sample tissue condition fpkm SRR372796 bud normal 159.507 SRR658537 bud Gata6 morphant 153.424 SRR797914 embryo pbx2/4-MO 151.461 SRR797917 embryo pbx2/4-MO and prdm1-/- 143.708 SRR514028 retina control morpholino 121.647 SRR514030 retina id2a morpholino 107.264 SRR797908 embryo normal 101.016 SRR797911 embryo prdm1-/- 92.34299999999999 SRR1299124 caudal fin Zero day time after treatment 86.4414 SRR1299126 caudal fin One day time after treatment 82.751 SRR527844 24hpf normal 82.4272 SRR1569491 embryo normal 81.301 SRR372793 shield normal 78.5509 SRR1021215 sphere stage Mzeomesa 77.414 SRR372791 dome normal 75.2724 SRR1021213 sphere stage normal 71.6972 SRR519717 2 dpf FETOH treatment 70.0323 SRR527836 24hpf normal 69.3159 SRR1299125 caudal fin Half day time after treatment 68.1551 SRR038625 embryo traf6 morpholino 65.3074 SRR594769 blood normal 65.0499 SRR748489 egg normal 64.7224 SRR519737 2 dpf VD3 treatment 62.8969 SRR1291417 5 dpi injected marinum 62.3172 SRR1299129 caudal fin Seven days time after treatment 61.2741 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 61.1053 SRR1648856 brain normal 60.2979 SRR1104059 heart kctd10 mut 60.0813 SRR594771 endothelium normal 59.8461 SRR527840 24hpf normal 59.4641 SRR1005530 embryo RPL11 morpholino 59.0226 SRR1299128 caudal fin Three days time after treatment 58.6428 SRR1104058 heart normal 58.5221 SRR1569495 embryo normal 58.5153 SRR891495 heart normal 57.4019 SRR801556 embryo RPS19 and p53 morpholino 57.1399 SRR516121 skin male and 3.5 year 56.9537 SRR516122 skin male and 3.5 year 56.8503 SRR516123 skin male and 3.5 year 56.6886 SRR372800 2 dpf normal 56.3362 SRR1299127 caudal fin Two days time after treatment 55.9731 SRR941753 posterior pectoral fin normal 55.8687 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 55.513000000000005 SRR372787 2-4 cell normal 55.0183 SRR1205154 5dpf transgenic sqET20 54.9691 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 54.388000000000005 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 53.3082 SRR372798 28 hpf normal 53.0697 SRR748491 germ ring normal 53.0101 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 52.82899999999999 SRR038624 embryo traf6 morpholino and bacterial infection 52.7464 SRR941749 anterior pectoral fin normal 52.4568 ERR594416 retina transgenic flk1 52.0649 SRR1035981 13 hpf rx3+/+ or rx3+/- 52.0426 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 51.6407 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 51.2115 SRR535978 larvae normal 50.4063 SRR1708343 embryo MUTAS 49.263000000000005 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 49.0463 SRR801555 embryo RPS19 morpholino 48.7904 SRR038627 embryo control morpholino 48.4943 SRR1035237 liver transgenic UHRF1 48.4175 SRR519752 7 dpf VD3 treatment 47.8794 SRR1291414 5 dpi normal 47.7576 SRR776507 embryo normal 47.693000000000005 SRR630463 5 dpf normal 47.1605 SRR1648854 brain normal 46.7639 SRR519732 7 dpf FETOH treatment 46.018 SRR065196 3 dpf normal 45.9436 SRR535890 larvae normal 45.9075 SRR1647682 spleen normal 45.6752 SRR1035978 13 hpf rx3-/- 45.14 SRR1205160 5dpf transgenic sqET20 and GFP+ 44.8414 SRR1523211 embryo control morpholino 44.2989 SRR1708345 embryo SIBAS 44.1872 SRR535986 larvae nhsl1b mut 44.1648 SRR630464 5 dpf injected epidermidis 44.0907 SRR1523214 embryo glut12 morpholino 43.457 ERR594418 retina transgenic flk1 and develop tumors 43.3891 ERR594417 retina normal 43.0529 SRR776508 embryo miR-146 knockdown 42.0662 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 41.9617 SRR1647683 spleen SVCV treatment 41.4796 SRR658545 6 somite Gata6 morphant 41.0494 SRR1004786 larvae control morpholino 41.0084 SRR535913 larvae krox mut 40.4258 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 39.751999999999995 SRR1647684 spleen SVCV treatment 39.0624 SRR516131 skin male and 5 month 38.7519 SRR519747 6 dpf VD3 treatment 38.2824 SRR516125 skin male and 3.5 year 38.134 SRR1565813 brain normal 37.2943 SRR1004785 larvae normal 37.1692 SRR1647680 head kidney SVCV treatment 37.1568 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 36.934 SRR1004789 larvae impdh2 morpholino 36.8368 SRR1005529 embryo control morpholino 36.6566 SRR801554 embryo control morpholino 36.6014 SRR1188160 embryo Insulin 4 hpi 36.2245 SRR1188148 embryo Control PBS 0.5 hpi 36.1924 SRR535943 larvae vangl mut 35.98 SRR1647679 head kidney normal 35.7594 SRR700534 heart control morpholino 35.5924 SRR592700 pineal gland normal 35.4868 SRR1004788 larvae impdh1b morpholino 35.1653 SRR1648855 brain normal 35.0666 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 35.0334 SRR065197 3 dpf U1C knockout 34.8674 SRR519727 6 dpf FETOH treatment 34.8538 SRR1565815 brain normal 34.6543 SRR1562528 eye normal 34.2708 SRR776509 embryo Salmonella infected 33.747 SRR1188152 embryo Insulin 0.5 hpi 33.6649 SRR1342216 embryo norml 33.429 SRR700537 heart Gata4 morpholino 33.0783 SRR535926 larvae normal 32.9884 SRR776510 embryo Salmonella infected and miR-146 knockdown 32.9845 SRR942764 embryo myd88-/- 32.9105 SRR658543 6 somite Gata5 morphan 32.5267 SRR942769 embryo myd88+/+ 32.3821 SRR1562531 muscle normal 32.2307 SRR658547 6 somite Gata5/6 morphant 32.187 SRR516124 skin male and 3.5 year 32.1644 SRR516132 skin male and 5 month 32.1554 SRR1004787 larvae impdh1a morpholino 32.1479 SRR1167753 embryo bacterial infection 32.0995 SRR516133 skin male and 5 month 32.0445 SRR1565805 brain normal 31.8896 SRR592702 pineal gland normal 31.8722 SRR519742 4 dpf VD3 treatment 31.6576 SRR1565809 brain normal 31.5733 SRR658535 bud Gata5 morphant 31.5647 SRR1167756 embryo mpeg1 morpholino 31.3324 SRR519722 4 dpf FETOH treatment 31.324 SRR1167763 embryo ptpn6 morpholino and bacterial infection 31.3052 SRR658533 bud normal 31.2783 SRR1167752 embryo normal 31.2333 SRR748488 sperm normal 31.1567 SRR891511 brain normal 31.1486 SRR527832 16-36 hpf normal 31.0659 SRR516134 skin male and 5 month 31.0476 SRR726542 5 dpf infection with control 30.9349 SRR516128 skin male and 5 month 30.8618 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 30.8378 SRR1565807 brain normal 30.5848 SRR592701 pineal gland normal 30.2969 SRR726540 5 dpf normal 30.0872 SRR1167757 embryo mpeg1 morpholino and bacterial infection 29.7289 SRR726541 5 dpf infection with Mycobacterium marinum 29.7153 SRR1647681 head kidney SVCV treatment 28.8304 SRR891510 muscle normal 28.4445 SRR1565811 brain normal 28.4162 SRR1188156 embryo Control PBS 4 hpi 28.3798 SRR372789 1K cell normal 28.3615 SRR1565817 brain normal 28.3284 SRR831692 embryo normal 27.9579 SRR1534349 larvae DMSO vehicle 27.5562 SRR527834 head normal 27.5075 SRR1035984 13 hpf normal 26.643 SRR527833 5 dpf normal 26.5539 SRR516127 skin male and 5 month 26.4508 SRR592703 pineal gland normal 26.3018 SRR592699 pineal gland normal 26.1778 SRR1708346 embryo SIBPS 25.5667 SRR891512 blood normal 25.4144 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 25.3373 SRR610741 3 dpf express Ras 25.1919 SRR1048061 pineal gland dark 25.1873 SRR516129 skin male and 5 month 25.1474 SRR535850 larvae hoxb1b mut 25.1045 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 24.9793 SRR1708344 embryo MUTPS 24.9014 SRR1565819 brain normal 24.3313 SRR1342218 embryo marco morpholino 23.7116 SRR610740 3 dpf normal 23.1463 SRR749515 24 hpf eif3ha morphant 23.0767 SRR633550 larvae exposed to hypoxia stress 22.9662 SRR516135 skin male and 5 month 22.4989 SRR1562529 intestine and pancreas normal 22.3377 SRR535849 larvae normal 22.1249 SRR1534351 larvae 500 ug/l BDE47 treatment 21.7465 SRR610742 3 dpf express NICD 21.7279 SRR891504 liver normal 21.5858 SRR1534350 larvae 5 ug/l BDE47 treatment 21.3682 SRR1035239 liver transgenic mCherry control 21.3571 SRR658541 6 somite normal 21.3506 SRR748490 1 kcell normal 21.3409 SRR1342217 embryo infection with Mycobacterium marinum 21.3038 SRR516126 skin male and 5 month 21.2499 SRR886457 512 cell 4-thio-UTP metabolic labeling 21.0891 SRR527835 tail normal 21.0554 SRR535852 larvae hoxb1b mut 20.9858 SRR1167762 embryo ptpn6 morpholino 20.9607 SRR1028003 head normal 20.7271 SRR372802 5 dpf normal 20.6512 SRR1028004 head normal 19.8913 SRR535851 larvae normal 19.8878 SRR1562532 spleen normal 19.7672 SRR516130 skin male and 5 month 19.364 SRR633516 larvae normal 19.3404 SRR535848 larvae hoxb1b mut 18.8522 SRR1562533 testis normal 18.4518 SRR1039573 gastrointestinal diet 0.75 NPM 18.2961 SRR535847 larvae normal 17.964000000000002 SRR886456 256 cell 4-thio-UTP metabolic labeling 17.8929 SRR038626 embryo control morpholino and bacterial infection 17.8586 SRR1028002 head normal 17.7843 SRR749514 24 hpf normal 17.4828 ERR023144 brain normal 17.1619 SRR957180 heart 7 days after heart tip amputation 16.9556 SRR658539 bud Gata5/6 morphant 16.5855 SRR1039571 gastrointestinal diet 0.1 NPM 16.2893 SRR633544 larvae exposed to cold stress 15.8905 ERR023145 heart normal 15.7662 SRR1048059 pineal gland light 15.6426 SRR957181 heart normal 14.6446 SRR592698 pineal gland normal 14.4711 SRR886455 128 cell 4-thio-UTP metabolic labeling 13.3105 SRR1562530 liver normal 12.6221 SRR1049814 256 cell normal 11.0565 SRR1621206 embryo normal 10.4323 SRR800037 egg normal 9.061010000000001 SRR800043 sphere stage normal 8.45191 ERR023146 head kidney normal 4.713019999999999 ERR023143 swim bladder normal 4.660159999999999 SRR800049 sphere stage control treatment 2.57412 SRR800046 sphere stage 5azaCyD treatment 2.49612 SRR800045 muscle normal 1.7502