sample tissue condition fpkm SRR1299125 caudal fin Half day time after treatment 67.1952 SRR1299126 caudal fin One day time after treatment 51.7645 SRR1299124 caudal fin Zero day time after treatment 50.1692 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 49.6764 SRR1299129 caudal fin Seven days time after treatment 47.4154 SRR516130 skin male and 5 month 43.285 SRR516128 skin male and 5 month 38.7405 SRR1569491 embryo normal 37.2108 SRR594771 endothelium normal 33.9479 SRR516129 skin male and 5 month 33.3804 SRR516127 skin male and 5 month 31.713 ERR023144 brain normal 30.4314 SRR1299127 caudal fin Two days time after treatment 30.3876 SRR527834 head normal 29.9363 SRR1565813 brain normal 27.2718 SRR941749 anterior pectoral fin normal 27.1997 SRR1565809 brain normal 27.0618 SRR1565811 brain normal 27.0449 SRR891511 brain normal 26.9858 SRR1565805 brain normal 26.3042 SRR1299128 caudal fin Three days time after treatment 26.2686 SRR516134 skin male and 5 month 25.1306 SRR1565807 brain normal 25.0474 SRR1565819 brain normal 24.9865 SRR1565817 brain normal 24.4775 SRR1565815 brain normal 23.5246 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 23.4133 SRR594769 blood normal 23.0866 SRR891510 muscle normal 22.8301 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 22.1555 SRR1048059 pineal gland light 21.5752 SRR1291417 5 dpi injected marinum 20.5606 SRR1039571 gastrointestinal diet 0.1 NPM 20.4658 SRR516122 skin male and 3.5 year 20.3797 SRR516131 skin male and 5 month 19.9397 SRR630464 5 dpf injected epidermidis 19.3529 SRR519732 7 dpf FETOH treatment 19.2349 SRR519727 6 dpf FETOH treatment 18.6689 SRR516125 skin male and 3.5 year 18.3104 SRR941753 posterior pectoral fin normal 18.1508 SRR519752 7 dpf VD3 treatment 17.9773 SRR1647683 spleen SVCV treatment 17.5554 SRR1104058 heart normal 17.0888 SRR519747 6 dpf VD3 treatment 17.067 SRR1039573 gastrointestinal diet 0.75 NPM 17.0093 SRR1534351 larvae 500 ug/l BDE47 treatment 16.9901 ERR023143 swim bladder normal 16.9092 SRR516121 skin male and 3.5 year 16.8928 SRR1569495 embryo normal 16.8141 SRR1188148 embryo Control PBS 0.5 hpi 16.6854 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 16.6844 SRR516135 skin male and 5 month 16.6517 SRR516126 skin male and 5 month 16.6171 SRR516124 skin male and 3.5 year 16.5522 SRR516133 skin male and 5 month 16.5496 SRR700534 heart control morpholino 16.442999999999998 SRR1562528 eye normal 15.8765 SRR1167763 embryo ptpn6 morpholino and bacterial infection 15.8141 SRR1291414 5 dpi normal 15.7284 SRR1562532 spleen normal 15.4382 SRR516123 skin male and 3.5 year 14.9685 SRR1562531 muscle normal 14.7145 ERR023145 heart normal 14.0799 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 13.8978 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 13.5502 SRR891512 blood normal 13.392999999999999 SRR700537 heart Gata4 morpholino 12.8006 SRR516132 skin male and 5 month 12.6215 SRR726542 5 dpf infection with control 12.3529 SRR726540 5 dpf normal 12.2144 SRR1562529 intestine and pancreas normal 11.9149 SRR514028 retina control morpholino 11.8691 SRR630463 5 dpf normal 11.8448 SRR891495 heart normal 11.8429 ERR594418 retina transgenic flk1 and develop tumors 11.8011 SRR1167753 embryo bacterial infection 11.6656 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 11.3985 SRR1647684 spleen SVCV treatment 11.3129 SRR1167762 embryo ptpn6 morpholino 10.934000000000001 SRR1205160 5dpf transgenic sqET20 and GFP+ 10.7621 ERR594416 retina transgenic flk1 10.7593 SRR527833 5 dpf normal 10.738 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 10.5257 SRR800045 muscle normal 10.4535 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 10.3029 SRR519722 4 dpf FETOH treatment 10.2633 SRR942769 embryo myd88+/+ 10.1528 SRR1035237 liver transgenic UHRF1 10.1484 SRR1647682 spleen normal 9.99958 SRR1523211 embryo control morpholino 9.69295 SRR519742 4 dpf VD3 treatment 9.48105 SRR1342218 embryo marco morpholino 9.288689999999999 SRR1342217 embryo infection with Mycobacterium marinum 9.19236 SRR942764 embryo myd88-/- 9.119660000000001 SRR1188152 embryo Insulin 0.5 hpi 9.10037 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 8.88766 SRR1167752 embryo normal 8.827169999999999 SRR1534349 larvae DMSO vehicle 8.79826 SRR592700 pineal gland normal 8.78956 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 8.7594 SRR519717 2 dpf FETOH treatment 8.66858 SRR1647680 head kidney SVCV treatment 8.48119 SRR1188156 embryo Control PBS 4 hpi 8.45618 SRR1167756 embryo mpeg1 morpholino 8.39012 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 8.34832 ERR023146 head kidney normal 8.11824 SRR1534350 larvae 5 ug/l BDE47 treatment 8.05705 SRR1342216 embryo norml 7.849130000000001 SRR633550 larvae exposed to hypoxia stress 7.8403 SRR633516 larvae normal 7.82015 SRR592703 pineal gland normal 7.81147 SRR535986 larvae nhsl1b mut 7.7957399999999994 SRR535978 larvae normal 7.7933 SRR726541 5 dpf infection with Mycobacterium marinum 7.443280000000001 SRR1167757 embryo mpeg1 morpholino and bacterial infection 7.38121 SRR831692 embryo normal 7.38108 SRR514030 retina id2a morpholino 7.346010000000001 SRR519737 2 dpf VD3 treatment 7.24685 SRR065197 3 dpf U1C knockout 7.218789999999999 SRR633544 larvae exposed to cold stress 7.21789 SRR535850 larvae hoxb1b mut 6.83892 SRR1035239 liver transgenic mCherry control 6.8087 SRR1048061 pineal gland dark 6.664969999999999 SRR527836 24hpf normal 6.662560000000001 ERR594417 retina normal 6.43942 SRR535848 larvae hoxb1b mut 6.4152 SRR1523214 embryo glut12 morpholino 6.363569999999999 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 6.32129 SRR535852 larvae hoxb1b mut 6.01649 SRR1028004 head normal 5.99256 SRR065196 3 dpf normal 5.93239 SRR1562533 testis normal 5.86517 SRR527835 tail normal 5.8371699999999995 SRR535847 larvae normal 5.7893099999999995 SRR592702 pineal gland normal 5.765969999999999 SRR1188160 embryo Insulin 4 hpi 5.6425 SRR535849 larvae normal 5.63031 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 5.58319 SRR1028002 head normal 5.567769999999999 SRR610741 3 dpf express Ras 5.10548 SRR038626 embryo control morpholino and bacterial infection 5.09957 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.09842 SRR610742 3 dpf express NICD 5.05567 SRR1205154 5dpf transgenic sqET20 4.5742400000000005 SRR592701 pineal gland normal 4.56268 SRR610740 3 dpf normal 4.52199 SRR1104059 heart kctd10 mut 4.46116 SRR1028003 head normal 4.43112 SRR535851 larvae normal 4.2087900000000005 SRR038627 embryo control morpholino 4.20656 SRR535890 larvae normal 3.88714 SRR1647681 head kidney SVCV treatment 3.8239199999999998 SRR797917 embryo pbx2/4-MO and prdm1-/- 3.78199 SRR527840 24hpf normal 3.7643400000000002 SRR797911 embryo prdm1-/- 3.62393 SRR1708343 embryo MUTAS 3.61821 SRR797914 embryo pbx2/4-MO 3.57274 SRR592699 pineal gland normal 3.46483 SRR527832 16-36 hpf normal 3.38764 SRR797908 embryo normal 3.3680199999999996 SRR1708344 embryo MUTPS 3.12282 SRR1004787 larvae impdh1a morpholino 3.11462 SRR535943 larvae vangl mut 3.0989999999999998 SRR527844 24hpf normal 3.04359 SRR776510 embryo Salmonella infected and miR-146 knockdown 3.0213099999999997 SRR1647679 head kidney normal 2.91499 SRR1005529 embryo control morpholino 2.89761 SRR801554 embryo control morpholino 2.89289 SRR1562530 liver normal 2.8430400000000002 SRR1708346 embryo SIBPS 2.81617 SRR038624 embryo traf6 morpholino and bacterial infection 2.77037 SRR535913 larvae krox mut 2.59448 SRR801556 embryo RPS19 and p53 morpholino 2.49439 SRR038625 embryo traf6 morpholino 2.45695 SRR1708345 embryo SIBAS 2.42349 SRR592698 pineal gland normal 2.38578 SRR776507 embryo normal 2.3547700000000003 SRR749514 24 hpf normal 2.25552 SRR535926 larvae normal 2.1904 SRR776508 embryo miR-146 knockdown 2.18038 SRR1004788 larvae impdh1b morpholino 2.17436 SRR658543 6 somite Gata5 morphan 2.10835 SRR658547 6 somite Gata5/6 morphant 2.08135 SRR749515 24 hpf eif3ha morphant 2.06638 SRR891504 liver normal 1.95055 SRR1004785 larvae normal 1.9092200000000001 SRR748489 egg normal 1.89812 SRR658541 6 somite normal 1.79709 SRR776509 embryo Salmonella infected 1.79138 SRR1035978 13 hpf rx3-/- 1.73187 SRR1021213 sphere stage normal 1.6119999999999999 SRR1004786 larvae control morpholino 1.58261 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.36389 SRR748488 sperm normal 1.34962 SRR801555 embryo RPS19 morpholino 1.3386 SRR658535 bud Gata5 morphant 1.32582 SRR1005530 embryo RPL11 morpholino 1.3041 SRR658545 6 somite Gata6 morphant 1.29415 SRR1021215 sphere stage Mzeomesa 1.24511 SRR658533 bud normal 1.23953 SRR1004789 larvae impdh2 morpholino 1.18959 SRR800049 sphere stage control treatment 1.14824 SRR800046 sphere stage 5azaCyD treatment 1.09772 SRR800037 egg normal 1.0660399999999999 SRR658539 bud Gata5/6 morphant 0.9775159999999999 SRR1035984 13 hpf normal 0.9228219999999999 SRR658537 bud Gata6 morphant 0.8348049999999999 SRR800043 sphere stage normal 0.821441 SRR748491 germ ring normal 0.650046 SRR748490 1 kcell normal 0.6133649999999999 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.580978 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.284477 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.262142 SRR1648854 brain normal 0.0258474 SRR372796 bud normal 0.0211668 SRR372802 5 dpf normal 0.0031155