LncRNA Gene

ZFLNCG08486

Basic Information

Chromesome: chr15

Start: 20729166

End: 20731651

Transcript: ZFLNCT13056

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 432.99
SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 47.82
SRR065196 3 dpf normal 45.72
SRR065197 3 dpf U1C knockout 37.45
SRR726542 5 dpf infection with control 36.95
SRR1004789 larvae impdh2 morpholino 36.05
SRR038625 embryo traf6 morpholino 34.31
SRR726541 5 dpf infection with Mycobacterium marinum 32.81
SRR726540 5 dpf normal 32.26
SRR038627 embryo control morpholino 26.96
Express in tissues
Correlated coding gene Download
gene correlation coefficent
lamtor1 0.65
si:dkey-20i20.2 0.61
zgc:174651 0.60
zgc:103755 0.60
si:dkey-159f12.2 0.59
nr5a1a 0.59
ptger1c 0.58
fgf17 0.58
zgc:171551 0.57
helq 0.56
Gene Ontology Download
GO P value
GO:0032439 9.24e-04
GO:0030728 1.85e-03
GO:0043401 2.16e-03
GO:0009755 2.57e-03
GO:0032008 3.69e-03
GO:0001919 4.61e-03
GO:0042632 6.45e-03
GO:0055092 6.45e-03
GO:0042664 7.37e-03
GO:1903225 7.37e-03
GO:0071986 4.61e-03
GO:0031902 1.10e-02
GO:0045121 1.65e-02
GO:0098857 1.65e-02
GO:0090575 3.19e-02
GO:0010008 3.72e-02
GO:0044798 3.72e-02
GO:0044440 4.79e-02
GO:0003676 1.51e-03
GO:0004958 1.85e-03
GO:0003707 2.27e-03
GO:0004960 3.69e-03
GO:0004957 7.37e-03
GO:0004955 8.29e-03
GO:0004954 8.29e-03
GO:0004953 9.20e-03
GO:0038023 2.56e-02
GO:0005496 3.10e-02
KEGG Pathway Download
KO P value
ko05224 3.37e-03
ko05200 2.54e-02
ko05218 4.64e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT13056 NONMMUT094509; Direct blastn
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG08486
TCCTCTTTCTGACACACACACATAGGCACATCTGCAAGAGGCTCATTTGGTGTGTGTTTTATAATCCCCA
TTTAAAGCTTGACCTACTTCAGGCAAGTGCTCATCACTTTTTTGGCTGATGTGCGGTATTTAATTTTTTT
TTCATAAGCTCTGTGAGGACTATGGGTGGGGATTTGTGCTGAATTTTAAACTCTAAATAGGATTGTCTCA
GGAAAATTCCCTGCCTTTTTGATAAAGGGGGTTATGTCATCGTCAGACTTGATCTGAAAAGAGCCGCCCG
TCTGATGTTTAGCAGATTTGCGATGCACAATTTCACAGGATGTTTGTAGATATTCGCTTTTCCCAGAATG
AAGGTTAAATGGCTTAGATTGTGATCTGTTATTCGAGTTATTGTGAAGTCAGGTGGAATGTAATCTGTGG
AGGTAATGCTGAGCACCAAAACAATGTTGATTAACCTCACTTGGGTCCAAATCTCATGCAAGGAATCTGA
TCAAACAAGTGGGGAAGGCTTACTACGAATAGCAACGTAAATATTACAAAATGAGTACATGTTTCACATT
TAGAAGGAAAACAAATGAAACGGTGGAGCACAAATGGATACTGAGGGTGTTGTAGTGTAGTGGATAAAAA
TCTGGACTTGTCTTCTCAAACCCCTAAAGGGACAAACTATTTTGTTGTCTTTAAATTGCAATTTCAGTCA
TAACATTACATTTAAACACCATTTACTTTCTAATTTAGAATATCTTTTATAATTTTTTTATATGCAAACA
ATTGATTTTTTTTTAAATTCCTTAACCAAGTTTACTGTTGTCCTGTTCATAGTATCACATAATGCTTTAA
CTTTTTTTGTTCCGATCTTTTTATTGACATTTTTACTCAAAACAGCAACAATTTCAAAAGACCAAGAAAA
GACAAATAATTTTTGCCCCCCACCATTTCTTTACAATATGTTAAGCACATTTTTATTCATATCATGACAT
GCTTACATGCATACGTGCATAAACAAATACAAGTAGATACAAATTCTCTGATGTTCTCATCTATTGTTTG
TACACGTATACACTCAGCGGCCACTTTATTAGGTATATCTGTCCAATTGTTCGTTAGCGCAAATTTAGGC
AAGTAGACATGGTCAAGACGATCTGCTGCAGTTCAAACCAAGCATCAGAATGGGGATGAAAGGTGATTTA
AGTGACTTTGAACATGGCATGGTTGTTGCCAGATGGGCTGGTCTGAGTATTTCAGAAACTGCTGATCTAC
TGGGATTTCCACTTAGAACTATATCTAGGTGTACGGAGAATGGTCTGAAAAAGAGAAAATATCCAGTGAG
CAGCAGTTCTGTGGGCCCAAATGTCTTGTTGATGCCAGAGGTCAGAGGAGAATGACCAGACTGGTTCCAG
TTGATAGAAAGGCATCAGTAACTCAAATAACCACCCGTTACAATCGATTTATGCTGAAGAGCATCTCTGA
ATGCACAACATGTGGAACCTTGAGGCGGATGGGCTACAGCAGCAGAAGACCACAATGGGTGCCACTCCTG
TCAGAACAGGAAACTGAGGCTACAATTTGCACAGGCTGAAAAACAACAGACAAACTGCAAATATTAATCT
TGGATCTCTTTGCTCTGCAATGCTGCTCCTTTTTTTAATGCTTAAATTACACAAGTATCACTCACTAAGC
AATATATTTTTAGTGAGTCTTCCGATCGCAGTAGAGGAGGAGTTGGACAGATGGTGCTCTGGCCGGTTGT
CACAACATTCTTCTTATTTTTTGCACAATTGCATCAAGGAGAAGAGAAACTATTAATATTGTGCTACACT
GTCAATGTTTATAAACACATTATCTGCTAAATCAATTGCTAACAGTACCAATATTCTGTAGTAGAAACTT
CTGTGGAAAAAAGAAAAAGTAAATAGTGTGTGCTTTTACTGAGAAGCGTAGATAATGTTTACAGTGATGC
ACACATCATTTGCTATGAACATATTTATTTGGAGTTAAAAGTATCTAAATATCAGATGCCCACATCGTTC
ATGCTAGCATGTGAATGAACAAAAGTATCTTCACTCTGTTTGCAGTGTATGCCATCCGTGAGGCTGCCAC
CTGCAACCTCATGAAGCTGGTGGAGAAGTTTGGAGCTGAATGGGCCCAGAATACCATTGTGCCCAAAGTC
CTTGGCATGGCCAATGATTCCAACTATCTGCACAGGATGACCACTCTTTTCTGCATCAATGTAAGTCTGG
TGCTTTAAATCAACTGCTCTGACAGGTAAACGTCATTTTGCATTACCTGGTGTAGCAAGATGTGAATCAC
TGAAAGTTGTGTTTTATTTGGGTCAGGCTCTGTCTGAAGCATGTGGACAGGAAATCACCACCAAGCACAT
GTTGCCTGTAGTCCTCAAGATGTCCACTGACCAGGTGGCCAACGTTCGCTTCAATGTGGCCAAAAGCTTA
CAGAAGATTGGACCAGTTCTGGAGAGCAGGTACTT