sample tissue condition fpkm SRR748491 germ ring normal 4.39973 SRR797911 embryo prdm1-/- 3.6281199999999996 SRR1708345 embryo SIBAS 3.32407 SRR1104058 heart normal 3.23644 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.18891 SRR797908 embryo normal 3.10426 SRR797914 embryo pbx2/4-MO 3.05876 SRR1021215 sphere stage Mzeomesa 3.0240299999999998 SRR1021213 sphere stage normal 3.01775 SRR1569495 embryo normal 2.87246 SRR1035978 13 hpf rx3-/- 2.8536599999999996 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.8387599999999997 SRR658535 bud Gata5 morphant 2.82515 SRR658541 6 somite normal 2.7793099999999997 SRR1708343 embryo MUTAS 2.7764900000000003 SRR1004788 larvae impdh1b morpholino 2.7714 SRR1104059 heart kctd10 mut 2.69446 SRR594771 endothelium normal 2.61583 SRR886456 256 cell 4-thio-UTP metabolic labeling 2.51343 SRR1562533 testis normal 2.50055 SRR658545 6 somite Gata6 morphant 2.44625 SRR776508 embryo miR-146 knockdown 2.3797099999999998 SRR658547 6 somite Gata5/6 morphant 2.29501 SRR535943 larvae vangl mut 2.22054 SRR658537 bud Gata6 morphant 2.19315 SRR658533 bud normal 2.1640200000000003 SRR514028 retina control morpholino 2.1586 SRR658543 6 somite Gata5 morphan 2.125 SRR038627 embryo control morpholino 2.0758900000000002 SRR1708344 embryo MUTPS 2.05448 SRR535913 larvae krox mut 2.04326 SRR1004786 larvae control morpholino 2.01016 SRR1004789 larvae impdh2 morpholino 2.00557 SRR514030 retina id2a morpholino 1.98312 SRR1004785 larvae normal 1.9729700000000001 SRR527844 24hpf normal 1.9397 SRR658539 bud Gata5/6 morphant 1.90694 SRR1569491 embryo normal 1.8550400000000002 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.8228799999999998 SRR776507 embryo normal 1.8081900000000002 SRR749514 24 hpf normal 1.79688 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.7821799999999999 SRR535926 larvae normal 1.77384 SRR535890 larvae normal 1.5871 SRR1708346 embryo SIBPS 1.58033 SRR527832 16-36 hpf normal 1.5519 SRR527836 24hpf normal 1.52916 SRR535986 larvae nhsl1b mut 1.52599 SRR038624 embryo traf6 morpholino and bacterial infection 1.41951 SRR1035984 13 hpf normal 1.41475 SRR1004787 larvae impdh1a morpholino 1.36385 SRR038625 embryo traf6 morpholino 1.3238 SRR749515 24 hpf eif3ha morphant 1.26693 SRR594769 blood normal 1.24302 SRR1205154 5dpf transgenic sqET20 1.23284 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.15534 SRR776509 embryo Salmonella infected 1.14519 SRR886457 512 cell 4-thio-UTP metabolic labeling 1.0953600000000001 SRR1565809 brain normal 1.0603 SRR1565811 brain normal 1.05273 SRR1028002 head normal 1.04629 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.00748 SRR1188148 embryo Control PBS 0.5 hpi 0.9787020000000001 SRR1188152 embryo Insulin 0.5 hpi 0.966477 SRR748488 sperm normal 0.955951 ERR023144 brain normal 0.933889 SRR527840 24hpf normal 0.922841 SRR831692 embryo normal 0.9124629999999999 SRR1299126 caudal fin One day time after treatment 0.884617 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.879769 SRR519737 2 dpf VD3 treatment 0.8697239999999999 SRR592698 pineal gland normal 0.864809 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.861974 SRR065196 3 dpf normal 0.8586159999999999 SRR726540 5 dpf normal 0.85819 ERR594418 retina transgenic flk1 and develop tumors 0.8537319999999999 SRR1523214 embryo glut12 morpholino 0.8506530000000001 SRR1167753 embryo bacterial infection 0.827672 SRR516134 skin male and 5 month 0.81685 SRR519717 2 dpf FETOH treatment 0.807934 SRR800046 sphere stage 5azaCyD treatment 0.7929579999999999 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.791301 SRR1647682 spleen normal 0.785996 SRR630463 5 dpf normal 0.785933 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.783723 SRR630464 5 dpf injected epidermidis 0.7803979999999999 SRR1188156 embryo Control PBS 4 hpi 0.746 SRR748490 1 kcell normal 0.739118 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.7283189999999999 SRR535848 larvae hoxb1b mut 0.7229720000000001 SRR038626 embryo control morpholino and bacterial infection 0.695034 SRR800049 sphere stage control treatment 0.6932729999999999 SRR1299128 caudal fin Three days time after treatment 0.6930649999999999 SRR700537 heart Gata4 morpholino 0.680887 SRR1167752 embryo normal 0.6799350000000001 SRR1039571 gastrointestinal diet 0.1 NPM 0.6471520000000001 SRR1028004 head normal 0.638813 SRR941753 posterior pectoral fin normal 0.623891 SRR1565813 brain normal 0.612003 SRR1028003 head normal 0.598847 SRR1565819 brain normal 0.585222 SRR065197 3 dpf U1C knockout 0.5834090000000001 SRR1342217 embryo infection with Mycobacterium marinum 0.580026 SRR592699 pineal gland normal 0.573751 SRR1534350 larvae 5 ug/l BDE47 treatment 0.572258 SRR535978 larvae normal 0.567574 SRR1299124 caudal fin Zero day time after treatment 0.563554 SRR1647684 spleen SVCV treatment 0.563319 ERR594417 retina normal 0.557012 SRR516127 skin male and 5 month 0.5481 SRR942764 embryo myd88-/- 0.538048 SRR535852 larvae hoxb1b mut 0.531898 SRR1299127 caudal fin Two days time after treatment 0.5235810000000001 SRR535847 larvae normal 0.5204439999999999 SRR516125 skin male and 3.5 year 0.510512 SRR527833 5 dpf normal 0.5046350000000001 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.49844799999999995 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.49378 SRR801556 embryo RPS19 and p53 morpholino 0.489522 ERR594416 retina transgenic flk1 0.481221 SRR1299129 caudal fin Seven days time after treatment 0.47643500000000005 SRR633550 larvae exposed to hypoxia stress 0.47285900000000003 SRR1005529 embryo control morpholino 0.46054700000000004 SRR801554 embryo control morpholino 0.459855 SRR1523211 embryo control morpholino 0.454653 SRR610741 3 dpf express Ras 0.450589 SRR726542 5 dpf infection with control 0.447082 SRR1647680 head kidney SVCV treatment 0.44687 SRR516135 skin male and 5 month 0.44567799999999996 SRR1647681 head kidney SVCV treatment 0.44472799999999996 SRR1562529 intestine and pancreas normal 0.43575 SRR1299125 caudal fin Half day time after treatment 0.434788 SRR1188160 embryo Insulin 4 hpi 0.434138 SRR610740 3 dpf normal 0.43165299999999995 SRR519742 4 dpf VD3 treatment 0.430562 SRR1562532 spleen normal 0.427019 SRR1048059 pineal gland light 0.422782 SRR516129 skin male and 5 month 0.41692700000000005 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.41321599999999997 SRR891495 heart normal 0.412908 SRR1005530 embryo RPL11 morpholino 0.403217 SRR800045 muscle normal 0.396214 SRR516122 skin male and 3.5 year 0.395149 SRR519727 6 dpf FETOH treatment 0.393386 SRR1291414 5 dpi normal 0.386365 SRR1167762 embryo ptpn6 morpholino 0.386201 SRR1048061 pineal gland dark 0.38606999999999997 SRR610742 3 dpf express NICD 0.383652 SRR519747 6 dpf VD3 treatment 0.38306999999999997 SRR800043 sphere stage normal 0.381849 SRR1291417 5 dpi injected marinum 0.379925 SRR535850 larvae hoxb1b mut 0.37604499999999996 SRR519722 4 dpf FETOH treatment 0.371367 SRR516128 skin male and 5 month 0.36695500000000003 SRR726541 5 dpf infection with Mycobacterium marinum 0.366198 SRR1562531 muscle normal 0.363929 ERR023143 swim bladder normal 0.363629 SRR891512 blood normal 0.343591 SRR1565817 brain normal 0.341937 SRR633544 larvae exposed to cold stress 0.33614099999999997 SRR891511 brain normal 0.335461 SRR516131 skin male and 5 month 0.329252 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.326948 SRR633516 larvae normal 0.320214 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.31824600000000003 SRR801555 embryo RPS19 morpholino 0.317738 SRR942769 embryo myd88+/+ 0.31758000000000003 SRR1647679 head kidney normal 0.311754 SRR516124 skin male and 3.5 year 0.309647 SRR519752 7 dpf VD3 treatment 0.307424 SRR519732 7 dpf FETOH treatment 0.306125 SRR516133 skin male and 5 month 0.305001 SRR941749 anterior pectoral fin normal 0.286621 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.285839 SRR1565805 brain normal 0.284911 SRR1342218 embryo marco morpholino 0.277366 SRR1565815 brain normal 0.276416 SRR516123 skin male and 3.5 year 0.275951 ERR023145 heart normal 0.260552 SRR535851 larvae normal 0.25578 SRR1562530 liver normal 0.24869000000000002 SRR535849 larvae normal 0.246571 SRR891504 liver normal 0.244927 SRR592701 pineal gland normal 0.24104 SRR527834 head normal 0.235394 SRR1342216 embryo norml 0.22274699999999997 SRR700534 heart control morpholino 0.21887600000000001 SRR516130 skin male and 5 month 0.21783000000000002 SRR592702 pineal gland normal 0.21289 SRR592703 pineal gland normal 0.20465999999999998 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.202579 SRR516126 skin male and 5 month 0.199496 SRR1035239 liver transgenic mCherry control 0.197553 SRR1534349 larvae DMSO vehicle 0.197398 SRR1647683 spleen SVCV treatment 0.189642 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.187567 SRR1534351 larvae 500 ug/l BDE47 treatment 0.186106 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.17661300000000002 SRR891510 muscle normal 0.1597 SRR1167756 embryo mpeg1 morpholino 0.15921300000000002 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.114035 SRR1565807 brain normal 0.113899 SRR516132 skin male and 5 month 0.10539000000000001 SRR527835 tail normal 0.101175 SRR592700 pineal gland normal 0.0937692 SRR800037 egg normal 0.0861304 ERR023146 head kidney normal 0.0831469 SRR516121 skin male and 3.5 year 0.060157600000000006 SRR1562528 eye normal 0.0417847 SRR1648855 brain normal 0.017043700000000002 SRR1621206 embryo normal 0.014808000000000002 SRR372789 1K cell normal 0.00466161