sample tissue condition fpkm SRR1299126 caudal fin One day time after treatment 57.2255 ERR023143 swim bladder normal 54.0115 SRR891504 liver normal 47.1246 SRR1299124 caudal fin Zero day time after treatment 41.997 SRR1035239 liver transgenic mCherry control 40.981 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 40.227 SRR1299129 caudal fin Seven days time after treatment 39.068000000000005 SRR1299127 caudal fin Two days time after treatment 37.8949 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 36.0569 SRR1299128 caudal fin Three days time after treatment 31.5317 SRR1299125 caudal fin Half day time after treatment 30.7838 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 26.963 SRR1205160 5dpf transgenic sqET20 and GFP+ 26.2283 SRR516125 skin male and 3.5 year 24.2646 SRR1562531 muscle normal 24.0526 SRR516122 skin male and 3.5 year 21.7668 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 21.2978 SRR516124 skin male and 3.5 year 21.1197 SRR516123 skin male and 3.5 year 18.1933 SRR516126 skin male and 5 month 18.1341 SRR941749 anterior pectoral fin normal 17.9161 SRR516130 skin male and 5 month 17.2335 SRR891510 muscle normal 17.1816 SRR941753 posterior pectoral fin normal 16.1515 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 16.0251 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 15.7387 SRR592698 pineal gland normal 12.4658 ERR594416 retina transgenic flk1 12.4112 SRR592700 pineal gland normal 12.1709 SRR1562532 spleen normal 11.9266 SRR1562533 testis normal 11.1338 SRR516121 skin male and 3.5 year 11.1277 SRR516135 skin male and 5 month 10.9894 SRR1647682 spleen normal 10.6825 SRR1188160 embryo Insulin 4 hpi 10.6754 SRR516128 skin male and 5 month 10.1256 SRR1342216 embryo norml 9.95637 SRR1562530 liver normal 9.85939 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 9.03743 SRR1167756 embryo mpeg1 morpholino 8.87248 SRR516134 skin male and 5 month 8.864239999999999 SRR516129 skin male and 5 month 8.81658 SRR1647683 spleen SVCV treatment 8.80087 SRR516131 skin male and 5 month 8.6733 SRR800045 muscle normal 8.50445 SRR535848 larvae hoxb1b mut 8.48815 SRR1291417 5 dpi injected marinum 8.22648 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 8.09022 SRR1647680 head kidney SVCV treatment 7.979430000000001 ERR023145 heart normal 7.887110000000001 SRR516127 skin male and 5 month 7.787669999999999 SRR1534349 larvae DMSO vehicle 7.5479899999999995 SRR516133 skin male and 5 month 7.492360000000001 SRR1188148 embryo Control PBS 0.5 hpi 7.389010000000001 SRR516132 skin male and 5 month 6.70609 SRR1205154 5dpf transgenic sqET20 6.569260000000001 SRR1291414 5 dpi normal 6.47 SRR1534351 larvae 500 ug/l BDE47 treatment 6.28294 SRR065196 3 dpf normal 6.09946 SRR630464 5 dpf injected epidermidis 5.72969 SRR038627 embryo control morpholino 5.66005 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 5.64856 ERR023146 head kidney normal 5.6249199999999995 SRR1523211 embryo control morpholino 5.5378099999999995 SRR592702 pineal gland normal 5.31025 SRR1004788 larvae impdh1b morpholino 5.26152 SRR1647679 head kidney normal 5.04523 SRR519732 7 dpf FETOH treatment 4.983709999999999 SRR630463 5 dpf normal 4.9746 SRR1534350 larvae 5 ug/l BDE47 treatment 4.8564099999999994 SRR726542 5 dpf infection with control 4.7717 SRR1647681 head kidney SVCV treatment 4.7541 SRR1188156 embryo Control PBS 4 hpi 4.682930000000001 SRR519747 6 dpf VD3 treatment 4.59126 SRR1035237 liver transgenic UHRF1 4.49744 SRR1167752 embryo normal 4.37061 SRR658541 6 somite normal 4.34117 SRR658533 bud normal 4.31556 SRR1039573 gastrointestinal diet 0.75 NPM 4.26541 SRR519727 6 dpf FETOH treatment 4.26055 SRR372796 bud normal 4.0862099999999995 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 3.94447 SRR726541 5 dpf infection with Mycobacterium marinum 3.73711 SRR527834 head normal 3.65476 SRR658535 bud Gata5 morphant 3.5952699999999997 ERR023144 brain normal 3.4713800000000004 SRR1104058 heart normal 3.4245900000000002 SRR1188152 embryo Insulin 0.5 hpi 3.41819 SRR658539 bud Gata5/6 morphant 3.3551699999999998 SRR592701 pineal gland normal 3.33583 SRR658545 6 somite Gata6 morphant 3.3235699999999997 SRR658537 bud Gata6 morphant 3.2726900000000003 SRR1039571 gastrointestinal diet 0.1 NPM 3.0194799999999997 SRR038624 embryo traf6 morpholino and bacterial infection 2.83385 SRR527832 16-36 hpf normal 2.80199 SRR1167753 embryo bacterial infection 2.73906 SRR700534 heart control morpholino 2.714 SRR527836 24hpf normal 2.70168 SRR592699 pineal gland normal 2.6954 SRR535849 larvae normal 2.66265 SRR797914 embryo pbx2/4-MO 2.57619 ERR594417 retina normal 2.45517 SRR658543 6 somite Gata5 morphan 2.4393599999999998 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.12508 SRR527840 24hpf normal 2.09984 SRR519752 7 dpf VD3 treatment 2.05124 SRR749515 24 hpf eif3ha morphant 2.04412 SRR797911 embryo prdm1-/- 2.03393 SRR633550 larvae exposed to hypoxia stress 2.03314 SRR1562529 intestine and pancreas normal 2.0291200000000003 SRR776509 embryo Salmonella infected 1.9719799999999998 SRR658547 6 somite Gata5/6 morphant 1.8993099999999998 SRR610742 3 dpf express NICD 1.8784900000000002 SRR519722 4 dpf FETOH treatment 1.84874 SRR776508 embryo miR-146 knockdown 1.78535 SRR797908 embryo normal 1.7809599999999999 SRR749514 24 hpf normal 1.76047 SRR065197 3 dpf U1C knockout 1.73343 SRR527844 24hpf normal 1.6862099999999998 SRR800046 sphere stage 5azaCyD treatment 1.59565 SRR610741 3 dpf express Ras 1.5778 SRR957181 heart normal 1.4849 SRR519742 4 dpf VD3 treatment 1.4575200000000001 SRR372800 2 dpf normal 1.4494 SRR633516 larvae normal 1.40373 SRR519737 2 dpf VD3 treatment 1.39929 SRR1708344 embryo MUTPS 1.38971 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.37079 SRR372798 28 hpf normal 1.33669 SRR514030 retina id2a morpholino 1.3267 SRR372802 5 dpf normal 1.3134 SRR1647684 spleen SVCV treatment 1.29224 SRR726540 5 dpf normal 1.29109 SRR527833 5 dpf normal 1.28084 SRR519717 2 dpf FETOH treatment 1.18252 SRR891495 heart normal 1.1709399999999999 SRR592703 pineal gland normal 1.1598700000000002 SRR1028002 head normal 1.1290799999999999 SRR1104059 heart kctd10 mut 1.11259 SRR1562528 eye normal 1.10971 SRR1048061 pineal gland dark 1.09495 SRR891512 blood normal 1.08143 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.0682 SRR535847 larvae normal 1.0341799999999999 SRR748489 egg normal 1.0070700000000001 SRR1523214 embryo glut12 morpholino 0.9850559999999999 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.91876 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.902869 SRR1004789 larvae impdh2 morpholino 0.882076 SRR1648856 brain normal 0.879444 SRR700537 heart Gata4 morpholino 0.8612299999999999 SRR1004786 larvae control morpholino 0.861075 SRR1028003 head normal 0.856136 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.8546600000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.8189569999999999 SRR957180 heart 7 days after heart tip amputation 0.81384 SRR1028004 head normal 0.810449 SRR633544 larvae exposed to cold stress 0.786918 SRR1048059 pineal gland light 0.78071 SRR610740 3 dpf normal 0.656963 SRR535850 larvae hoxb1b mut 0.616193 SRR1569491 embryo normal 0.5984689999999999 SRR1708346 embryo SIBPS 0.581918 SRR535852 larvae hoxb1b mut 0.5787720000000001 SRR942769 embryo myd88+/+ 0.544201 SRR1569495 embryo normal 0.529038 SRR942764 embryo myd88-/- 0.51072 SRR535890 larvae normal 0.501939 SRR1342217 embryo infection with Mycobacterium marinum 0.49624399999999996 SRR1035984 13 hpf normal 0.482362 SRR1565805 brain normal 0.48077 SRR1708345 embryo SIBAS 0.47807700000000003 SRR1565811 brain normal 0.47440699999999997 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.47148999999999996 SRR1035978 13 hpf rx3-/- 0.44883100000000004 SRR800049 sphere stage control treatment 0.42142299999999994 SRR1565813 brain normal 0.318687 SRR1565817 brain normal 0.318048 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.306041 SRR535913 larvae krox mut 0.277047 SRR748491 germ ring normal 0.26586 ERR594418 retina transgenic flk1 and develop tumors 0.256352 SRR1565819 brain normal 0.216038 SRR514028 retina control morpholino 0.21386599999999997 SRR1565807 brain normal 0.201241 SRR535926 larvae normal 0.20034100000000002 SRR1648854 brain normal 0.190424 SRR372793 shield normal 0.178804 SRR535851 larvae normal 0.154333 SRR1708343 embryo MUTAS 0.149597 SRR1565809 brain normal 0.144705 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.126957 SRR372791 dome normal 0.11938800000000001 SRR831692 embryo normal 0.119352 SRR594771 endothelium normal 0.0783885 SRR594769 blood normal 0.06705030000000001 SRR1021213 sphere stage normal 0.058001199999999996 SRR800037 egg normal 0.0413439 SRR776507 embryo normal 0.032255400000000004 SRR748490 1 kcell normal 0.024515000000000002 SRR1021215 sphere stage Mzeomesa 0.021333099999999997 SRR1342218 embryo marco morpholino 0.00197256 SRR038625 embryo traf6 morpholino 0.00127607 SRR535978 larvae normal 0.00085254 SRR038626 embryo control morpholino and bacterial infection 0.0007746469999999999 SRR891511 brain normal 0.000672946 SRR1167762 embryo ptpn6 morpholino 0.0005720990000000001 SRR535986 larvae nhsl1b mut 0.000475028 SRR527835 tail normal 0.000465078 SRR801556 embryo RPS19 and p53 morpholino 0.000147529 SRR801555 embryo RPS19 morpholino 0.000110511 SRR1004787 larvae impdh1a morpholino 0.000105288 SRR372789 1K cell normal 3.52423e-05 SRR800043 sphere stage normal 3.27819e-05 SRR1565815 brain normal 3.26711e-05 SRR372787 2-4 cell normal 3.13879e-05 SRR748488 sperm normal 1.45807e-05