LncRNA Gene

ZFLNCG12733

Basic Information

Chromesome: chr23

Start: 36143890

End: 36146912

Transcript: ZFLNCT19644

Known as: ENSDARG00000097150

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR797914 embryo pbx2/4-MO 10.68
SRR797917 embryo pbx2/4-MO and prdm1-/- 10.41
SRR658541 6 somite normal 8.99
SRR797911 embryo prdm1-/- 8.49
SRR797908 embryo normal 8.16
SRR658545 6 somite Gata6 morphant 7.43
SRR658547 6 somite Gata5/6 morphant 7.26
SRR658533 bud normal 6.62
SRR658543 6 somite Gata5 morphan 5.80
SRR658535 bud Gata5 morphant 4.84
Express in tissues
Correlated coding gene Download
gene correlation coefficent
hoxc3a 0.86
hoxc9a 0.86
hoxb10a 0.85
hoxa9a 0.84
hoxc10a 0.82
hoxa11a 0.81
hoxd10a 0.79
hoxd9a 0.78
hoxa9b 0.77
hoxb9a 0.77
Gene Ontology Download
GO P value
GO:0007275 1.30e-10
GO:0032502 2.27e-10
GO:0048856 2.65e-10
GO:0044767 2.68e-10
GO:0048598 1.02e-09
GO:0044707 1.55e-09
GO:0009888 1.61e-08
GO:0048562 4.56e-08
GO:0007517 1.34e-07
GO:0032501 3.11e-07
GO:0032991 6.47e-06
GO:0005911 2.29e-05
GO:0044446 4.05e-05
GO:0005923 4.22e-05
GO:0070160 4.99e-05
GO:0044422 7.91e-05
GO:0044428 1.23e-04
GO:1902494 2.62e-04
GO:0043234 3.14e-04
GO:0030057 7.80e-04
GO:0043565 7.98e-11
GO:0004859 2.60e-06
GO:0055102 2.60e-06
GO:0003677 5.26e-06
GO:0005509 6.00e-05
GO:0022892 9.30e-05
GO:0005488 1.60e-04
GO:0022891 2.20e-04
GO:0004198 2.77e-04
GO:0004197 3.65e-04
KEGG Pathway Download
KO P value
ko05217 1.32e-04
ko04390 1.03e-03
ko00590 3.62e-03
ko05418 4.19e-03
ko05200 4.91e-03
ko05205 7.92e-03
ko00512 9.09e-03
ko04392 1.15e-02
ko04670 1.18e-02
ko03050 1.92e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT19644 ENST00000513533; ENST00000439545; ENST00000481995; ENST00000548801; ENST00000518046; ENST00000518088; ENST00000613383; ENST00000523364; ENST00000429755; ENST00000467897; ENST00000508688; ENST00000613939; ENST00000512427; ENST00000620092; ENST00000521197; ENST00000615604; ENST00000521231; ENST00000464382; ENST00000602610; ENST00000523790; ENST00000518848; ENST00000479766; ENST00000465846; ENST00000611352; ENST00000466037; ENST00000517635; ENST00000455246; ENST00000524304; ENST00000513165; ENST00000492897; ENST00000520395; ENST00000460041; ENST00000426965; ENST00000523331; ENST00000480872; ENST00000509870; ENST00000505700; ENST00000521159; ENST00000520360; ENST00000440016; ENST00000519935; ENST00000477144; ENST00000518947; ENST00000435312; ENST00000512206; ENST00000425595; ENST00000521687; ENST00000524048; ENST00000474040; ENST00000517641; ENST00000502764; ENST00000491264; ENST00000474324; ENST00000562848; ENST00000498652; ENST00000604081; ENST00000467155; ENST00000514702; ENST00000519694; ENST00000517550; ENST00000476204; ENST00000453875; ENST00000593438; ENST00000522863; ENST00000494420; ENST00000522193; ENST00000487849; ENST00000504972; ENST00000620211; ENST00000522674; ENST00000620901; ENST00000567780; ENST00000424518; rna84770; rna84761; rna110524; rna110493; rna84762; rna51654; rna110529; rna110526; rna110528; rna110538; rna84765; rna110530; rna51647; rna51645; rna51652; rna110525; rna84763; rna51650; rna20444; rna84771; rna110537; NONHSAT054421; NONHSAT028514; NONHSAT075627; NONHSAT211837; NONHSAT028528; NONHSAT119677; NONHSAT119697; NONHSAT183137; NONHSAT119670; NONHSAT175307; NONHSAT119672; NONHSAT119682; NONHSAT054434; NONHSAT119698; NONHSAT028529; NONHSAT163579; NONHSAT175305; NONHSAT119702; NONHSAT119704; NONHSAT054411; NONHSAT028518; NONHSAT119680; NONHSAT119706; NONHSAT054437; NONHSAT054405; NONHSAT028510; NONHSAT211840; NONHSAT119687; NONHSAT211839; NONHSAT211844; NONHSAT054435; NONHSAT054444; NONHSAT028530; NONHSAT054450; NONHSAT054401; NONHSAT119711; NONHSAT119684; NONHSAT211838; NONHSAT028511; NONHSAT185938; NONHSAT119675; NONHSAT054441; NONHSAT185937; NONHSAT119678; NONHSAT054449; NONHSAT175306; NONHSAT119669; NONHSAT163580; NONHSAT119673; NONHSAT054406; NONHSAT054433; NONHSAT054403; NONHSAT213318; NONHSAT175303; NONHSAT119693; NONHSAT028509; NONHSAT119683; NONHSAT119703; NONHSAT054442; NONHSAT075630; NONHSAT054443; NONHSAT119705; NONHSAT054446; NONHSAT028539; NONHSAT028527; NONHSAT119688; NONHSAT119700; NONHSAT119710; NONHSAT175308; NONHSAT028507; NONHSAT211842; NONHSAT119708; NONHSAT211843; NONHSAT028531; NONHSAT163581; NONHSAT054427; NONHSAT054408; NONHSAT054431; NONHSAT163582; NONHSAT028517; NONHSAT119709; NONHSAT028512; NONHSAT175304; NONHSAT119674; NONHSAT028541; NONHSAT119696; NONHSAT054407; NONHSAT213319; NONHSAT054454; NONHSAT119685; NONHSAT119690; NONHSAT119676; NONHSAT028519; NONHSAT054432; NONHSAT211841; NONHSAT028513; NONHSAT028516; NONHSAT119707; ENSMUST00000183562; ENSMUST00000150698; ENSMUST00000185194; ENSMUST00000136302; ENSMUST00000134512; ENSMUST00000185090; ENSMUST00000126966; ENSMUST00000184301; ENSMUST00000137729; ENSMUST00000131502; ENSMUST00000190845; ENSMUST00000145799; ENSMUST00000132326; ENSMUST00000152027; ENSMUST00000184104; ENSMUST00000200824; ENSMUST00000100000; ENSMUST00000156515; ENSMUST00000140952; ENSMUST00000156342; ENSMUST00000147174; ENSMUST00000139005; ENSMUST00000141850; ENSMUST00000184302; ENSMUST00000154027; rna35395; rna35407; rna35414; rna10234; rna35403; rna10228; NONMMUT085706; NONMMUT037975; NONMMUT056965; NONMMUT037980; NONMMUT056968; NONMMUT037983; NONMMUT056957; NONMMUT056950; NONMMUT056969; NONMMUT085709; NONMMUT037973; NONMMUT037974; NONMMUT122276; NONMMUT037979; NONMMUT037976; NONMMUT056966; NONMMUT056970; NONMMUT011703; NONMMUT056953; NONMMUT056971; NONMMUT037977; NONMMUT056955; NONMMUT085710; NONMMUT085707; NONMMUT011705; NONMMUT107327; NONMMUT037978; NONMMUT056952; NONMMUT011706; NONMMUT056954; NONMMUT056959; NONMMUT109225; NONMMUT085708; NONMMUT109226; NONMMUT037982; NONMMUT011701; NONMMUT056960; NONMMUT056967; NONMMUT056961; Collinearity with conserved coding gene
OMIM
OMIM Phenotype
192950 Vertical talus, congenital
605432 Radioulnar synostosis with amegakaryocytic thrombocytopenia 1
Sequence Download
>ZFLNCG12733
GGTTTTATTATTTTATTTTCATTTTTAAAACAGCGTAAAAACATCTTTTTTGCGTCTGTACAACAGCTTT
ATACAATCATTTAACACCAAACCAATTGTGAGAGGTGATTATAAGAGAAAATAATATTTAAAAAATCGTA
AAGGTGAATAATAAGGGTGATAGAAGCGACTTTAACATGAAGTACCACGCCCTCGAAAAAACAGATAAAA
GCAGGACAATGTTTTATACAAACTTGTATGCACATAACACACACACAGACATGATGCCGTTGTTGAACGT
TTTCTATTAAATGTTTGTTCTGTACGTGTCACGCTGTAATTAATTTATTAGTTTGATAAGATGCATTGAT
AACCACAATACGCCACATCCCACCAAGACTTCATATGATTAATTCTCTTCACAAAACTGAAAGCGAAATC
TACTGTCAGGGTTTTTATATTATATTGCCTCCGCAGTGTATCGCAAGAAAAAAAAATAAGATCAACGCCA
TAATCAACAAGCTGACACACCTACTTATAAACCACAAATTGAGTTAATGAAATGCTACTGCTTAAATATA
GTATGCTTGCGTGTACTTAATTTTATTTAAATTATGTTAAATTAAGAACTTTAATAAGTTCTTTTACTGC
TGAAAGGTGCACAATTACACCCATTACTTTGCCAAAATTCTCTAAACTATTTAACTAATTAAACAGTAAG
GTTTTGTAAAAACTGTTTGTATTACAAAAGTAATGTTAACTTTTCTTTTTTTTTTTTTTTTTGCTCGAGT
GTTTTTGACGTGTCTATGTATTAATTTGTCTGATGTTCCCACAAAAGAAGGGTGGAAAAAAAAGCCTGAC
CTCATGTGGCCGGTTTCATACTGGGCCTAACACTGACAATGACAGCAGCCCAAAAATTCACAGATTTCCA
AGTGCCGCAATATACGTTCAGTAAAAATCTTAAATTTGCTATATAATAATGTGCATGTTAACCGTAAAAT
GTTCAAGACGGATTCATTTTCTGCATGACAAGAGTACACCGTTAAATTATTTGAGATATATGTTTAGGAT
CCAATTATTTTGTTTATTTGTGAGCCAGTTTTAATAACTTGAAATTGCAAACAAAATAAAAACCTATATT
TACAAATATTTTACAAAGCTTCAAGTACAATAATTTCACAAAGCTTTAGGTATAAAATAAAGGGATATAT
ATATATAATTTTTTTTCCATTTAAAATACTATTTGCCCTGTAGTACATCAACGTAGTTGACAAAATCGCA
ACAATTGTAAATGACAATGTAAAGTTAATAATGAAAGAGAACATTAAACACTTTACTAACTTATGTAACT
AGTTTTATGCAGATGTTTTATCAAAATATGTCGCAGTACAATCGATAAACGTAGAAAGTCTTTGCAAAAA
AATTGCAAAAGCCATAAACAAATGTATTATTAATAATGAAAGAGGTCAATAAATACTTTACTAATGTATG
TTGACTGTGTTATGCAGATGATTTGGCCAAAATATTGCAGTAAAATTGATAAACGTAGAAAGTCTTTACA
AATAAGTGCAACTGGCATAGTAATGCTAATAATGAAAGAAGTCAATAAATACTTTACTAATTTAATGTAG
ACTGTGTTATGCAGATGTTTTGTCCAAAAAAAAATCTTGGTGAAATTGGTAAACGTAGAAAGTCTTTACA
AATAAATGCAAACACAAAAATTATATTAATATTAAAGGTGGTCAATAAATACTTTACTAATGTGTGTAGG
CTGTTATGCAGATGTTTTGTCCAAAAAAAAAATATCGTAGTGAATTTGATAAATGTAGAAAGTCTTTACC
AATAATTTCAAATGTCATATAATGTACACTTAATAATAAAAGAGGTCAATAAATACTTTACTAACGTATG
TTGGCTGTGTTATGCAGATGTTTTGTCCAAAAATATCGCAGTAAAATTAGTAAACGTAGAAAATCTTTAC
AAATAAATGCAAATAGCATAAAATGTAATATTAATAAAGAAAGTGGTCAATAAATACTTTACTATTGTAC
GTTGACTGTGTTATACTGATGATTTGTCCCAAATCTTTATCTCAGATGCAATTTTAAGAGCTAACAGAGG
TAGTGAACCGTCATTCTTCTACTCGAAAGAGGTTTGATGAGACTTCTTTCACAAGCGTAGTGTTGGTTTT
ATGTTATACCAGGAACTCAACTGCAGTTTTATTAACGACACGTTTATGAACAATCAAATGGTCCTCGTAA
AAATTTATTGAAGGACATAAAAGCATGCACGACCACTTGACGAATATAGCCGCAGTTGTGGTGCGTTTTC
GGGCGTCTTACTATTCCCACCGCCCCGATTTGTTTAAAATTTCATTTTATGAGGGATATCCCAATTGTAC
TTGTTTGAAACTAGAGCAAAATAAGACTTCAGTGCGTAAAAGCAACCCTTTAGACAACACAAGCGCCTAT
ATTTGTCACAATTATTGTATTGGGTCCTTTTCAATTGTATAAATTAATACTGAAGCTGAGAAAGACATGT
ATAACCGTTTCTTTTGCCTAATTGCATTTAATAAATAACATTGTGAAGTGTGAGATGCGCACAAGGCTAG
CCACAGCACAGTAGCATTGGCTCGACAGAGATTGATTACACCAACAAATAGTGCCTTTTTAGTGCCGTTA
ACACACACTTTGCTGTTCAGTTTAAGTTCAAATAACTATCTACGTTAATCACTTGCCTCATAATACATTA
GAAACGAAGCCTTTTATTATGTTTACGCTCATTTTAAAAAGAAAACATTAGTATTAAGCAACCTTACTGC
AAGCTCGAAGTGCATTGCTGTTCCAGGAGAACGCGCGCATTGATCTGCTGTGCAGTTTTTTCAGGGGGTA
AATTCAATCACGTGTTCCACAGGCGTCCAATCCCAGCTGGGGAAGCTTTCTGAAATAATTACCTGTCTTG
ATTGTTCTACGGTCAGATAAAAAAGTACACATACACTCCATATAATAATCGGATGCATGTAAAAGAGAAG
GGAAACATCGCC