ZFLNCG13039
Basic Information
Genome Browser
Express profile
Download
Express in top 10 samples
Sample | Tissue | Condition | FPKM |
---|---|---|---|
SRR1104059 | heart | kctd10 mut | 158.46 |
SRR1004787 | larvae | impdh1a morpholino | 133.77 |
SRR1035981 | 13 hpf | rx3+/+ or rx3+/- | 123.50 |
SRR1035978 | 13 hpf | rx3-/- | 113.95 |
SRR1104058 | heart | normal | 108.45 |
SRR514030 | retina | id2a morpholino | 98.76 |
SRR1004789 | larvae | impdh2 morpholino | 95.73 |
SRR800037 | egg | normal | 80.42 |
SRR658535 | bud | Gata5 morphant | 67.00 |
SRR658539 | bud | Gata5/6 morphant | 61.22 |
Express in tissues
Correlated coding gene
Download
gene | correlation coefficent |
---|---|
lamtor1 | 0.63 |
zgc:174651 | 0.59 |
helq | 0.57 |
zgc:112977 | 0.56 |
LOC101883108 | 0.56 |
zgc:171551 | 0.55 |
zcchc17 | 0.54 |
LOC101886556 | 0.54 |
si:ch73-299h12.3 | 0.53 |
LOC101887193 | 0.53 |
Gene Ontology
Download
GO | P value |
---|---|
GO:0032439 | 7.11e-04 |
GO:0032008 | 2.84e-03 |
GO:0001919 | 3.55e-03 |
GO:0042632 | 4.96e-03 |
GO:0055092 | 4.96e-03 |
GO:0044699 | 6.81e-03 |
GO:0080171 | 7.79e-03 |
GO:0071230 | 7.79e-03 |
GO:0007040 | 7.79e-03 |
GO:0032006 | 1.13e-02 |
GO:0071986 | 3.55e-03 |
GO:0005575 | 5.57e-03 |
GO:0031902 | 8.50e-03 |
GO:0090544 | 9.20e-03 |
GO:0045121 | 1.27e-02 |
GO:0098857 | 1.27e-02 |
GO:0070603 | 1.97e-02 |
GO:0010008 | 2.88e-02 |
GO:0044440 | 3.70e-02 |
GO:0003676 | 1.63e-04 |
GO:0004958 | 1.42e-03 |
GO:0004960 | 2.84e-03 |
GO:0004957 | 5.67e-03 |
GO:1901363 | 5.95e-03 |
GO:0097159 | 6.31e-03 |
GO:0004955 | 6.38e-03 |
GO:0004954 | 6.38e-03 |
GO:0004953 | 7.09e-03 |
GO:0046872 | 2.09e-02 |
KEGG Pathway
KEGG pathway of this lncRNA gene hava does not exist!
Conservation
Zebrafish lncRNA Transcript | Human lncRNA Transcript | Mouse lncRNA Transcript | Methods |
---|---|---|---|
ZFLNCT20237 | ENST00000419267; NONHSAT001190; | ENSMUST00000182298; NONMMUT088800; | Direct blastn |
OMIM
OMIM of this lncRNA gene hava does not exist!
Sequence Download
>ZFLNCG13039
TGGGGAGTGTGACAGGGTTCAAATAGAGAAATTAAACAATCAAACGAAAATAGCGTGGTTATCATTGTAC
AATAATATTTTATATTTATAGTCCTTTACATTACAATATTTGATTGCATTTAATTAAATTTTCCATTAAC
TGTATCTTTTATATTATATTGGACAAAGCAATCAAGGAATGTCAGTATTTTACAATATTAACATAATTAT
ACTAAATCATAAAATATGCTTTAAAAATCTAGTTATCCTTTAACCAATTAAATATGAGTTATATTTTATT
ACTTCTAGCTATACATTTAATTAAATAAAACAAACCTGGTAGTCCCTTAATCCAATGAGTATAATGTCTG
ACGTGTTGATCCACACCTTAACAAGAAAAGAAAAAAGATCATACATAAGAGGAACGTTCAATAGCTAACA
TTACACCGTAGCATCAATTAATTAACAAGACAGCACAACATTTTTCTAACATATCAGTCCAGCATCCAGT
TGATTCCCACAGAGATGAAAACGCTGAATCTGCATTCAGCCTGAAGCTCTAAAATGCACCTTTTTCCGGA
GCTTTCCTCGGATGTGACAAAGCCGCTTGACTCCATCGAAACACATGGCCTCCAGTCTCCCATTTCCCAA
CATCTTGATGACCTGAGCATATTCTAAAAGACAGAAAAGGCTTTTTAAACACAAACTAGTTCATGTGAAT
TCAATAAAACAGTTGAATATAGATTATATGGAAGAGTATTACAACACACCTTGTCCATCCTCTTTGAACA
CCAGCTCTCTCTTCTCAGATTCATTCTCGTTCTTACCACGTCGCCTATTTTTTCCTCCTTTTCCTGAATA
AAGAAGAATAAAATTGGATCAGATGCCATCATATAATCGGAAACAATGCCAACAAACACATTAACTGTGT
GACAATAATGAAATGTTGCCTAACGACTGAGCAAAGTACATCCAACACAATGTCAGTATGATGGATGACA
TCATAACACTGGATTAATTTCATATAAAACATTTACATAACAACATAAACACAGATTAACATTCAAAAAG
ATCTTAAAATTATTCAAATGAAAAGCTAACGTAGATTTAACAAATTCGCTACTATCCAACTGCGTAACAC
ATAAAGCGGCCCGCCGCATCGTGTTTATTTCTTGACAGCAAGATTTATTTCGTATTATGTAGACAAATAC
ATTAAAAATAAGTTAGAAATAAATTAATGTTGGACATTTTAAAATCAAACATTCACAATTCACTGCTATA
TTCAATATCTCGCGCAATGGCTCGCGTTACCTTGTTAGCTCATTTCAAGGCTAACATTTCACACGACTAC
CTTTCAAAACCGCCTTACCTTTGTTTTTCGGCATATTTGTTTAAGCACGTCGACGGCTGTCGTGTAAAGA
TCAGAAACGTCAGGGAGTTATAACCATATGTCAAAGATTTTACTTCTCAAACGTGCTGTTGGTGAGCAGA
TCAGCGCCGCTTGCGAGAAAAG
TGGGGAGTGTGACAGGGTTCAAATAGAGAAATTAAACAATCAAACGAAAATAGCGTGGTTATCATTGTAC
AATAATATTTTATATTTATAGTCCTTTACATTACAATATTTGATTGCATTTAATTAAATTTTCCATTAAC
TGTATCTTTTATATTATATTGGACAAAGCAATCAAGGAATGTCAGTATTTTACAATATTAACATAATTAT
ACTAAATCATAAAATATGCTTTAAAAATCTAGTTATCCTTTAACCAATTAAATATGAGTTATATTTTATT
ACTTCTAGCTATACATTTAATTAAATAAAACAAACCTGGTAGTCCCTTAATCCAATGAGTATAATGTCTG
ACGTGTTGATCCACACCTTAACAAGAAAAGAAAAAAGATCATACATAAGAGGAACGTTCAATAGCTAACA
TTACACCGTAGCATCAATTAATTAACAAGACAGCACAACATTTTTCTAACATATCAGTCCAGCATCCAGT
TGATTCCCACAGAGATGAAAACGCTGAATCTGCATTCAGCCTGAAGCTCTAAAATGCACCTTTTTCCGGA
GCTTTCCTCGGATGTGACAAAGCCGCTTGACTCCATCGAAACACATGGCCTCCAGTCTCCCATTTCCCAA
CATCTTGATGACCTGAGCATATTCTAAAAGACAGAAAAGGCTTTTTAAACACAAACTAGTTCATGTGAAT
TCAATAAAACAGTTGAATATAGATTATATGGAAGAGTATTACAACACACCTTGTCCATCCTCTTTGAACA
CCAGCTCTCTCTTCTCAGATTCATTCTCGTTCTTACCACGTCGCCTATTTTTTCCTCCTTTTCCTGAATA
AAGAAGAATAAAATTGGATCAGATGCCATCATATAATCGGAAACAATGCCAACAAACACATTAACTGTGT
GACAATAATGAAATGTTGCCTAACGACTGAGCAAAGTACATCCAACACAATGTCAGTATGATGGATGACA
TCATAACACTGGATTAATTTCATATAAAACATTTACATAACAACATAAACACAGATTAACATTCAAAAAG
ATCTTAAAATTATTCAAATGAAAAGCTAACGTAGATTTAACAAATTCGCTACTATCCAACTGCGTAACAC
ATAAAGCGGCCCGCCGCATCGTGTTTATTTCTTGACAGCAAGATTTATTTCGTATTATGTAGACAAATAC
ATTAAAAATAAGTTAGAAATAAATTAATGTTGGACATTTTAAAATCAAACATTCACAATTCACTGCTATA
TTCAATATCTCGCGCAATGGCTCGCGTTACCTTGTTAGCTCATTTCAAGGCTAACATTTCACACGACTAC
CTTTCAAAACCGCCTTACCTTTGTTTTTCGGCATATTTGTTTAAGCACGTCGACGGCTGTCGTGTAAAGA
TCAGAAACGTCAGGGAGTTATAACCATATGTCAAAGATTTTACTTCTCAAACGTGCTGTTGGTGAGCAGA
TCAGCGCCGCTTGCGAGAAAAG