ZFLNCG12170
Basic Information
Chromesome: chr22
Start: 24405976
End: 24406982
Transcript: ZFLNCT18789
Known as: ENSDARG00000094476
Genome Browser
Express profile
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Express in top 10 samples
Sample | Tissue | Condition | FPKM |
---|---|---|---|
SRR594771 | endothelium | normal | 17.23 |
SRR527844 | 24hpf | normal | 9.18 |
SRR1569495 | embryo | normal | 7.83 |
SRR749515 | 24 hpf | eif3ha morphant | 7.73 |
SRR749514 | 24 hpf | normal | 7.71 |
SRR527840 | 24hpf | normal | 5.90 |
SRR1004786 | larvae | control morpholino | 5.34 |
SRR527836 | 24hpf | normal | 5.11 |
SRR797911 | embryo | prdm1-/- | 5.03 |
SRR797908 | embryo | normal | 4.91 |
Express in tissues
Correlated coding gene
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gene | correlation coefficent |
---|---|
draxin | 0.84 |
cldn5a | 0.81 |
rhbdl3 | 0.81 |
rfx4 | 0.81 |
LOC100537878 | 0.80 |
lrrn1 | 0.80 |
wnt8b | 0.79 |
epha4a | 0.78 |
LOC101883716 | 0.78 |
wu:fc13c02 | 0.78 |
Gene Ontology
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GO | P value |
---|---|
GO:0030902 | 1.01e-11 |
GO:0050769 | 1.68e-11 |
GO:0051962 | 1.71e-11 |
GO:0045666 | 2.25e-11 |
GO:0097485 | 2.64e-11 |
GO:0009952 | 2.70e-11 |
GO:0010720 | 2.70e-11 |
GO:0021953 | 2.70e-11 |
GO:0001708 | 2.97e-11 |
GO:0050767 | 3.79e-11 |
GO:0005634 | 3.09e-10 |
GO:0043231 | 3.43e-10 |
GO:0043227 | 3.73e-10 |
GO:0043226 | 3.76e-10 |
GO:0043229 | 3.95e-10 |
GO:0042995 | 1.06e-08 |
GO:0044441 | 1.37e-08 |
GO:0044463 | 1.41e-08 |
GO:0005929 | 4.72e-07 |
GO:0005578 | 6.17e-07 |
GO:0001071 | 1.38e-10 |
GO:0003700 | 1.38e-10 |
GO:0043565 | 1.99e-10 |
GO:0003677 | 2.85e-10 |
GO:0003676 | 3.19e-10 |
GO:0005488 | 4.08e-10 |
GO:1901363 | 4.13e-10 |
GO:0003824 | 4.36e-10 |
GO:0097159 | 4.58e-10 |
GO:0000981 | 1.82e-07 |
KEGG Pathway
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Conservation
Zebrafish lncRNA Transcript | Human lncRNA Transcript | Mouse lncRNA Transcript | Methods |
---|---|---|---|
ZFLNCT18789 | NONHSAT008620; | Direct blastn |
OMIM
OMIM of this lncRNA gene hava does not exist!
Sequence Download
>ZFLNCG12170
CGGGGCACTTACAGCCCCAGTCGGCAGGAGAAGGAAGGCTCAAGGGTGGAAATGTGGAACATTGTACAAC
CTCCACCAATGGAGAGACTCATCTGATGCTTTTTACAAGACGGCGGAGAAAAGAAAGTGCTTAATTATGT
GGCAGCTATAAGAGTTGGACCATTTTTGATAGGACAATCTTCCACATAATGGATGTTTAATTTATAATAG
TGTGTAATGATCGCCTGCCATTGGTGTAAAATACCTCTGAAAAGCTTTAGGATTCATTGATTGGTGAATT
GTGAAGTGTTTTTTTAATAATAGACAGGTGCTTCAATGCAATGCTGCTCAACAATCACGGTTAAATAGAA
CAAATTTAAGAGTTCATGAGCAATGTGATTTCAGGGTGGATAATATTTTTCATCTGGATGCATCAAGGTG
TATTTTTTATGTGTTCCTGCTGCCGGTAAGCTGTAAAATTGACATATGGAGGGGAAAAAACACTACACTT
CTTTGTAGAGCACAGGTGTCAAACTCAGTTCCAAAAGGGCCGCAGCTCTGCACAGTTTAGTTCCAACCCT
GATTAAACACACCTGATCAAACTAATTAAATCCTTCAGGATTGTTTGAAACCTACAGGTAAGTGTGTTGG
AGCAGGGTTGGAACTAAACTGTGCAGGGCTTCGGCCCTCCAGGAATTGAGTTTGAAACCCCTGATTTAGA
GCATAGGTCTCAAACCCGATTCCTGGAGGGCCACAGCTCTGCAGTTTTGCTCCAACTCTAATCAAACACA
GCTGATCCAAATAATCAAGGCGTTCAAGACTACTAGAGACTATTAAGCTTAAGATGTGGTTAAGATGTGA
GGTGGTTGGAGCTAAACTATGCAGGGCTGCAGCCCTCCAGGAATTGGATTTGAGATGATTGATGTAGAGT
TTTTTAGGCATGTGCAATGCTTAAAGGGATAGTCCACCCAATAAATGTATTACCGTGTGCTCCACTTGTT
CCAAACCTGTTTCAGTTTCTTTGTAC
CGGGGCACTTACAGCCCCAGTCGGCAGGAGAAGGAAGGCTCAAGGGTGGAAATGTGGAACATTGTACAAC
CTCCACCAATGGAGAGACTCATCTGATGCTTTTTACAAGACGGCGGAGAAAAGAAAGTGCTTAATTATGT
GGCAGCTATAAGAGTTGGACCATTTTTGATAGGACAATCTTCCACATAATGGATGTTTAATTTATAATAG
TGTGTAATGATCGCCTGCCATTGGTGTAAAATACCTCTGAAAAGCTTTAGGATTCATTGATTGGTGAATT
GTGAAGTGTTTTTTTAATAATAGACAGGTGCTTCAATGCAATGCTGCTCAACAATCACGGTTAAATAGAA
CAAATTTAAGAGTTCATGAGCAATGTGATTTCAGGGTGGATAATATTTTTCATCTGGATGCATCAAGGTG
TATTTTTTATGTGTTCCTGCTGCCGGTAAGCTGTAAAATTGACATATGGAGGGGAAAAAACACTACACTT
CTTTGTAGAGCACAGGTGTCAAACTCAGTTCCAAAAGGGCCGCAGCTCTGCACAGTTTAGTTCCAACCCT
GATTAAACACACCTGATCAAACTAATTAAATCCTTCAGGATTGTTTGAAACCTACAGGTAAGTGTGTTGG
AGCAGGGTTGGAACTAAACTGTGCAGGGCTTCGGCCCTCCAGGAATTGAGTTTGAAACCCCTGATTTAGA
GCATAGGTCTCAAACCCGATTCCTGGAGGGCCACAGCTCTGCAGTTTTGCTCCAACTCTAATCAAACACA
GCTGATCCAAATAATCAAGGCGTTCAAGACTACTAGAGACTATTAAGCTTAAGATGTGGTTAAGATGTGA
GGTGGTTGGAGCTAAACTATGCAGGGCTGCAGCCCTCCAGGAATTGGATTTGAGATGATTGATGTAGAGT
TTTTTAGGCATGTGCAATGCTTAAAGGGATAGTCCACCCAATAAATGTATTACCGTGTGCTCCACTTGTT
CCAAACCTGTTTCAGTTTCTTTGTAC