LncRNA Gene

ZFLNCG10829

Basic Information

Chromesome: chr20

Start: 2336025

End: 2342519

Transcript: ZFLNCT16790

Known as: LOC101884946

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR514028 retina control morpholino 7.52
ERR023144 brain normal 7.24
SRR514030 retina id2a morpholino 5.78
SRR594771 endothelium normal 5.13
ERR594416 retina transgenic flk1 4.50
SRR1205154 5dpf transgenic sqET20 4.18
SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 4.11
ERR594417 retina normal 3.66
SRR1565817 brain normal 3.61
SRR1565819 brain normal 3.59
Express in tissues
Correlated coding gene Download
gene correlation coefficent
LOC101884882 0.88
ldb2b 0.82
caskin1 0.82
zeb2b 0.80
picalmb 0.80
atn1 0.80
fnbp1 0.80
ca4a 0.80
LOC100334638 0.80
triob 0.79
Gene Ontology Download
GO P value
GO:0018298 1.36e-11
GO:0007602 1.36e-11
GO:0050804 1.55e-11
GO:0009583 2.25e-11
GO:0050953 3.13e-11
GO:0034762 3.17e-11
GO:0006813 3.17e-11
GO:0007156 3.59e-11
GO:0097485 3.73e-11
GO:0009582 3.74e-11
GO:0008328 8.68e-12
GO:0032281 3.43e-11
GO:0097060 3.78e-11
GO:0034702 3.83e-11
GO:0044456 3.90e-11
GO:0043235 3.96e-11
GO:0045211 4.81e-11
GO:1902495 5.36e-11
GO:0097458 5.97e-11
GO:0045202 7.33e-11
GO:0009881 1.36e-11
GO:0005231 1.87e-11
GO:0022835 2.03e-11
GO:0022824 2.03e-11
GO:0030594 2.76e-11
GO:0005249 2.84e-11
GO:0005230 3.43e-11
GO:0005234 3.61e-11
GO:0019905 3.74e-11
GO:0005244 3.90e-11
KEGG Pathway Download
KO P value
ko04080 1.63e-40
ko04724 2.54e-28
ko05033 1.33e-27
ko05032 7.91e-24
ko04728 1.01e-20
ko04727 2.15e-20
ko04713 7.49e-18
ko04721 4.38e-17
ko04723 1.53e-16
ko04024 7.62e-16
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT16790 NONMMUT005075; Direct blastn
OMIM
OMIM Phenotype
600852 Retinitis pigmentosa 17
Sequence Download
>ZFLNCG10829
GAGTGCATTTGCATGAGAAAGAAGTTTCCGGCTGCAGTTCACTGAACAGCCACAGGTGTCGCCGTTAACA
AGGCTTTAAAGTGAATTCAATAACATGAGCACTAATTTCACTTAACATTTTCCCAACTGTCCCAGAAGGC
CCGTCACGATAAGTCAATTTTGCTGTGTGATATATCATCATTAAAATGACTGCGATAAGCAATGTCGTCA
TTTTAAGATGAATTTATGTCTGTGTTTATATAATGATCACAAAACAGCATATAAATAAGCAAAGATGTCC
TTGTAAAATGGCTTTAACGTTATTCGTGAATCATGAATTATTCTGTTGGTGGGCTGCAGACTTGAGCTCA
TTTGGGCTGGTGTTTTTCCAATATGGTGCAGCACTGCTACTGACTATCGTGACAGGCCTAGCAGCATGCA
GCGGAAACACACAGAGACCCCTGATCTGAGAGCGAGGAGGGCAGGACGAAGAGGCATGCAGAGGGTCCGT
ATCCCGAGCAGAAGCACACATACCCCTGGAGCCTGCAGGCGCAGGGTGGTGGCAGGGCTGCCCGTCAGGC
GCTTGTCCCACTGACTGGGCCTGGGCTCGGGCGCAGCCTCCATAAAACTGCGCTTTAGCTCGCTAATGCT
AGCCTGATGTTTCAACACATCCTCCTGGGTCTTATCCAAGTCCTGAAGGGCCCGCAGCAGCACAGGGGAC
AGGCAGGCAGGCGGGGGGAGGACAGAGGGACAACCAACAACCAGCACATTAGTCATGGAGAGACCTGAAC
CACGGTAAAGAGTCCAGCCTCACTGCACACCTGACTGACTGACCGCAGCCTCCAGAATAATCTTCAAATA
ATATTTAGCAAATATTCTCGTTTAGTTTGGTGAACATGACAATCTTAAGATCTTTTATTGCGCTGTAATA
ATGTTGGACGCCACTATTAATTTGACGTAAATGAAAATAAGTGTGTGAGGGACAGAGATACAGACTTCAG
CTTTTAGTGAAACTAGGCGTGTGATGATAACCGTTTTCAAGGCCCATGCCTAATTAAAACAGAAAAACTC
ATTTTAATGTTTAATGTGACACAAAATTCGACTGAAACAGAGTTATTCAGAGTTTGCTTTGGTGGTTTGA
GACGGTTCATCAGCACAGACTTTGGTAAACTGTTTGGAATTACTCAAACAAACCTCTGGATATGCCAGAC
TTCATTCAAAACGACCTCACCACCATTCAATTCGAGCTATTTGTAACCAAAGAAGTGTGCTCTGAAGTAC
AGTGTTTCTCAACCACGTGGCTGGAAGAGCACCAGCACTGCATGTGTCTTGGATGTCTCCTTTGTCTGTC
ACACCTATTTCAGGTCTTTCAGTCTCTGATTATGAGCTGATGATCTGAATCTGGTGTGTTTGGTTAAGGA
GACAGAAATGTGCAGAGCTGGTCGTCCTTTGAGAAACGCTGCTGTGGTGCATCACACCAATTTGTTCTTT
GGGCGAAATTGTTGAAAACTAAAGGGAAAAAAAAATCAAGATTTATGTTTATTACACTGTAAAACCCAAC
AGTCGACTTTGCATAATGAAATGAGTGTAGTTAACTCAAAATGTACTAAAAGTTAATTCAACTCATTTGT
AAAGAGTTTTGAACTCAGTGTTGAAGGTCATGAGTACTTCATCTTAAATGGAGTAAGTTCACAGTACTCA
CATAGATTCGTTTTTTAACTTGCAGAAATCAGTTTCCTCAAACGGTTTGAGTTGCCTTAACTTATTTGGC
TTTACAGTGCTCAGTTGGTTTGAGTTCTCTTCATTTATTGGAGTTAACTGTGCTCAAATAGCTTCGATTA
CTCAAACGGATTAAGTTCACAGTACTCATTAGGATTAGCTTTAGAACTTAAATGGTTTGTTGCAATCGGT
TTCCTCAAACGGTTTAAGTTACCTCCACTTATTGGGTTTTACAGTGTAGTTAATTCTTCAACCTGAAGGG
GTGTAACATCATTTTGAAAAGCTCTCTGGCTTAAAAGGAGCTTATTTGTAGTTTGTTTCATTAGTTATTG
TTTGCACAGAATCTGAATGTCTGCAAAAACAACATAGCGATGCTCAGGCGCTTATTTAACCTCTGAGCAA
AGACCACTAAAAGTCATGCTGTACATAAAGCAATACCTTATGCAGGTGTTTATAATTCATCTGACACACC
TAAGAGCAGCTCAATTTTCTGTACATCTATCCCTCACTCAAATAAGCGGTCCAGTCAACAGGAAACATCC
TCAAACTTTCTTTGAGTGGTTTGAAGGAGGCTGGTAATCCCAAAGGTGTTTGATCCTGGTGTAATGATGG
GATTACGAGGGTCAGGTCAGAGGTCAGCAGTGAGGCAGGACTTGTGTACACACTGAGGACTGGAGCGGTG
CAGTAAAACACTGTGCCTGTGCCAAAGACGCCCACTAAATGCCAGTCTGAGCGTGCGACCAGTGTGTCAA
AATGTGGAAACACCCACTAGTGTTTTTAGAGCAGTGGTGCACAATCCTGGTCCTGGAGATCTACCTTCCT
GCAGAGTTCAGCTGCAACCTTAATCAAACACACCTGTATTTATAACCAAGTGTTCCTTCAGATCCTGCTT
AAATGGTTTAGTTGTTTATTAGAGGTTGTTCAGAGTCGCTGCTAAACTCTGCAGGAAGGTAGATCTGTAG
GAACAGGATCGGACACCCTTGTTTTAGAGTCATCAGTATGCTGACACTGTGATGCCGTTGTTTTACTTTT
ATTGAACATCAATCTATTTGCATGAGCATCAGTAGCTCGATTTGGATTATTTGATCGAAACACAAAATGA
TTAGACAATGTTAGAGCAAAATCAATTCAAATGACAAAATACTCTTTTATTTAGTCTACCTGACTAAAGT
CTTTTCGCCCATCCATGTTTTGGGAACAGCAAATAATAACTAGTTGATCATTTGGTATCAGAAGTGGCTT
ATATGAAAGGCAAAGGCCTCTAGATGACATATATTTGAGCACAATAAAACATGATCATGCCTTGATTATT
AATGATTTCATTAGGACAGTAAGGTCTGACTCTGCTTGGACTAAAGTCTCATCACTGAACAGAAATAATG
TCCAGTATAGAATATAAAGTCCTGCTGCAGTGGAGACAGAATGAATATTGTGTCTGACTCCATCATGAGC
TTGGAGGACTGCATCCATACATCTCTGCACTGACTCAAATCACTGATTAATAAAGTCATCTGGAATGAAG
AAGAAAGCGTTCAGCAGGACTCCCAGAGCTCATCAAGACTCTTTCTGTTCATCTTCAACACCTCTTCCTT
CATCTTACCCCAGACATGCTCAATAATGTTCATCTCTGGTGACTGGGCTGGCCAATCCTGGAGCAGCTTC
ACCTTCTCTGCTTTCAGGAGCTTTGATGTGGATGCTGAAGTATGAGAAGGAGCGCTATCCTGCTGGAGAA
TTGTCCCTCTCCTGTGGTTTGTAATGTAATGAGCAGCACAAATGTCTTGATCCTTCAGGCTGTTGATGTT
GATCATCCACTCTGCAGATCTCTCGCACGCCCCCATACTGAATGCAACCCCAAACCATGATTTTACCTTC
ACCAAACTTGACTGATTTCTGTGAGAATCTTGGCTCCATGTGGATTCCAGTATGTCTTCTGCAGTATTTG
TGTTGATTGGGATGCAGATCAGCAGATGATTGATGCGAAAATCGACCTTCTGCTTCCAAATGATCAACTA
GAATTTAAGATATTATGTGTTGCTTTTACAACTGGGATCCGCAACAAGACTTTTGTCAGGTAGTGTAATA
CTAGCAATATCAGGTTTATAAAAAACTCCTCAAAATCAATCAATCAATCAATCAATCAATCTATCTATCA
ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT
CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT
ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCTAAACA
AATAAATAAGATTGTTGTTTTGTTTTTCAGTAATAATACGTCAAAATCAGGTTTGACTTGCTACTTCTGT
GGAACAAAATAGCCAAAGTAAAATAATCATATTTCAAACCAAATGATTTTTATTTTCTAATTTTAATGAC
TTGTTTCTTTAAACAACATTTTCTTCCTTGACCAATCGCTAGATAATTGGATTATAAACAGGACAAAAAA
TAAGTAAAGCACTTTGTGGAGTGTTCTGGAGTGGTCTGCTTGTCTCAGAGGTTATGAGTGTGTGTCTTCA
GCACCGACAGGTTCACCCCCAGGATGAGTAACTTCTTTAAGTTATACAATAAAATGTAAACAATCACCGC
AACCAAAGCAGAAAGTCACCTGTCTGGTTAGGGAAATGCTATTAGTGTTGTTATCAGAGCAATTCCCAAA
TCTTACAAACACAAACGTTAAAAATCACGTACATTCAGATCACCCAGTTAACATGCAACCCATGCATGGG
TGTACACACACACTACACACACACACTAAAGCATGCACACAAAGCCTGAAAGAGGAAGAGTGAGAGGCAG
CCCAGGACAGTAGCCAGAGAGGGGACAAATGTCCTCCATCAATTAAGCTTTTGCTCTTTCTTTCATTGAA
CTTCATTGTGTTTCTCAATAGTTTTGATTGCATACAGAACAACATACAAACCTCCAACATTAAATTGCTA
TGTCTGACATATATATTTTCCCCTTGCACTCTCAACTTGCTCTGTGGATCAAAAAAAATGAGAACACATT
TGAACAAAACGAGAAGAAAAACAAAAAAAGACAGATGATAATGAAGTGGAGTCTCAAATCTGATGAGGAG
AAAATGATTACAGAGGACTCTGAAAGCCTGAGAGCACTAGTGAAAACACCGCTAATGTGTCTTTGCATCA
CTTAACATGGTTTGCTTTTCAAATGATGGAGTCAGAATGCCACTTTGAGTGAAACGCCCAATTGAAAACA
CTTCCGATGTCCTCTCAGGCTTTCTGATGCAACCTCATCCAATTTGGTGCATATATGACATTTCCTGATC
AGCATCACGGTTCTCTGAAGTAACCAACCAACAGGCAAATCAGCATTTGATCACAAGTCAACAATCAGCA
CGTTAATCTCCTGTTGATTACTCAAGAGAGCTCATGTGATTAACGCCGCATTTGCAACTTAAATAATAAA
ACACGCACATGAGAACAAGCACAGAAATAAAAACACTTAACCAACACCACAGCAGACGAAGCAAAGAGTT
CACGTCATCAAACCACCATGATGCAAAAAAACAAAACTCAATCTCAAAAAGACCTTTGTTTGAGGAGCAC
CAGCGCCACCTTTATCCGTCTGCACATGCCGTCAGAGATAAAAGATTGAGATTACATCAAAACACATCCT
GCTAAACCTCAGAATTAAACATGATTACAGATGCAAGCTTGGAAGGTTTGCAGACCTTAGAGGCTGACTC
GGAGGTGACGGATGTGGCCACGTCCACACTTGGCTTCTCCTCGAGCTCCACCTGTGGAGCCTAATTGGTG
GAATAATGGACACATTTTTGGAAAAGGTGAAATGGATGATAGGAAGGCCTCTATCCCTAATCAATGAGCA
CACAGGGTGTGTGATGTTATGAGGGGCGAGCCCTGAGCTCTGGGACAGGCTAGTCTGAGTGCGATGCTGA
TGTTGCTGATCTGTTCTTCTGGCTCTTTAGTAAAATTTACGAAACTCTTGATTAAGAAGATCCAAAATAT
GTATAAATCTGCTGCGTTTTTGTAAGATTGAAGCTGCTCTAGTGATCTGGTCTAATAATAAATGCTTCAG
CAGAAGGGATTTGAGACCGGATGCAGACTATGAATAGGGTCCCACTGGACTGCTGCTGATTTAAACGGCT
ATAAGCTGAAAGCGGTGAACATATTTCGCATTTCACACTGAAAATCTGATACTGGAAGGTGGAGCGGGGA
CAGAAGAAAAGTACTAGAGATGCACCGATTGCAATTTTCTTAGTTAATACCGATTCTTTTGGTATGCTTG
ACCTGCCGATACCGATTTATGCCGATTCAGATGTTCTAATCATTCTAATATAAAATATAATTTTCTGAAG
AACTATAATTGACAGCATATACAAGCAAAAAAATATATATATATTCCATATTAAGAGGACATCATTGTTC
AAATAAACTGCAACAACACTAAAAACAAGTCCTTTTCCACTGTTTATAACATTAACTTTCGTCTGTTTTT
ATATTTCACTATAGTCCAAAGCTTATGAAATGTTTTGATTAATAGTTCTATGTATGGACCAAGGGGGGAT
AAGTCAGAGCACTCACTCTAGTCCCCTGGGCTCTGCGCTGGTTGGGGAAATTCCAAATTGAACCAAAGCA
ATCCATTACAACTGGCTTAAGATTGTCAAGCAAAATTCGGGACATATATACATA