAAAGTT
ATCTATATAAAAAGAAAATAAGTTATAGAACGATGAAATATAGTTATTTCCCCATTCAAGTGTTTTACTA
ATATTAAACATTTTAAAAATACACATATTTTTTATTGTTTATAGACTTCACAGTTATAACTCAATAATTA
AATAGCACGCAATCGTCATTCAGCTGATATAATGTTTGGCTAAAGCAGTGGCTAAATTATTATGTTTGTA
TTTACCTTTATAATATGAACATAATTTAATTGCTATTCTTAATCCAAAGCATTTAATACAGGTATTAATT
ATCATGGCTTTCTAAGCAGACAGTGTTTATTTAAATTTAAATATAATTATTAAAATAAAGTATAAATAAC
GACAGAAATGACTCTTTTGCCTGGGGGCGCTAGAGAGCTTGTCAATATAACCCCGAAAACCTGCTTATTA
AAGTTCACTTATAATCCAGGGAAGTGCGTGTATAGTTCAATTCAATTCATCTTTATTTCTACAGCGCTTT
TACAATGTAGATTGTGCCAAAGCAGTTTAACATAGATGTTCTAGATAATTGAAACTGTGTCAGTACAGGT
TTCAGAGTTAATAGTGAATAAATAGACTACTACTTCGTTTTGTCACATTTAATTCTGCACATAAAGCCCC
GCAAAACAACCTGTAAAGTTGTGACTCTAATTTGTAAATCAAATGCAAAGCAAAACATTTATATATACCA
TATAGACTAATATAAAACATTCAATGTAGTGCAGTCGTATTTATAAATACAGTCAGCAAAAGACTACTCT
AAATATATGCGTATTTCACACTCTGAAGTCATTATAGACTGCAATAATATTTGACATATTAAACATTCCC
AAGGCTTTTAAATAATTGCATTTTAATACATTTAGTGCATTTTAAGAAATAATATTAATAATAACAGCAA
CAATTCGATACAAGAAAACCCCCCAAGAGCAAAGGAAACGATCTTTCATAACGTGGCGCCACAACTGCAT
CAAAAACGGACTACTGCATAACATTTACGTCATCTCCATTACAACCATTTTTCCCCCTCTCCATAGTTAT
CCAACCACCCAAAGCTGCGCAACAACACACGATGAGTTCACAGAAACAAACCAGAGCTGGCTTTGAAGGC
TGACTTTAGCTTTGTGAAACCACAGCAAACATCACAGCACAATTCAGCCAAGTTCACTGAACCCAAGCTT
ACCTCCAGAAGCAGGCGTATCTCCAAAAACGCATCGGCAAATTTGTATATCCATGATCAAAATACGCGTG
GAGCGTCTTTCCTCGGCGGCGATGCTGGGATCTTTTCTAAAACCGTCTGAACGACCTTTCTAATATACAA
TGTGAATTATATTTTGGCTTGTCAACTCCCTGGCCATAAAACAAAGTTTAATGGTATCACGTGCTTCCCC
ACAGCCATTCATGACAGCGCGCGGGTGCCATAAATAATCCTGAAAGTTGCACTTATTCAATAATGGCGAT
TACTCTGATCTCAGGAGGAAATAAAGACACGG