sample tissue condition fpkm SRR1299125 caudal fin Half day time after treatment 71.8976 SRR1299127 caudal fin Two days time after treatment 67.6582 SRR1299126 caudal fin One day time after treatment 66.6722 SRR1299128 caudal fin Three days time after treatment 57.6188 SRR1299129 caudal fin Seven days time after treatment 57.3226 SRR514028 retina control morpholino 52.0696 SRR700534 heart control morpholino 44.1627 SRR1562529 intestine and pancreas normal 40.696999999999996 SRR1299124 caudal fin Zero day time after treatment 38.7815 SRR535978 larvae normal 37.4226 SRR1021213 sphere stage normal 35.6758 SRR516134 skin male and 5 month 35.4263 SRR516131 skin male and 5 month 35.148 SRR514030 retina id2a morpholino 33.7868 SRR1039571 gastrointestinal diet 0.1 NPM 33.5986 SRR700537 heart Gata4 morpholino 33.2539 SRR516126 skin male and 5 month 32.9662 SRR516127 skin male and 5 month 30.7021 SRR1035237 liver transgenic UHRF1 30.6438 SRR516133 skin male and 5 month 30.3861 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 29.6946 SRR1708346 embryo SIBPS 29.5442 SRR1708345 embryo SIBAS 29.5066 SRR527836 24hpf normal 28.4782 SRR516129 skin male and 5 month 28.4063 SRR516125 skin male and 3.5 year 28.3465 SRR516130 skin male and 5 month 28.2221 SRR1562533 testis normal 28.1059 SRR516123 skin male and 3.5 year 27.9195 SRR516128 skin male and 5 month 27.6684 SRR535986 larvae nhsl1b mut 27.2985 SRR516132 skin male and 5 month 26.983 SRR1039573 gastrointestinal diet 0.75 NPM 26.7633 SRR1647684 spleen SVCV treatment 26.008000000000003 SRR516122 skin male and 3.5 year 25.8353 SRR1021215 sphere stage Mzeomesa 25.7823 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 25.2856 SRR516121 skin male and 3.5 year 24.951 SRR516124 skin male and 3.5 year 24.3342 SRR594769 blood normal 24.0416 SRR1647683 spleen SVCV treatment 23.8015 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 22.2283 SRR776510 embryo Salmonella infected and miR-146 knockdown 22.0496 SRR527840 24hpf normal 21.7814 SRR1167763 embryo ptpn6 morpholino and bacterial infection 21.5283 SRR797908 embryo normal 21.4187 SRR1104059 heart kctd10 mut 21.2738 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 20.8358 SRR1708344 embryo MUTPS 20.8056 SRR1291417 5 dpi injected marinum 20.6922 SRR594771 endothelium normal 20.6319 SRR749515 24 hpf eif3ha morphant 20.1285 SRR797911 embryo prdm1-/- 20.055 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 19.8974 SRR1708343 embryo MUTAS 19.7072 SRR1562528 eye normal 19.6205 SRR1104058 heart normal 19.5616 SRR1647680 head kidney SVCV treatment 19.5443 SRR1205160 5dpf transgenic sqET20 and GFP+ 19.5335 SRR797914 embryo pbx2/4-MO 19.3228 SRR1562530 liver normal 19.2529 SRR776508 embryo miR-146 knockdown 18.9225 SRR1647682 spleen normal 18.5543 SRR516135 skin male and 5 month 18.4218 SRR748490 1 kcell normal 18.3973 SRR942769 embryo myd88+/+ 18.3004 SRR776507 embryo normal 18.08 SRR797917 embryo pbx2/4-MO and prdm1-/- 17.9899 SRR1167762 embryo ptpn6 morpholino 17.8499 SRR1562532 spleen normal 17.6948 ERR023144 brain normal 17.5271 SRR1167752 embryo normal 17.38 ERR023143 swim bladder normal 17.3102 SRR1647681 head kidney SVCV treatment 17.0684 SRR1167757 embryo mpeg1 morpholino and bacterial infection 16.8697 SRR1167753 embryo bacterial infection 16.685 SRR800037 egg normal 16.5118 SRR535926 larvae normal 16.5054 SRR1291414 5 dpi normal 16.2267 SRR1342217 embryo infection with Mycobacterium marinum 16.1483 SRR776509 embryo Salmonella infected 15.9072 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 15.7648 SRR630464 5 dpf injected epidermidis 15.7503 SRR749514 24 hpf normal 15.7128 ERR023146 head kidney normal 15.6947 SRR535943 larvae vangl mut 15.6331 SRR658545 6 somite Gata6 morphant 15.6207 SRR942764 embryo myd88-/- 15.4766 ERR594418 retina transgenic flk1 and develop tumors 15.1944 SRR1035239 liver transgenic mCherry control 15.0154 SRR535913 larvae krox mut 14.6878 SRR886457 512 cell 4-thio-UTP metabolic labeling 14.6154 SRR658541 6 somite normal 14.4879 SRR1523211 embryo control morpholino 14.4072 SRR1342218 embryo marco morpholino 14.4017 SRR038627 embryo control morpholino 14.3766 SRR941749 anterior pectoral fin normal 14.2243 SRR630463 5 dpf normal 14.2133 SRR1647679 head kidney normal 14.1208 SRR610740 3 dpf normal 14.052999999999999 SRR1167756 embryo mpeg1 morpholino 13.7898 SRR1342216 embryo norml 13.7785 SRR1523214 embryo glut12 morpholino 13.7297 SRR891512 blood normal 13.6483 ERR594417 retina normal 13.4935 SRR658547 6 somite Gata5/6 morphant 13.4907 SRR1035981 13 hpf rx3+/+ or rx3+/- 13.0372 SRR1569491 embryo normal 12.9936 SRR1188152 embryo Insulin 0.5 hpi 12.987 SRR1188156 embryo Control PBS 4 hpi 12.974 SRR535890 larvae normal 12.9458 SRR1035978 13 hpf rx3-/- 12.9406 SRR065197 3 dpf U1C knockout 12.850999999999999 SRR610742 3 dpf express NICD 12.6101 SRR633544 larvae exposed to cold stress 12.4842 SRR658543 6 somite Gata5 morphan 12.4404 ERR594416 retina transgenic flk1 12.3923 SRR831692 embryo normal 12.366 SRR610741 3 dpf express Ras 12.1297 SRR519717 2 dpf FETOH treatment 12.0519 SRR535848 larvae hoxb1b mut 11.9941 SRR519742 4 dpf VD3 treatment 11.6857 SRR519737 2 dpf VD3 treatment 11.6259 SRR527844 24hpf normal 11.5006 SRR038626 embryo control morpholino and bacterial infection 11.378 SRR527834 head normal 11.3348 SRR519722 4 dpf FETOH treatment 11.0946 SRR800043 sphere stage normal 10.8811 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 10.8301 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 10.8191 SRR726540 5 dpf normal 10.7394 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 10.7078 SRR941753 posterior pectoral fin normal 10.6849 SRR1565811 brain normal 10.5724 SRR886455 128 cell 4-thio-UTP metabolic labeling 10.4889 SRR065196 3 dpf normal 10.4838 SRR1565809 brain normal 10.4669 SRR535849 larvae normal 10.3907 SRR535852 larvae hoxb1b mut 10.3731 SRR527835 tail normal 10.0409 SRR1565817 brain normal 10.0015 SRR535851 larvae normal 9.99665 SRR726542 5 dpf infection with control 9.98043 SRR1188160 embryo Insulin 4 hpi 9.95765 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 9.910730000000001 SRR535847 larvae normal 9.864410000000001 SRR1565819 brain normal 9.78732 SRR527833 5 dpf normal 9.6892 SRR038625 embryo traf6 morpholino 9.60406 SRR1565807 brain normal 9.5086 SRR1562531 muscle normal 9.50234 SRR748488 sperm normal 9.39212 SRR1188148 embryo Control PBS 0.5 hpi 9.38124 SRR527832 16-36 hpf normal 9.30092 SRR1565805 brain normal 9.21562 SRR1565813 brain normal 9.19389 SRR519752 7 dpf VD3 treatment 9.115210000000001 SRR658533 bud normal 9.11229 SRR535850 larvae hoxb1b mut 9.075619999999999 SRR1565815 brain normal 9.05804 SRR658537 bud Gata6 morphant 9.01915 SRR1534351 larvae 500 ug/l BDE47 treatment 8.95859 SRR886456 256 cell 4-thio-UTP metabolic labeling 8.90139 SRR1205154 5dpf transgenic sqET20 8.74409 SRR038624 embryo traf6 morpholino and bacterial infection 8.726 SRR1035984 13 hpf normal 8.67797 SRR800046 sphere stage 5azaCyD treatment 8.589369999999999 SRR800049 sphere stage control treatment 8.40595 SRR891510 muscle normal 8.320689999999999 SRR633550 larvae exposed to hypoxia stress 8.17512 SRR519727 6 dpf FETOH treatment 8.02941 SRR726541 5 dpf infection with Mycobacterium marinum 8.01286 SRR592698 pineal gland normal 7.942010000000001 SRR1028003 head normal 7.8578 SRR519747 6 dpf VD3 treatment 7.739669999999999 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 7.73901 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 7.645239999999999 SRR1569495 embryo normal 7.42393 SRR1048059 pineal gland light 7.395230000000001 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 7.33908 SRR592703 pineal gland normal 7.066039999999999 SRR633516 larvae normal 7.0166699999999995 SRR592699 pineal gland normal 6.95505 SRR658539 bud Gata5/6 morphant 6.91286 SRR1534349 larvae DMSO vehicle 6.646139999999999 SRR1534350 larvae 5 ug/l BDE47 treatment 6.621919999999999 SRR1028004 head normal 6.5535 SRR1028002 head normal 6.52924 SRR1004788 larvae impdh1b morpholino 6.43206 SRR1004786 larvae control morpholino 6.32068 SRR658535 bud Gata5 morphant 6.2266900000000005 SRR891504 liver normal 6.13955 SRR519732 7 dpf FETOH treatment 6.10891 SRR891495 heart normal 6.05599 SRR592700 pineal gland normal 5.94259 SRR891511 brain normal 5.91405 SRR592702 pineal gland normal 5.59101 ERR023145 heart normal 5.47452 SRR1004785 larvae normal 5.46738 SRR592701 pineal gland normal 5.41096 SRR1048061 pineal gland dark 5.32406 SRR748491 germ ring normal 5.2557 SRR1004787 larvae impdh1a morpholino 4.70937 SRR748489 egg normal 4.59754 SRR1005529 embryo control morpholino 4.4762900000000005 SRR801554 embryo control morpholino 4.4695599999999995 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 4.01545 SRR1005530 embryo RPL11 morpholino 3.65115 SRR1004789 larvae impdh2 morpholino 3.5274699999999997 SRR801556 embryo RPS19 and p53 morpholino 3.20223 SRR801555 embryo RPS19 morpholino 2.43939 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.05153 SRR800045 muscle normal 0.95842 SRR372802 5 dpf normal 0.451488 SRR1648856 brain normal 0.289454 SRR1648855 brain normal 0.26918800000000004 SRR1648854 brain normal 0.0915387 SRR372800 2 dpf normal 0.045207300000000006 SRR372798 28 hpf normal 0.013672799999999999 SRR372791 dome normal 0.0105475