sample tissue condition fpkm SRR514030 retina id2a morpholino 49.1971 SRR594771 endothelium normal 37.4152 SRR1035981 13 hpf rx3+/+ or rx3+/- 36.1307 SRR514028 retina control morpholino 34.2763 SRR658543 6 somite Gata5 morphan 32.375 SRR658541 6 somite normal 31.7852 SRR749514 24 hpf normal 30.7996 SRR658533 bud normal 30.7028 SRR658535 bud Gata5 morphant 30.6121 SRR1035978 13 hpf rx3-/- 28.9528 SRR800045 muscle normal 26.7071 SRR658547 6 somite Gata5/6 morphant 23.0018 SRR658539 bud Gata5/6 morphant 22.8341 SRR594769 blood normal 22.3634 SRR749515 24 hpf eif3ha morphant 22.164 SRR658545 6 somite Gata6 morphant 20.503 SRR797911 embryo prdm1-/- 20.3665 SRR658537 bud Gata6 morphant 18.8967 SRR797914 embryo pbx2/4-MO 17.8676 SRR1035984 13 hpf normal 17.1018 SRR1569495 embryo normal 16.8582 SRR797908 embryo normal 15.6978 SRR800043 sphere stage normal 14.6828 SRR800046 sphere stage 5azaCyD treatment 13.7176 SRR800049 sphere stage control treatment 12.8814 SRR797917 embryo pbx2/4-MO and prdm1-/- 12.6537 SRR535890 larvae normal 12.1578 SRR516129 skin male and 5 month 11.0215 SRR535926 larvae normal 10.8341 SRR700537 heart Gata4 morpholino 10.7536 SRR535913 larvae krox mut 10.5964 SRR372796 bud normal 10.579 SRR516135 skin male and 5 month 9.94622 SRR516121 skin male and 3.5 year 8.95266 SRR535943 larvae vangl mut 8.57211 SRR1021215 sphere stage Mzeomesa 8.48761 SRR1205154 5dpf transgenic sqET20 8.360389999999999 SRR516124 skin male and 3.5 year 7.978219999999999 SRR1708343 embryo MUTAS 7.79997 SRR1104059 heart kctd10 mut 7.67948 SRR726540 5 dpf normal 7.591710000000001 SRR065197 3 dpf U1C knockout 7.5658199999999995 SRR372793 shield normal 7.483039999999999 SRR038625 embryo traf6 morpholino 7.45396 SRR516133 skin male and 5 month 7.218369999999999 SRR941749 anterior pectoral fin normal 7.166110000000001 SRR700534 heart control morpholino 7.06537 SRR1104058 heart normal 7.0541100000000005 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 7.03423 SRR372791 dome normal 6.78463 SRR516134 skin male and 5 month 6.7124 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 6.60959 SRR1205160 5dpf transgenic sqET20 and GFP+ 5.82178 SRR891504 liver normal 5.68806 SRR038626 embryo control morpholino and bacterial infection 5.64113 SRR633516 larvae normal 5.63705 SRR038627 embryo control morpholino 5.48137 SRR633544 larvae exposed to cold stress 5.4278699999999995 SRR1004789 larvae impdh2 morpholino 5.378369999999999 SRR1049814 256 cell normal 5.354019999999999 SRR065196 3 dpf normal 5.26774 SRR1004786 larvae control morpholino 5.26279 SRR516122 skin male and 3.5 year 5.23599 SRR516128 skin male and 5 month 5.21399 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 5.07085 SRR633550 larvae exposed to hypoxia stress 5.0439300000000005 SRR372787 2-4 cell normal 4.9748 SRR592699 pineal gland normal 4.96283 SRR516127 skin male and 5 month 4.89944 SRR519737 2 dpf VD3 treatment 4.83595 SRR726541 5 dpf infection with Mycobacterium marinum 4.83221 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 4.79706 SRR527832 16-36 hpf normal 4.78923 SRR519717 2 dpf FETOH treatment 4.78878 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 4.75584 SRR1621206 embryo normal 4.72288 SRR1708345 embryo SIBAS 4.6089400000000005 SRR516123 skin male and 3.5 year 4.58217 SRR748491 germ ring normal 4.55328 SRR800037 egg normal 4.4325 SRR516126 skin male and 5 month 4.38253 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 4.31233 SRR1021213 sphere stage normal 4.12416 SRR1004787 larvae impdh1a morpholino 4.09352 SRR831692 embryo normal 4.05044 SRR941753 posterior pectoral fin normal 4.01026 SRR726542 5 dpf infection with control 3.99926 SRR1708344 embryo MUTPS 3.96965 SRR592702 pineal gland normal 3.8805199999999997 SRR1048059 pineal gland light 3.85031 SRR1562531 muscle normal 3.7883 ERR594417 retina normal 3.7564800000000003 SRR535847 larvae normal 3.7397099999999996 SRR527833 5 dpf normal 3.6255699999999997 SRR1647684 spleen SVCV treatment 3.60411 SRR1004788 larvae impdh1b morpholino 3.5888 SRR535852 larvae hoxb1b mut 3.5478300000000003 SRR776510 embryo Salmonella infected and miR-146 knockdown 3.5321599999999997 SRR516125 skin male and 3.5 year 3.4622599999999997 SRR1004785 larvae normal 3.3777199999999996 SRR610740 3 dpf normal 3.29492 SRR1167756 embryo mpeg1 morpholino 3.2886699999999998 SRR372798 28 hpf normal 3.2072 SRR1647683 spleen SVCV treatment 3.13375 SRR372800 2 dpf normal 3.12411 SRR592703 pineal gland normal 3.0912 SRR1708346 embryo SIBPS 2.93229 SRR535850 larvae hoxb1b mut 2.9008599999999998 SRR519752 7 dpf VD3 treatment 2.88639 SRR1565819 brain normal 2.8827599999999998 SRR1648854 brain normal 2.7801400000000003 SRR519732 7 dpf FETOH treatment 2.76824 SRR535849 larvae normal 2.75052 SRR535848 larvae hoxb1b mut 2.71569 SRR592698 pineal gland normal 2.70968 SRR516130 skin male and 5 month 2.66698 ERR594418 retina transgenic flk1 and develop tumors 2.64715 SRR1005530 embryo RPL11 morpholino 2.64027 SRR748490 1 kcell normal 2.61259 SRR1188156 embryo Control PBS 4 hpi 2.60565 SRR519747 6 dpf VD3 treatment 2.59725 SRR038624 embryo traf6 morpholino and bacterial infection 2.5923599999999998 SRR519722 4 dpf FETOH treatment 2.57943 SRR592701 pineal gland normal 2.56521 SRR776508 embryo miR-146 knockdown 2.56091 SRR1048061 pineal gland dark 2.5381400000000003 SRR776509 embryo Salmonella infected 2.53571 SRR1647680 head kidney SVCV treatment 2.5293200000000002 SRR1647681 head kidney SVCV treatment 2.50015 SRR1534349 larvae DMSO vehicle 2.43995 SRR1523214 embryo glut12 morpholino 2.43451 SRR610742 3 dpf express NICD 2.40768 SRR519727 6 dpf FETOH treatment 2.3886 SRR1569491 embryo normal 2.29078 SRR372789 1K cell normal 2.2805400000000002 SRR886456 256 cell 4-thio-UTP metabolic labeling 2.2516599999999998 SRR1562530 liver normal 2.24743 SRR610741 3 dpf express Ras 2.21434 SRR1565815 brain normal 2.19485 SRR516131 skin male and 5 month 2.1170400000000003 SRR527834 head normal 2.11574 SRR1648855 brain normal 2.10154 SRR1562533 testis normal 2.02541 SRR748488 sperm normal 2.00368 SRR1035239 liver transgenic mCherry control 1.99642 SRR1565807 brain normal 1.98288 SRR801556 embryo RPS19 and p53 morpholino 1.9716 SRR372802 5 dpf normal 1.9521400000000002 SRR776507 embryo normal 1.9233799999999999 SRR1188148 embryo Control PBS 0.5 hpi 1.9121400000000002 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.85894 SRR535851 larvae normal 1.85231 SRR942764 embryo myd88-/- 1.84123 SRR1562532 spleen normal 1.83017 SRR1565817 brain normal 1.7973 SRR1647682 spleen normal 1.79575 ERR594416 retina transgenic flk1 1.79272 SRR527836 24hpf normal 1.77814 SRR1028004 head normal 1.77148 SRR1565805 brain normal 1.74663 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.73341 SRR886457 512 cell 4-thio-UTP metabolic labeling 1.7267099999999997 SRR1562528 eye normal 1.68651 SRR1647679 head kidney normal 1.671 SRR1565809 brain normal 1.66705 SRR1028003 head normal 1.6412099999999998 SRR527840 24hpf normal 1.6268799999999999 SRR519742 4 dpf VD3 treatment 1.5025 SRR1167753 embryo bacterial infection 1.49273 SRR527844 24hpf normal 1.49211 SRR1028002 head normal 1.48156 SRR1188152 embryo Insulin 0.5 hpi 1.42998 SRR1565811 brain normal 1.4202700000000001 SRR516132 skin male and 5 month 1.39846 SRR957180 heart 7 days after heart tip amputation 1.36784 SRR1562529 intestine and pancreas normal 1.30845 SRR1534351 larvae 500 ug/l BDE47 treatment 1.29178 SRR1565813 brain normal 1.25914 SRR535986 larvae nhsl1b mut 1.25909 SRR1534350 larvae 5 ug/l BDE47 treatment 1.2566700000000002 SRR957181 heart normal 1.24284 ERR023144 brain normal 1.1651200000000002 SRR1035237 liver transgenic UHRF1 1.14645 SRR1291417 5 dpi injected marinum 1.11043 SRR1005529 embryo control morpholino 1.06711 SRR801554 embryo control morpholino 1.0655 SRR1167762 embryo ptpn6 morpholino 0.9960469999999999 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.955933 SRR1188160 embryo Insulin 4 hpi 0.893492 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.8930379999999999 ERR023146 head kidney normal 0.856677 SRR1167752 embryo normal 0.841245 SRR891512 blood normal 0.84046 SRR1299125 caudal fin Half day time after treatment 0.818866 SRR1342218 embryo marco morpholino 0.816531 SRR1299129 caudal fin Seven days time after treatment 0.7288439999999999 SRR1299128 caudal fin Three days time after treatment 0.696285 SRR630464 5 dpf injected epidermidis 0.691053 SRR592700 pineal gland normal 0.6700619999999999 SRR527835 tail normal 0.627093 SRR630463 5 dpf normal 0.6196699999999999 SRR1039571 gastrointestinal diet 0.1 NPM 0.554737 SRR1342216 embryo norml 0.533295 SRR1342217 embryo infection with Mycobacterium marinum 0.5093840000000001 SRR1291414 5 dpi normal 0.507681 SRR1299126 caudal fin One day time after treatment 0.455938 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.44034399999999996 ERR023145 heart normal 0.42682200000000003 SRR801555 embryo RPS19 morpholino 0.4265 SRR535978 larvae normal 0.405558 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.383419 ERR023143 swim bladder normal 0.366385 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.35785 SRR1039573 gastrointestinal diet 0.75 NPM 0.30073 SRR1299127 caudal fin Two days time after treatment 0.29393 SRR1299124 caudal fin Zero day time after treatment 0.286936 SRR942769 embryo myd88+/+ 0.273903 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.217901 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.21347199999999997 SRR1523211 embryo control morpholino 0.205785 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.178598 SRR1648856 brain normal 0.146783