LncRNA Gene

ZFLNCG12624

Basic Information

Chromesome: chr23

Start: 28011118

End: 28013009

Transcript: ZFLNCT19488

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR886455 128 cell 4-thio-UTP metabolic labeling 43.82
SRR886456 256 cell 4-thio-UTP metabolic labeling 42.19
SRR886457 512 cell 4-thio-UTP metabolic labeling 40.67
SRR749514 24 hpf normal 29.18
SRR1035978 13 hpf rx3-/- 28.88
SRR1035981 13 hpf rx3+/+ or rx3+/- 26.77
SRR726540 5 dpf normal 21.34
SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 20.21
SRR1205154 5dpf transgenic sqET20 20.12
SRR941753 posterior pectoral fin normal 19.80
Express in tissues
Correlated coding gene Download
gene correlation coefficent
lamtor1 0.71
ptger1c 0.60
zgc:173693 0.58
zgc:171551 0.57
tyro3 0.56
tmod2 0.56
mfsd11 0.55
zgc:174651 0.55
nr5a1b 0.55
tmx4 0.54
Gene Ontology Download
GO P value
GO:0045944 9.69e-04
GO:0032439 1.49e-03
GO:0043987 1.49e-03
GO:0016310 2.12e-03
GO:0043988 2.98e-03
GO:0010604 3.49e-03
GO:0045893 3.87e-03
GO:1902680 3.87e-03
GO:1903508 3.87e-03
GO:0031325 3.91e-03
GO:0090575 1.23e-03
GO:0044798 1.68e-03
GO:0071986 7.44e-03
GO:0036379 1.04e-02
GO:0005865 1.04e-02
GO:0005667 1.24e-02
GO:0031902 1.78e-02
GO:0045121 2.65e-02
GO:0098857 2.65e-02
GO:0000123 4.53e-02
GO:0035175 1.49e-03
GO:0017160 1.49e-03
GO:0004879 2.49e-03
GO:0098531 2.49e-03
GO:0016301 2.50e-03
GO:0004958 2.98e-03
GO:0038023 3.46e-03
GO:0004714 3.80e-03
GO:0016772 4.73e-03
GO:0004672 5.35e-03
KEGG Pathway Download
KO P value
ko05200 6.85e-05
ko05214 3.18e-03
ko05212 3.51e-03
ko05218 3.68e-03
ko04520 5.36e-03
ko05215 6.20e-03
ko04066 7.57e-03
ko04110 1.04e-02
ko04068 1.36e-02
ko05161 1.46e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT19488 NONHSAT214136; Direct blastn
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG12624
ATGTTGATGCAAAGCAAAAAGAAGATGAAACTACCAGTGAAACGGTGGTTGCAGAGGCTGTTGAGCAAAA
ACCAGAGGACACTCAGGACCCTCCTATAAAGGATAGCCCAGACAGCCCTGTCTCTGACACTAAAGAAGAG
GCTCAATCTGATGTAGCTGGGACTAATATAAAAAGGCAGGATGAATCGCAAGACAAGCCTCCTCAATCAG
AGACAGAGTTGGATGGTACTGTTAAGTCCACAAAAGCAAAACCTCCATCAAGCCCATGTTCCCAGTTATC
TCAAATCACACTCCCTGTTGCAGAAGAAGAGGAGCCAGTTGCTATGGACTTGGAGGAGATGGGTTCCCAA
GAAGAGACGATAAACAGGACTCCTCCATCCCCTGCTCCTCACACAGAAATGCCCACTGCATCTGACACAG
ATGATAGAATGGGACAGTCTGAGGATGAAGAAGAGGAGGATGAGCAGGGTGTGGAGGAATCTTTAGATGA
TTCACTCCTCAAAGATGAGAGTCAGTGTGAAGAGGATCAGGCCAGGAAAGAGTTGCAGGAGGATATGAAG
CCAGAGCTGGTCCTTGATGAGACCTCAAACCTTAGCCACGGTGATGAGAGCAGTAGTGGTTTTCTTGGCT
CGCCGGCAGAGGCAGACTCTCAGATGCTGTCCATGGAGCTTAGCCTGGTGCCAGCCGGCAGGACCCGATC
AGATTCGCTGCTCACCGAAACTGAGGACTCCTTGCCTTTTGATCCACTGAAGCCCGATGGTGAGAAAGTG
AAGCGCAGGGGTTCTCCAGGACGCTCGCGAATGAAACAGGTGAATTTCTAAATGAATTTTGTAAGTTGTT
CTGAATGAATTTTGATGGGTTCTTAATTACTCCAGCAAAGTATGTTTGATGCACATAAATGACTTCTGAC
GTTTCAGGGCCGAGGCAGTGGGTTCCCAGGGAAACGGCGGCCACGTGGTGGTGGTAGTGGTGGTGGTGGT
GGAAGAGGGCGTGGACGGTCACGTCTCAAAGCGATGGCCTCTTGCATTGATGCCTTTCTTGTGAGTTTTT
CAATTTATGGAGTATTTCCACTTGAAAGCTCTTGCTTTACTAGCATTTTTAAATGTATTTCACGTAGAAT
TGCTTTTAAAAATTTTAGTTTTAAAGATGTTTTTTAATTTGCAAATTATTTTAAATATAATAATTATTAT
TGTAAAATTATTTTGGGGTTAACAAACTAATTTAAATAAATGCATTAGCATTTATTTAAATAAACCAAAT
ATAAATATTAGCACATTAATTCACATGAATTATTTGCCATGATCACTTACATTTTTAAGTTATGGTATCC
GTGTTGTTTAACTTAAAACTACATAAAATGCAAAATATAAAATAAGACGTATTCATCAAACATTAACATT
CATGGTGAGACACTGTCTTGTTAAAAAAAACAGCTGTGACATCTTTCAGTTACAGCAATACCAACACTGC
ATCCTACTTTCATTTAACAGCTGTTATCTCTTATAAAAAGAAACCAAGGTTTGCATGTTTAAATAGAAAA
CATCTGAAATATTTACAGCTAAGCATGACTGCAGACACTGGAATTAGCAAAGAGGAAGATGAGGAGGAAG
ATGACACCATGCAAAATACTGTGGTACTTTTCTCCAACACTGATAAGTTTGTCCTGCAGCAGGTATGAAT
CTCATTGCTCTTTACCTTTGCTTTCATATAAAGTACAAGATCACAATAATCTGATTCATCTTGTGTGTGT
TTGTGTGTGTGTGTGTGTGTGTGTGCGTGCAACAGGACATGTGTGTAGTTTGTGGTAGTTTTGGACAGGG
TGTGGAGGGCCAGCTCCTAGCATGTGCTCAGTGTGCACAGTGTTATCATCCATACTGTGTGAACAGCAAG
G