ZFLNCG06689
Basic Information
Chromesome: chr11
Start: 12269798
End: 12270092
Transcript: ZFLNCT10251
Known as: ENSDARG00000087774
Genome Browser
Express profile
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Express in top 10 samples
| Sample | Tissue | Condition | FPKM |
|---|---|---|---|
| SRR800046 | sphere stage | 5azaCyD treatment | 6521.04 |
| SRR800037 | egg | normal | 5902.34 |
| SRR800049 | sphere stage | control treatment | 3968.55 |
| SRR800043 | sphere stage | normal | 3850.19 |
| SRR800045 | muscle | normal | 2265.41 |
| SRR801556 | embryo | RPS19 and p53 morpholino | 1492.61 |
| SRR801555 | embryo | RPS19 morpholino | 383.36 |
| SRR886457 | 512 cell | 4-thio-UTP metabolic labeling | 324.10 |
| SRR535986 | larvae | nhsl1b mut | 252.07 |
| SRR886455 | 128 cell | 4-thio-UTP metabolic labeling | 162.82 |
Express in tissues
Correlated coding gene
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| gene | correlation coefficent |
|---|---|
| LOC100329422 | 0.62 |
| LOC100000930 | 0.62 |
| LOC565028 | 0.61 |
| LOC100333437 | 0.61 |
| LOC565202 | 0.60 |
| LOC560910 | 0.58 |
| si:ch211-113a14.7 | 0.58 |
| si:ch211-113a14.18 | 0.57 |
| LOC100334741 | 0.57 |
| si:ch211-113a14.16 | 0.57 |
Gene Ontology
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| GO | P value |
|---|---|
| GO:0006325 | 2.34e-07 |
| GO:0006334 | 5.03e-07 |
| GO:0034728 | 1.26e-06 |
| GO:0065004 | 2.04e-06 |
| GO:0071824 | 3.97e-06 |
| GO:0006342 | 7.46e-06 |
| GO:0045814 | 1.18e-05 |
| GO:0051673 | 1.23e-05 |
| GO:0040029 | 2.23e-05 |
| GO:0043933 | 3.51e-05 |
| GO:0000786 | 1.06e-12 |
| GO:0044815 | 2.21e-12 |
| GO:0032993 | 5.02e-12 |
| GO:0005694 | 2.76e-11 |
| GO:0044427 | 1.55e-10 |
| GO:0043228 | 9.78e-07 |
| GO:0043232 | 9.78e-07 |
| GO:0005634 | 2.83e-06 |
| GO:0000790 | 3.40e-05 |
| GO:0044454 | 4.60e-05 |
| GO:0003677 | 2.40e-08 |
| GO:0046982 | 4.34e-08 |
| GO:0003676 | 1.24e-07 |
| GO:0046983 | 1.38e-07 |
| GO:1901363 | 3.40e-06 |
| GO:0097159 | 4.02e-06 |
| GO:0016712 | 1.29e-03 |
| GO:0008395 | 3.20e-03 |
| GO:0030628 | 4.12e-03 |
| GO:0008187 | 4.12e-03 |
KEGG Pathway
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Conservation
| Zebrafish lncRNA Transcript | Human lncRNA Transcript | Mouse lncRNA Transcript | Methods |
|---|---|---|---|
| ZFLNCT10251 | ENST00000411759; NONHSAT176187; NONHSAT176254; NONHSAT176198; NONHSAT176955; NONHSAT176191; NONHSAT053996; NONHSAT176199; NONHSAT176193; NONHSAT176189; NONHSAT176188; NONHSAT053631; NONHSAT163560; NONHSAT176196; NONHSAT053995; NONHSAT176190; NONHSAT175207; NONHSAT176195; NONHSAT175206; NONHSAT053988; NONHSAT053990; NONHSAT176194; NONHSAT176255; NONHSAT176192; | Collinearity with conserved coding gene |
OMIM
OMIM of this lncRNA gene hava does not exist!
Sequence Download
>ZFLNCG06689
GTCTGCGTCTCTCTGTGTTGCTCAGGCTGCACTGCAGTGTCTATTCACAGGCGCGATCCCACTACTGATT
GGCACGGGGGATTTGACCTGCTCCGTCTCCGACCTGGGCCGGTTCACCCCTCCTTAAACAACCTGGTGGT
CCCAAGCTCCCCTAGGAGCACCATATCGATACCGAACTTAGCGTGGACACCCGCTCAACATAGTCCACTG
CAGCCCAGAAGCCCTGAACTCAAGCGATTCGCAGCCTCAGCCTCCCAGTAGCTTGGATTACAGGCGCGCG
CCACTGCACCCGGC
GTCTGCGTCTCTCTGTGTTGCTCAGGCTGCACTGCAGTGTCTATTCACAGGCGCGATCCCACTACTGATT
GGCACGGGGGATTTGACCTGCTCCGTCTCCGACCTGGGCCGGTTCACCCCTCCTTAAACAACCTGGTGGT
CCCAAGCTCCCCTAGGAGCACCATATCGATACCGAACTTAGCGTGGACACCCGCTCAACATAGTCCACTG
CAGCCCAGAAGCCCTGAACTCAAGCGATTCGCAGCCTCAGCCTCCCAGTAGCTTGGATTACAGGCGCGCG
CCACTGCACCCGGC