sample tissue condition fpkm SRR535978 larvae normal 11.7594 SRR535986 larvae nhsl1b mut 10.2011 SRR1004787 larvae impdh1a morpholino 8.53285 SRR535890 larvae normal 5.80399 SRR1004786 larvae control morpholino 4.58664 SRR535943 larvae vangl mut 4.162640000000001 SRR535926 larvae normal 4.1437 SRR535913 larvae krox mut 3.49203 SRR535851 larvae normal 3.3696900000000003 SRR535848 larvae hoxb1b mut 2.9895 SRR065197 3 dpf U1C knockout 2.8155200000000002 SRR726542 5 dpf infection with control 2.60989 SRR1005530 embryo RPL11 morpholino 2.46313 SRR726541 5 dpf infection with Mycobacterium marinum 2.03009 SRR1708346 embryo SIBPS 2.01143 SRR535852 larvae hoxb1b mut 2.0013900000000002 SRR038626 embryo control morpholino and bacterial infection 1.7127 SRR1708343 embryo MUTAS 1.50765 SRR610741 3 dpf express Ras 1.49184 SRR535849 larvae normal 1.4794 SRR1104058 heart normal 1.38635 SRR038627 embryo control morpholino 1.38381 SRR516134 skin male and 5 month 1.26931 SRR831692 embryo normal 1.16659 SRR065196 3 dpf normal 1.14466 SRR1708344 embryo MUTPS 1.13465 SRR535850 larvae hoxb1b mut 1.0637 SRR1004788 larvae impdh1b morpholino 1.00727 SRR372798 28 hpf normal 0.8148310000000001 SRR1104059 heart kctd10 mut 0.77637 SRR726540 5 dpf normal 0.692871 SRR516124 skin male and 3.5 year 0.635268 SRR372793 shield normal 0.6092930000000001 SRR891512 blood normal 0.58895 SRR516128 skin male and 5 month 0.588568 SRR1005529 embryo control morpholino 0.574596 SRR1035984 13 hpf normal 0.574465 SRR801554 embryo control morpholino 0.5730850000000001 SRR891511 brain normal 0.564808 SRR514030 retina id2a morpholino 0.562246 SRR1035237 liver transgenic UHRF1 0.5453210000000001 SRR1708345 embryo SIBAS 0.515518 SRR1562533 testis normal 0.506102 SRR592700 pineal gland normal 0.48764799999999997 SRR891510 muscle normal 0.44730600000000004 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.44586800000000004 SRR1004785 larvae normal 0.43148500000000006 SRR1004789 larvae impdh2 morpholino 0.43016499999999996 SRR516123 skin male and 3.5 year 0.42527 SRR1523211 embryo control morpholino 0.41535 SRR891504 liver normal 0.40489200000000003 SRR516133 skin male and 5 month 0.402632 SRR372791 dome normal 0.387841 SRR1035978 13 hpf rx3-/- 0.38209099999999996 SRR1188148 embryo Control PBS 0.5 hpi 0.356806 SRR1299126 caudal fin One day time after treatment 0.353564 SRR800045 muscle normal 0.342025 SRR527834 head normal 0.340917 SRR776509 embryo Salmonella infected 0.338453 SRR372800 2 dpf normal 0.321891 SRR519717 2 dpf FETOH treatment 0.314452 SRR1291417 5 dpi injected marinum 0.30495900000000004 SRR633550 larvae exposed to hypoxia stress 0.303149 SRR592703 pineal gland normal 0.300736 SRR535847 larvae normal 0.282767 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.27318400000000004 SRR1167762 embryo ptpn6 morpholino 0.268883 SRR519737 2 dpf VD3 treatment 0.267204 SRR516130 skin male and 5 month 0.264447 SRR1188156 embryo Control PBS 4 hpi 0.25858200000000003 SRR776507 embryo normal 0.255619 SRR1562530 liver normal 0.237654 SRR516126 skin male and 5 month 0.231652 SRR519742 4 dpf VD3 treatment 0.22940500000000003 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.227529 SRR1569495 embryo normal 0.22123600000000002 SRR630463 5 dpf normal 0.219771 SRR658535 bud Gata5 morphant 0.214779 SRR1342218 embryo marco morpholino 0.21088200000000001 SRR1188160 embryo Insulin 4 hpi 0.18849000000000002 ERR594418 retina transgenic flk1 and develop tumors 0.182085 SRR1291414 5 dpi normal 0.18087999999999999 SRR519732 7 dpf FETOH treatment 0.175809 SRR1534349 larvae DMSO vehicle 0.17213299999999998 SRR1562529 intestine and pancreas normal 0.167319 SRR527833 5 dpf normal 0.16633900000000001 SRR372796 bud normal 0.162926 SRR1647680 head kidney SVCV treatment 0.15850799999999998 SRR519722 4 dpf FETOH treatment 0.155622 SRR1534351 larvae 500 ug/l BDE47 treatment 0.153999 SRR1167753 embryo bacterial infection 0.150068 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.149554 SRR1648855 brain normal 0.149224 SRR1299124 caudal fin Zero day time after treatment 0.14768 SRR1188152 embryo Insulin 0.5 hpi 0.14721199999999998 SRR1562532 spleen normal 0.14532899999999999 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.14366700000000002 SRR1342217 embryo infection with Mycobacterium marinum 0.14294 SRR514028 retina control morpholino 0.14039000000000001 SRR1562531 muscle normal 0.13827899999999999 SRR1648854 brain normal 0.134243 SRR519752 7 dpf VD3 treatment 0.12238299999999999 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.12225 SRR630464 5 dpf injected epidermidis 0.120071 SRR942764 embryo myd88-/- 0.11902 SRR797911 embryo prdm1-/- 0.11156700000000001 SRR1035239 liver transgenic mCherry control 0.111562 SRR519727 6 dpf FETOH treatment 0.107297 SRR594771 endothelium normal 0.102943 SRR801555 embryo RPS19 morpholino 0.102551 ERR594416 retina transgenic flk1 0.09293910000000001 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.09235089999999999 SRR957180 heart 7 days after heart tip amputation 0.0866177 SRR1565807 brain normal 0.085603 SRR658545 6 somite Gata6 morphant 0.07773250000000001 SRR1565805 brain normal 0.0730046 SRR1028002 head normal 0.0691429 SRR1028003 head normal 0.0687929 SRR633516 larvae normal 0.0630711 SRR372787 2-4 cell normal 0.062147100000000004 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.061519700000000004 SRR797908 embryo normal 0.060527599999999994 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.0603755 SRR519747 6 dpf VD3 treatment 0.0598457 SRR1565813 brain normal 0.059490699999999994 SRR527836 24hpf normal 0.059157299999999996 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.058369000000000004 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.057913900000000004 SRR516122 skin male and 3.5 year 0.05699590000000001 SRR1569491 embryo normal 0.0568303 SRR957181 heart normal 0.0562289 SRR658543 6 somite Gata5 morphan 0.0506981 ERR594417 retina normal 0.050296 SRR592699 pineal gland normal 0.044985699999999997 SRR1299128 caudal fin Three days time after treatment 0.0384808 SRR1167752 embryo normal 0.0345258 SRR1205154 5dpf transgenic sqET20 0.034281400000000004 SRR941753 posterior pectoral fin normal 0.0283012 SRR749515 24 hpf eif3ha morphant 0.0253614 SRR797914 embryo pbx2/4-MO 0.0250477 SRR700537 heart Gata4 morpholino 0.0243678 SRR1565811 brain normal 0.0238436 SRR1021213 sphere stage normal 0.0232968 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.0216533 SRR942769 embryo myd88+/+ 0.019106 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.0184824 SRR1021215 sphere stage Mzeomesa 0.0176577 SRR1648856 brain normal 0.0174067 ERR023144 brain normal 0.0168704 SRR1565809 brain normal 0.014767600000000002 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.0134739 SRR749514 24 hpf normal 0.013301400000000001 SRR748488 sperm normal 0.011840700000000001 SRR633544 larvae exposed to cold stress 0.00925609 SRR1562528 eye normal 0.0069051 SRR1534350 larvae 5 ug/l BDE47 treatment 0.00595339 SRR658539 bud Gata5/6 morphant 0.0023640999999999996 SRR1299129 caudal fin Seven days time after treatment 0.00136728 SRR592702 pineal gland normal 0.000648493 SRR527832 16-36 hpf normal 0.000551123 SRR1342216 embryo norml 0.000272716 SRR038624 embryo traf6 morpholino and bacterial infection 0.000145562 SRR516135 skin male and 5 month 0.00011719999999999999 SRR1647684 spleen SVCV treatment 8.18517e-05 SRR700534 heart control morpholino 7.52358e-05 SRR1167763 embryo ptpn6 morpholino and bacterial infection 5.96132e-05 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 3.7616999999999996e-05 SRR1299125 caudal fin Half day time after treatment 2.99258e-05 SRR1039573 gastrointestinal diet 0.75 NPM 1.72577e-05 SRR658541 6 somite normal 1.39965e-05 SRR1647682 spleen normal 1.24778e-05 SRR658533 bud normal 9.194989999999999e-06 SRR658537 bud Gata6 morphant 5.98191e-06