sample tissue condition fpkm SRR1205160 5dpf transgenic sqET20 and GFP+ 16.4398 SRR1562529 intestine and pancreas normal 14.0563 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 13.3839 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 12.637 SRR1299125 caudal fin Half day time after treatment 11.565 SRR1299124 caudal fin Zero day time after treatment 9.973410000000001 SRR1039571 gastrointestinal diet 0.1 NPM 9.09551 SRR1299129 caudal fin Seven days time after treatment 7.882280000000001 SRR941753 posterior pectoral fin normal 7.77658 SRR1299126 caudal fin One day time after treatment 7.675860000000001 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.613639999999999 SRR1708346 embryo SIBPS 6.96988 SRR941749 anterior pectoral fin normal 6.8861300000000005 SRR1708344 embryo MUTPS 6.86072 SRR516123 skin male and 3.5 year 6.72893 SRR1039573 gastrointestinal diet 0.75 NPM 6.59657 SRR1534351 larvae 500 ug/l BDE47 treatment 6.522480000000001 SRR1299128 caudal fin Three days time after treatment 5.87239 SRR1299127 caudal fin Two days time after treatment 5.784669999999999 SRR1028002 head normal 5.62854 SRR527844 24hpf normal 5.20749 SRR1028003 head normal 5.12432 SRR527836 24hpf normal 5.06834 SRR516133 skin male and 5 month 4.99752 SRR516131 skin male and 5 month 4.8034300000000005 SRR372802 5 dpf normal 4.70446 SRR535978 larvae normal 4.695869999999999 SRR516121 skin male and 3.5 year 4.65402 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 4.63965 SRR535986 larvae nhsl1b mut 4.58968 SRR658537 bud Gata6 morphant 4.50974 SRR1104059 heart kctd10 mut 4.42328 SRR658545 6 somite Gata6 morphant 4.4227300000000005 SRR658547 6 somite Gata5/6 morphant 4.420669999999999 SRR372798 28 hpf normal 4.41453 SRR1028004 head normal 4.25972 SRR1534350 larvae 5 ug/l BDE47 treatment 4.2064699999999995 SRR372800 2 dpf normal 4.184830000000001 SRR535943 larvae vangl mut 4.17555 SRR516124 skin male and 3.5 year 4.17164 SRR749515 24 hpf eif3ha morphant 4.16904 SRR1104058 heart normal 4.16326 SRR658539 bud Gata5/6 morphant 4.143330000000001 SRR527840 24hpf normal 4.10128 SRR516125 skin male and 3.5 year 4.03759 SRR535913 larvae krox mut 3.9420800000000003 SRR776507 embryo normal 3.90196 SRR1534349 larvae DMSO vehicle 3.7672800000000004 SRR516129 skin male and 5 month 3.7179699999999998 SRR516126 skin male and 5 month 3.69478 SRR797917 embryo pbx2/4-MO and prdm1-/- 3.6762699999999997 SRR797914 embryo pbx2/4-MO 3.6353699999999995 SRR776509 embryo Salmonella infected 3.62736 SRR1167756 embryo mpeg1 morpholino 3.61035 SRR797911 embryo prdm1-/- 3.5893900000000003 SRR658543 6 somite Gata5 morphan 3.5567699999999998 SRR372796 bud normal 3.51128 SRR797908 embryo normal 3.50105 SRR1523211 embryo control morpholino 3.4977699999999996 SRR1167752 embryo normal 3.47646 SRR1291414 5 dpi normal 3.4664699999999997 SRR1708343 embryo MUTAS 3.4184699999999997 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.4071599999999997 SRR658541 6 somite normal 3.35335 SRR658533 bud normal 3.34585 SRR658535 bud Gata5 morphant 3.3454800000000002 SRR535847 larvae normal 3.3402199999999995 SRR535926 larvae normal 3.31429 SRR1004786 larvae control morpholino 3.3087199999999997 SRR1004789 larvae impdh2 morpholino 3.28453 SRR1342218 embryo marco morpholino 3.2679 SRR776508 embryo miR-146 knockdown 3.1528 SRR1167753 embryo bacterial infection 3.13512 SRR610741 3 dpf express Ras 3.13052 SRR630464 5 dpf injected epidermidis 3.12777 SRR1523214 embryo glut12 morpholino 3.12705 SRR535890 larvae normal 3.1266700000000003 SRR1708345 embryo SIBAS 3.09972 SRR1342217 embryo infection with Mycobacterium marinum 3.08898 SRR776510 embryo Salmonella infected and miR-146 knockdown 3.08833 SRR630463 5 dpf normal 3.0564 SRR1188160 embryo Insulin 4 hpi 3.05389 SRR633516 larvae normal 3.0426599999999997 SRR610740 3 dpf normal 3.04026 SRR633550 larvae exposed to hypoxia stress 3.00555 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.97575 SRR516128 skin male and 5 month 2.94767 SRR516127 skin male and 5 month 2.90517 SRR1004788 larvae impdh1b morpholino 2.89007 SRR749514 24 hpf normal 2.8813299999999997 SRR1291417 5 dpi injected marinum 2.84128 SRR535852 larvae hoxb1b mut 2.82347 SRR535851 larvae normal 2.79082 SRR516122 skin male and 3.5 year 2.772 SRR516134 skin male and 5 month 2.72986 SRR1342216 embryo norml 2.70844 SRR535849 larvae normal 2.66201 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.6507099999999997 SRR535850 larvae hoxb1b mut 2.59575 SRR1188148 embryo Control PBS 0.5 hpi 2.5325 SRR1035978 13 hpf rx3-/- 2.4012 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.20607 SRR942769 embryo myd88+/+ 2.1735700000000002 SRR516132 skin male and 5 month 2.1730400000000003 SRR831692 embryo normal 2.14838 SRR535848 larvae hoxb1b mut 2.13273 SRR610742 3 dpf express NICD 2.1137 SRR1188152 embryo Insulin 0.5 hpi 2.1125700000000003 SRR1004787 larvae impdh1a morpholino 2.09537 ERR023146 head kidney normal 2.07697 SRR038627 embryo control morpholino 2.05891 SRR527832 16-36 hpf normal 1.9794200000000002 SRR1035984 13 hpf normal 1.96531 SRR891512 blood normal 1.9646099999999997 SRR942764 embryo myd88-/- 1.96212 SRR527833 5 dpf normal 1.87805 SRR516130 skin male and 5 month 1.87296 SRR1167762 embryo ptpn6 morpholino 1.84378 SRR038625 embryo traf6 morpholino 1.8294700000000002 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.7902099999999999 SRR726542 5 dpf infection with control 1.6964700000000001 SRR726540 5 dpf normal 1.68957 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.64605 SRR519722 4 dpf FETOH treatment 1.6143100000000001 SRR038624 embryo traf6 morpholino and bacterial infection 1.57728 SRR633544 larvae exposed to cold stress 1.56782 SRR527834 head normal 1.54518 SRR1005530 embryo RPL11 morpholino 1.5194 SRR519732 7 dpf FETOH treatment 1.47054 SRR519747 6 dpf VD3 treatment 1.41177 SRR519742 4 dpf VD3 treatment 1.4051 SRR1004785 larvae normal 1.39741 SRR519727 6 dpf FETOH treatment 1.38268 SRR592701 pineal gland normal 1.33823 SRR519752 7 dpf VD3 treatment 1.33334 SRR516135 skin male and 5 month 1.32683 SRR1188156 embryo Control PBS 4 hpi 1.29627 SRR065197 3 dpf U1C knockout 1.29393 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.2923799999999999 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.27178 SRR519717 2 dpf FETOH treatment 1.21761 SRR1205154 5dpf transgenic sqET20 1.20199 SRR700537 heart Gata4 morpholino 1.18422 SRR1005529 embryo control morpholino 1.16709 SRR801554 embryo control morpholino 1.16545 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.1472799999999999 SRR726541 5 dpf infection with Mycobacterium marinum 1.14669 SRR801555 embryo RPS19 morpholino 1.11496 SRR519737 2 dpf VD3 treatment 1.11048 SRR038626 embryo control morpholino and bacterial infection 1.0853 SRR1562528 eye normal 1.05965 SRR1648854 brain normal 1.01587 SRR801556 embryo RPS19 and p53 morpholino 1.0052299999999998 SRR065196 3 dpf normal 0.947335 SRR1035239 liver transgenic mCherry control 0.9437120000000001 SRR1648856 brain normal 0.923184 SRR514028 retina control morpholino 0.774169 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.7278359999999999 ERR023143 swim bladder normal 0.727472 SRR527835 tail normal 0.7052430000000001 SRR1562531 muscle normal 0.682013 SRR594771 endothelium normal 0.654167 SRR592703 pineal gland normal 0.503352 SRR592700 pineal gland normal 0.47933000000000003 SRR1569495 embryo normal 0.371967 SRR592699 pineal gland normal 0.335598 SRR1569491 embryo normal 0.32254499999999997 SRR592698 pineal gland normal 0.31255700000000003 SRR592702 pineal gland normal 0.291975 SRR594769 blood normal 0.26777199999999995 SRR700534 heart control morpholino 0.241495 SRR1647681 head kidney SVCV treatment 0.224948 SRR748489 egg normal 0.21463000000000002 SRR1648855 brain normal 0.1809 SRR1048059 pineal gland light 0.166168 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.163057 SRR1562533 testis normal 0.159026 ERR023145 heart normal 0.14269 SRR514030 retina id2a morpholino 0.140281 SRR1035237 liver transgenic UHRF1 0.0994867 SRR1562530 liver normal 0.0929657 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.0909792 SRR1562532 spleen normal 0.08510160000000001 SRR1647679 head kidney normal 0.0750308 SRR372793 shield normal 0.0711652 SRR891511 brain normal 0.0678441 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.059533800000000005 SRR1048061 pineal gland dark 0.057901999999999995 SRR1647680 head kidney SVCV treatment 0.054669600000000006 SRR800045 muscle normal 0.05224790000000001 SRR1565813 brain normal 0.0450159 ERR594417 retina normal 0.0421549 SRR891495 heart normal 0.0416987 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.038916900000000004 SRR1565815 brain normal 0.0366397 SRR1021215 sphere stage Mzeomesa 0.0343778 SRR372791 dome normal 0.033907099999999996 ERR023144 brain normal 0.0325639 SRR748488 sperm normal 0.031770400000000004 SRR1565817 brain normal 0.029684199999999997 SRR748491 germ ring normal 0.025838599999999996 ERR594416 retina transgenic flk1 0.0252734 SRR800043 sphere stage normal 0.023478299999999997 SRR957181 heart normal 0.0211283 SRR1565807 brain normal 0.0188553 ERR594418 retina transgenic flk1 and develop tumors 0.017184400000000002 SRR1565811 brain normal 0.012974600000000001 SRR1021213 sphere stage normal 0.0099403 SRR1565819 brain normal 0.00787566 SRR1565809 brain normal 0.00560656 SRR1565805 brain normal 0.00484 SRR1049814 256 cell normal 0.00225566