ZFLNCG13246
Basic Information
Chromesome: chr24
Start: 43894865
End: 43896170
Transcript: ZFLNCT20563 ZFLNCT20564 ZFLNCT20565
Known as:
Genome Browser
Express profile
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Express in top 10 samples
Sample | Tissue | Condition | FPKM |
---|---|---|---|
ERR145631 | skeletal muscle | 32 degree_C to 16 degree_C | 35.33 |
SRR519752 | 7 dpf | VD3 treatment | 33.30 |
SRR519732 | 7 dpf | FETOH treatment | 32.30 |
ERR145635 | skeletal muscle | 27 degree_C to 16 degree_C | 32.11 |
SRR519747 | 6 dpf | VD3 treatment | 24.73 |
ERR594416 | retina | transgenic flk1 | 24.11 |
ERR145646 | skeletal muscle | 32 degree_C to 27 degree_C | 23.42 |
SRR519727 | 6 dpf | FETOH treatment | 22.90 |
SRR519742 | 4 dpf | VD3 treatment | 21.08 |
SRR519717 | 2 dpf | FETOH treatment | 20.74 |
Express in tissues
Correlated coding gene
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gene | correlation coefficent |
---|---|
hdc | 0.60 |
slc25a47a | 0.59 |
LOC100330797 | 0.59 |
zgc:172106 | 0.59 |
fbxl3b | 0.58 |
fnip1 | 0.57 |
ssh2b | 0.57 |
cnr1 | 0.57 |
sptssb | 0.56 |
LOC560232 | 0.56 |
Gene Ontology
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GO | P value |
---|---|
GO:0035351 | 2.98e-03 |
GO:0065007 | 8.10e-03 |
GO:1901564 | 8.65e-03 |
GO:0031174 | 8.93e-03 |
GO:1902743 | 8.93e-03 |
GO:0010591 | 8.93e-03 |
GO:2000253 | 8.93e-03 |
GO:0006665 | 1.13e-02 |
GO:1901678 | 1.19e-02 |
GO:0090630 | 1.19e-02 |
GO:0017059 | 5.96e-03 |
GO:0031211 | 5.96e-03 |
GO:0002178 | 5.96e-03 |
GO:0070449 | 8.93e-03 |
GO:0033503 | 8.93e-03 |
GO:0005964 | 1.19e-02 |
GO:0031371 | 1.48e-02 |
GO:0042734 | 3.24e-02 |
GO:0030131 | 3.52e-02 |
GO:0030119 | 3.52e-02 |
GO:0016831 | 2.11e-03 |
GO:0004758 | 2.98e-03 |
GO:0016830 | 5.42e-03 |
GO:0016262 | 5.96e-03 |
GO:0004140 | 5.96e-03 |
GO:0004949 | 5.96e-03 |
GO:0030170 | 8.28e-03 |
GO:0005093 | 8.93e-03 |
GO:0004689 | 1.19e-02 |
GO:0003674 | 1.60e-02 |
KEGG Pathway
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Conservation
Zebrafish lncRNA Transcript | Human lncRNA Transcript | Mouse lncRNA Transcript | Methods |
---|---|---|---|
ZFLNCT20565 | NONMMUT012105; | Direct blastn |
OMIM
OMIM of this lncRNA gene hava does not exist!
Sequence Download
>ZFLNCG13246
GAGCGTGTCAGCAATTTGGGACACGCCCCTCCTCCTCTGCCGGTGGGCGGAGTCTGAGTCTCAGTTGACT
TCAGTAAGTTTGAGCCGCAGACCCGCAGCTGCCGCGTCTGGTGAGTTTACCGTTTCTTTACTCAGTTCGG
CTCATTCTACCGGTGTACCGGCGTTTACCGTCACCGCAGAACTACAGCGGCGCAGGGTAACGGCTGAAGA
TGGCGGAGCGGTAACAGGCCTGATCCAGATTAAACCCGTTTAACGCTGCTGACAGACATAAACACACACA
CGCCTGAACGAGTGTAAGAAACACACGGGTGTGTGAGACCGGACAGCTGTGTGTTTGTGTGTATGTGTAA
TCCGTGTGACAGTTGCGTGCGTGTTTGTGTGTGTGTGTGTGTGTGTCAGCTCTGACAGTTTATCTGTCGT
TTGGTTGCGCTGTGCTAATGTGTTAGCCTGTTAGCATGAGTTAGCGTATAAACGGCGGAATAAAGCGGTT
TTCGGGCTGATTTAAGCACAGAGTGGACTCAGATGAACACCGAACCGAACACACACACTCCTCTACACTC
ATTAGTGTGTGTTTGAAGAGTCATTAATGAGCTGCGCAGGCCGCAGACAAACACCGATACACACAGATCA
GCAGGAGCTCAGCTGAACACACACACACACACACACACCTCAGCTGAACTATTACTGTTCACACACACTC
TGCTCAATCAGTGTGTGTGACAACAGATCGCTCCTGCAGACCCAAACTGAACAACAACACACAAACTGAG
AGAGAGAGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTTAGCAGTGTTTCTTCCATGAGCCCTCGGGTCAG
AGGTCACCCAGCCGGCCATTGCTGATGGTCAACGCGGAAACTACACAAACTTCAGCCTGTGCTCGTCTGC
AGTGTGTGTCTCGTCTGTGTGTGTGTTTGTACTGATGGTGTGTGTCGTGTAGTGACGATGATGTGTATGT
TGTCTAATTATAATGAGGATGTGTGTGTGTGTGTGTGTGTGTGTGTTGCAGTGAATCATGGCTCGCAGTG
ACGGCTGAGGATCAGTGGCGTCTCTCACACACTTCTGACGTAAGTCCAGCAGCTCCTGTGTGTGTGTGTG
TGTGTGTGTGTCCTGAAGCGGGTGAGTTTAGCCAGATCAGGTCAGTGTGTTCGAGGAGTGTTGAAGGTGC
TCCTGTTACCGTGGCAACAGAGTGAGCAATCTCCCGAACCGGCTTAACTGATCCAGCTCTGAGGAACCGA
CTGCTCTCACTGCGCCCCCTACAGGAGAGGAGCACACACACACAC
GAGCGTGTCAGCAATTTGGGACACGCCCCTCCTCCTCTGCCGGTGGGCGGAGTCTGAGTCTCAGTTGACT
TCAGTAAGTTTGAGCCGCAGACCCGCAGCTGCCGCGTCTGGTGAGTTTACCGTTTCTTTACTCAGTTCGG
CTCATTCTACCGGTGTACCGGCGTTTACCGTCACCGCAGAACTACAGCGGCGCAGGGTAACGGCTGAAGA
TGGCGGAGCGGTAACAGGCCTGATCCAGATTAAACCCGTTTAACGCTGCTGACAGACATAAACACACACA
CGCCTGAACGAGTGTAAGAAACACACGGGTGTGTGAGACCGGACAGCTGTGTGTTTGTGTGTATGTGTAA
TCCGTGTGACAGTTGCGTGCGTGTTTGTGTGTGTGTGTGTGTGTGTCAGCTCTGACAGTTTATCTGTCGT
TTGGTTGCGCTGTGCTAATGTGTTAGCCTGTTAGCATGAGTTAGCGTATAAACGGCGGAATAAAGCGGTT
TTCGGGCTGATTTAAGCACAGAGTGGACTCAGATGAACACCGAACCGAACACACACACTCCTCTACACTC
ATTAGTGTGTGTTTGAAGAGTCATTAATGAGCTGCGCAGGCCGCAGACAAACACCGATACACACAGATCA
GCAGGAGCTCAGCTGAACACACACACACACACACACACCTCAGCTGAACTATTACTGTTCACACACACTC
TGCTCAATCAGTGTGTGTGACAACAGATCGCTCCTGCAGACCCAAACTGAACAACAACACACAAACTGAG
AGAGAGAGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTTAGCAGTGTTTCTTCCATGAGCCCTCGGGTCAG
AGGTCACCCAGCCGGCCATTGCTGATGGTCAACGCGGAAACTACACAAACTTCAGCCTGTGCTCGTCTGC
AGTGTGTGTCTCGTCTGTGTGTGTGTTTGTACTGATGGTGTGTGTCGTGTAGTGACGATGATGTGTATGT
TGTCTAATTATAATGAGGATGTGTGTGTGTGTGTGTGTGTGTGTGTTGCAGTGAATCATGGCTCGCAGTG
ACGGCTGAGGATCAGTGGCGTCTCTCACACACTTCTGACGTAAGTCCAGCAGCTCCTGTGTGTGTGTGTG
TGTGTGTGTGTCCTGAAGCGGGTGAGTTTAGCCAGATCAGGTCAGTGTGTTCGAGGAGTGTTGAAGGTGC
TCCTGTTACCGTGGCAACAGAGTGAGCAATCTCCCGAACCGGCTTAACTGATCCAGCTCTGAGGAACCGA
CTGCTCTCACTGCGCCCCCTACAGGAGAGGAGCACACACACACAC