sample tissue condition fpkm SRR1299126 caudal fin One day time after treatment 185.1 SRR1299125 caudal fin Half day time after treatment 184.166 SRR1299129 caudal fin Seven days time after treatment 148.684 SRR1299127 caudal fin Two days time after treatment 145.333 SRR1299124 caudal fin Zero day time after treatment 87.5631 SRR1299128 caudal fin Three days time after treatment 81.631 SRR1648856 brain normal 62.5096 SRR535978 larvae normal 37.1075 SRR1708346 embryo SIBPS 36.8674 SRR1708344 embryo MUTPS 30.0531 SRR1648854 brain normal 26.8951 ERR023146 head kidney normal 26.3315 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 24.7542 SRR372802 5 dpf normal 24.2811 SRR535986 larvae nhsl1b mut 24.1969 SRR1291417 5 dpi injected marinum 23.8184 SRR1205160 5dpf transgenic sqET20 and GFP+ 23.475 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 23.1269 SRR516131 skin male and 5 month 22.8283 SRR630464 5 dpf injected epidermidis 21.9315 SRR516133 skin male and 5 month 21.7809 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 21.0942 SRR1167763 embryo ptpn6 morpholino and bacterial infection 20.997 SRR516130 skin male and 5 month 20.6799 SRR1648855 brain normal 20.5639 SRR1291414 5 dpi normal 20.1629 SRR516129 skin male and 5 month 19.5201 SRR630463 5 dpf normal 19.2134 SRR516134 skin male and 5 month 19.1799 SRR1569491 embryo normal 19.1127 ERR023145 heart normal 18.9139 SRR516123 skin male and 3.5 year 18.7961 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 18.5541 SRR1167753 embryo bacterial infection 17.2721 SRR942769 embryo myd88+/+ 17.2663 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 16.9265 SRR516126 skin male and 5 month 16.601 SRR1708345 embryo SIBAS 16.4592 SRR516121 skin male and 3.5 year 16.2169 SRR1167757 embryo mpeg1 morpholino and bacterial infection 16.054000000000002 SRR516125 skin male and 3.5 year 15.8992 SRR1523211 embryo control morpholino 15.442 SRR516132 skin male and 5 month 15.2095 SRR516127 skin male and 5 month 15.1737 SRR1167752 embryo normal 15.1189 SRR1039571 gastrointestinal diet 0.1 NPM 14.9362 ERR023143 swim bladder normal 14.7339 SRR1342217 embryo infection with Mycobacterium marinum 14.5816 SRR776507 embryo normal 14.3025 SRR1342218 embryo marco morpholino 13.922 SRR516122 skin male and 3.5 year 13.5702 SRR942764 embryo myd88-/- 13.095999999999998 SRR1167756 embryo mpeg1 morpholino 12.7532 SRR1167762 embryo ptpn6 morpholino 12.5601 SRR1035239 liver transgenic mCherry control 12.4846 SRR516124 skin male and 3.5 year 12.2823 SRR372800 2 dpf normal 12.2714 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 12.26 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 12.2392 SRR516128 skin male and 5 month 12.1016 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 11.9711 SRR527840 24hpf normal 11.720999999999998 SRR776510 embryo Salmonella infected and miR-146 knockdown 11.6998 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 11.4095 SRR1562528 eye normal 11.3087 SRR1523214 embryo glut12 morpholino 11.1053 SRR1534350 larvae 5 ug/l BDE47 treatment 10.6516 SRR1035237 liver transgenic UHRF1 10.6268 SRR776508 embryo miR-146 knockdown 10.0828 SRR610740 3 dpf normal 9.83077 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 9.80608 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 9.630519999999999 SRR372798 28 hpf normal 9.5929 SRR1188152 embryo Insulin 0.5 hpi 9.55777 SRR776509 embryo Salmonella infected 9.52471 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 9.04645 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 8.806280000000001 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 8.746939999999999 SRR1342216 embryo norml 8.17954 SRR1039573 gastrointestinal diet 0.75 NPM 8.02557 SRR1534351 larvae 500 ug/l BDE47 treatment 8.013589999999999 SRR1188160 embryo Insulin 4 hpi 7.9982 SRR1562531 muscle normal 7.96177 SRR527836 24hpf normal 7.81655 SRR1004785 larvae normal 7.767360000000001 SRR1534349 larvae DMSO vehicle 7.69077 SRR516135 skin male and 5 month 7.6809199999999995 SRR527834 head normal 7.59201 SRR610742 3 dpf express NICD 7.574330000000001 SRR1188148 embryo Control PBS 0.5 hpi 7.51612 SRR1205154 5dpf transgenic sqET20 7.486439999999999 SRR1562529 intestine and pancreas normal 7.342460000000001 SRR1708343 embryo MUTAS 7.26388 SRR1028002 head normal 7.24211 SRR527833 5 dpf normal 7.08512 SRR1004786 larvae control morpholino 6.89055 SRR941749 anterior pectoral fin normal 6.88006 SRR527844 24hpf normal 6.599360000000001 SRR065196 3 dpf normal 6.44684 ERR023144 brain normal 6.34997 SRR1569495 embryo normal 6.31731 SRR749515 24 hpf eif3ha morphant 6.1483300000000005 SRR700534 heart control morpholino 6.1428 SRR1647681 head kidney SVCV treatment 6.03445 SRR065197 3 dpf U1C knockout 5.99003 SRR1188156 embryo Control PBS 4 hpi 5.97225 SRR535848 larvae hoxb1b mut 5.94086 SRR1562530 liver normal 5.80777 SRR610741 3 dpf express Ras 5.7104099999999995 SRR1004788 larvae impdh1b morpholino 5.69019 SRR1647684 spleen SVCV treatment 5.62194 SRR535851 larvae normal 5.51274 SRR1647683 spleen SVCV treatment 5.47052 SRR797914 embryo pbx2/4-MO 5.340269999999999 SRR1028004 head normal 5.19004 ERR594417 retina normal 5.1846 SRR797917 embryo pbx2/4-MO and prdm1-/- 5.17336 SRR514028 retina control morpholino 5.1302900000000005 SRR535852 larvae hoxb1b mut 5.1083 SRR797911 embryo prdm1-/- 5.02168 SRR1647682 spleen normal 4.94254 SRR1647680 head kidney SVCV treatment 4.83694 SRR1028003 head normal 4.68891 SRR941753 posterior pectoral fin normal 4.6642 SRR800045 muscle normal 4.53216 SRR519752 7 dpf VD3 treatment 4.4547300000000005 ERR594416 retina transgenic flk1 4.45324 SRR1005529 embryo control morpholino 4.43924 SRR801554 embryo control morpholino 4.43256 SRR797908 embryo normal 4.38889 SRR700537 heart Gata4 morpholino 4.3486400000000005 SRR535850 larvae hoxb1b mut 4.31155 SRR519747 6 dpf VD3 treatment 4.20715 SRR519732 7 dpf FETOH treatment 4.20516 SRR519742 4 dpf VD3 treatment 4.20035 SRR594771 endothelium normal 4.17282 SRR519727 6 dpf FETOH treatment 4.14851 SRR658533 bud normal 4.11723 SRR535849 larvae normal 4.10781 SRR749514 24 hpf normal 3.8711 SRR535847 larvae normal 3.8467599999999997 SRR038624 embryo traf6 morpholino and bacterial infection 3.79345 SRR658545 6 somite Gata6 morphant 3.7434 SRR658539 bud Gata5/6 morphant 3.7317 SRR658537 bud Gata6 morphant 3.70048 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.6305400000000003 SRR658547 6 somite Gata5/6 morphant 3.5774199999999996 SRR658541 6 somite normal 3.5641599999999998 SRR592698 pineal gland normal 3.54414 SRR514030 retina id2a morpholino 3.4754 SRR372796 bud normal 3.42343 SRR519722 4 dpf FETOH treatment 3.38346 SRR1647679 head kidney normal 3.3832800000000005 SRR726540 5 dpf normal 3.37964 SRR801556 embryo RPS19 and p53 morpholino 3.32479 SRR801555 embryo RPS19 morpholino 3.30945 SRR1562532 spleen normal 3.24269 SRR658543 6 somite Gata5 morphan 3.22269 SRR658535 bud Gata5 morphant 3.1289 SRR519717 2 dpf FETOH treatment 3.11082 SRR1005530 embryo RPL11 morpholino 2.95648 SRR594769 blood normal 2.8696599999999997 SRR038626 embryo control morpholino and bacterial infection 2.8666 SRR535943 larvae vangl mut 2.7831900000000003 SRR1035984 13 hpf normal 2.78055 SRR1004787 larvae impdh1a morpholino 2.62415 ERR594418 retina transgenic flk1 and develop tumors 2.5996200000000003 SRR831692 embryo normal 2.58038 SRR726541 5 dpf infection with Mycobacterium marinum 2.53657 SRR633550 larvae exposed to hypoxia stress 2.45959 SRR592699 pineal gland normal 2.4569099999999997 SRR633516 larvae normal 2.41417 SRR535926 larvae normal 2.4028099999999997 SRR519737 2 dpf VD3 treatment 2.30638 SRR633544 larvae exposed to cold stress 2.11307 SRR1035978 13 hpf rx3-/- 2.01805 SRR592701 pineal gland normal 2.00555 SRR038627 embryo control morpholino 1.94323 SRR038625 embryo traf6 morpholino 1.92755 SRR592700 pineal gland normal 1.8967599999999998 SRR535890 larvae normal 1.79283 SRR1104058 heart normal 1.72813 SRR1048059 pineal gland light 1.6893099999999999 SRR1565813 brain normal 1.4858 SRR372793 shield normal 1.45414 SRR891510 muscle normal 1.44377 SRR592702 pineal gland normal 1.4166 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.29433 SRR1565815 brain normal 1.26765 SRR726542 5 dpf infection with control 1.24285 SRR1565807 brain normal 1.0606799999999998 SRR1565811 brain normal 1.01719 SRR1565805 brain normal 0.952507 SRR1565817 brain normal 0.9336979999999999 SRR527832 16-36 hpf normal 0.8421350000000001 SRR1562533 testis normal 0.820034 SRR1104059 heart kctd10 mut 0.7809050000000001 SRR1565819 brain normal 0.770875 SRR1048061 pineal gland dark 0.722947 SRR748489 egg normal 0.710594 SRR1004789 larvae impdh2 morpholino 0.699654 SRR1565809 brain normal 0.598087 SRR748491 germ ring normal 0.532325 SRR535913 larvae krox mut 0.48977600000000004 SRR527835 tail normal 0.348918 SRR891511 brain normal 0.315626 SRR592703 pineal gland normal 0.23756799999999997 SRR748488 sperm normal 0.162623 SRR1021215 sphere stage Mzeomesa 0.118664 SRR800046 sphere stage 5azaCyD treatment 0.093486 SRR1021213 sphere stage normal 0.00632618 SRR891512 blood normal 0.00228771