sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 28.7538 SRR1299125 caudal fin Half day time after treatment 25.4664 SRR1299129 caudal fin Seven days time after treatment 23.4219 SRR1299126 caudal fin One day time after treatment 17.971 SRR1299127 caudal fin Two days time after treatment 17.4519 SRR1299128 caudal fin Three days time after treatment 14.3548 SRR941753 posterior pectoral fin normal 13.843 SRR941749 anterior pectoral fin normal 13.2736 SRR516133 skin male and 5 month 12.0715 SRR516125 skin male and 3.5 year 10.7588 SRR516123 skin male and 3.5 year 9.86534 SRR1708346 embryo SIBPS 9.78805 SRR1708344 embryo MUTPS 9.685410000000001 SRR527836 24hpf normal 9.62305 SRR749515 24 hpf eif3ha morphant 8.795589999999999 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 8.774189999999999 SRR1167763 embryo ptpn6 morpholino and bacterial infection 8.40286 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 8.33007 SRR1205160 5dpf transgenic sqET20 and GFP+ 8.27541 SRR527840 24hpf normal 8.02506 SRR516124 skin male and 3.5 year 7.35683 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.09403 SRR516129 skin male and 5 month 6.973510000000001 SRR658533 bud normal 6.6714199999999995 SRR776510 embryo Salmonella infected and miR-146 knockdown 6.671069999999999 SRR516121 skin male and 3.5 year 6.65448 SRR516126 skin male and 5 month 6.51599 SRR658543 6 somite Gata5 morphan 6.48616 SRR749514 24 hpf normal 6.35531 SRR658547 6 somite Gata5/6 morphant 6.20506 SRR658541 6 somite normal 6.14267 SRR658545 6 somite Gata6 morphant 6.05475 SRR776507 embryo normal 5.9543800000000005 SRR516130 skin male and 5 month 5.861619999999999 SRR776508 embryo miR-146 knockdown 5.81034 SRR1188156 embryo Control PBS 4 hpi 5.6173 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 5.43895 SRR1167752 embryo normal 5.407 SRR776509 embryo Salmonella infected 5.35541 SRR516122 skin male and 3.5 year 5.26346 SRR658537 bud Gata6 morphant 5.23807 SRR1028002 head normal 5.19037 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 5.17709 SRR610741 3 dpf express Ras 5.16974 SRR658535 bud Gata5 morphant 5.0593699999999995 SRR516128 skin male and 5 month 5.05103 SRR1167753 embryo bacterial infection 5.02225 SRR1167756 embryo mpeg1 morpholino 4.85001 SRR516134 skin male and 5 month 4.8156099999999995 SRR1188148 embryo Control PBS 0.5 hpi 4.7793 SRR1035981 13 hpf rx3+/+ or rx3+/- 4.77706 SRR1534351 larvae 500 ug/l BDE47 treatment 4.71213 SRR1104058 heart normal 4.69171 SRR535978 larvae normal 4.64102 SRR942769 embryo myd88+/+ 4.5317099999999995 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 4.41625 SRR610740 3 dpf normal 4.38199 SRR1534349 larvae DMSO vehicle 4.38042 SRR1534350 larvae 5 ug/l BDE47 treatment 4.33305 SRR630463 5 dpf normal 4.26916 SRR1104059 heart kctd10 mut 4.22213 SRR1342216 embryo norml 4.21211 SRR516132 skin male and 5 month 4.207669999999999 SRR1708345 embryo SIBAS 4.14907 SRR1167757 embryo mpeg1 morpholino and bacterial infection 4.12845 SRR1188152 embryo Insulin 0.5 hpi 4.11515 SRR535986 larvae nhsl1b mut 4.06683 SRR1035978 13 hpf rx3-/- 3.9976599999999998 SRR1342218 embryo marco morpholino 3.9700599999999997 SRR1035984 13 hpf normal 3.8879900000000003 SRR1342217 embryo infection with Mycobacterium marinum 3.8853800000000005 SRR1523211 embryo control morpholino 3.8678199999999996 SRR1523214 embryo glut12 morpholino 3.7808 SRR535943 larvae vangl mut 3.77066 SRR630464 5 dpf injected epidermidis 3.70287 SRR516135 skin male and 5 month 3.6781800000000002 SRR658539 bud Gata5/6 morphant 3.6666199999999995 SRR1708343 embryo MUTAS 3.6261699999999997 SRR1028003 head normal 3.62411 SRR527832 16-36 hpf normal 3.59521 SRR610742 3 dpf express NICD 3.58124 SRR1167762 embryo ptpn6 morpholino 3.56264 SRR527844 24hpf normal 3.56051 SRR516131 skin male and 5 month 3.55438 SRR633544 larvae exposed to cold stress 3.5535 SRR516127 skin male and 5 month 3.4626300000000003 SRR633550 larvae exposed to hypoxia stress 3.45296 SRR797911 embryo prdm1-/- 3.43876 SRR535913 larvae krox mut 3.34796 SRR527834 head normal 3.29757 SRR1028004 head normal 3.29745 SRR527833 5 dpf normal 3.2832800000000004 SRR797908 embryo normal 3.2002200000000003 SRR038627 embryo control morpholino 3.13263 SRR535926 larvae normal 3.13172 SRR1562528 eye normal 3.09769 SRR1291417 5 dpi injected marinum 3.0928400000000003 SRR1004789 larvae impdh2 morpholino 3.05667 SRR1291414 5 dpi normal 3.04541 SRR633516 larvae normal 3.0339 SRR535848 larvae hoxb1b mut 3.03177 SRR942764 embryo myd88-/- 3.008 SRR038625 embryo traf6 morpholino 2.9975 SRR535890 larvae normal 2.98909 SRR535852 larvae hoxb1b mut 2.95102 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.94771 SRR535849 larvae normal 2.8380799999999997 SRR797914 embryo pbx2/4-MO 2.82833 SRR065197 3 dpf U1C knockout 2.69788 SRR535851 larvae normal 2.64005 SRR535850 larvae hoxb1b mut 2.54842 SRR535847 larvae normal 2.5077599999999998 SRR519717 2 dpf FETOH treatment 2.48287 SRR038626 embryo control morpholino and bacterial infection 2.44753 SRR038624 embryo traf6 morpholino and bacterial infection 2.41925 SRR891512 blood normal 2.4081799999999998 SRR519742 4 dpf VD3 treatment 2.40729 SRR1004786 larvae control morpholino 2.3949599999999998 SRR519727 6 dpf FETOH treatment 2.39122 SRR519732 7 dpf FETOH treatment 2.37763 SRR1188160 embryo Insulin 4 hpi 2.37237 SRR1004788 larvae impdh1b morpholino 2.3696099999999998 SRR519722 4 dpf FETOH treatment 2.32421 SRR831692 embryo normal 2.25382 SRR519752 7 dpf VD3 treatment 2.248 SRR519737 2 dpf VD3 treatment 2.11381 SRR519747 6 dpf VD3 treatment 2.06992 SRR726541 5 dpf infection with Mycobacterium marinum 1.98138 SRR592701 pineal gland normal 1.89166 SRR065196 3 dpf normal 1.8307900000000001 SRR700537 heart Gata4 morpholino 1.81824 SRR1004787 larvae impdh1a morpholino 1.80266 SRR726540 5 dpf normal 1.78279 SRR726542 5 dpf infection with control 1.7816599999999998 SRR1039571 gastrointestinal diet 0.1 NPM 1.5357399999999999 SRR592699 pineal gland normal 1.32755 SRR801555 embryo RPS19 morpholino 1.22148 SRR592703 pineal gland normal 1.18024 SRR594771 endothelium normal 1.12805 SRR1021215 sphere stage Mzeomesa 1.11356 SRR1004785 larvae normal 1.10915 SRR1562531 muscle normal 1.10225 SRR1005530 embryo RPL11 morpholino 1.04315 SRR800046 sphere stage 5azaCyD treatment 1.0374700000000001 SRR1021213 sphere stage normal 1.00482 ERR023146 head kidney normal 0.988663 SRR700534 heart control morpholino 0.9361940000000001 SRR592700 pineal gland normal 0.809465 SRR800049 sphere stage control treatment 0.62505 SRR748489 egg normal 0.589785 SRR1205154 5dpf transgenic sqET20 0.577926 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.572241 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.5609460000000001 SRR527835 tail normal 0.5355439999999999 SRR592702 pineal gland normal 0.529293 SRR514028 retina control morpholino 0.528566 SRR1039573 gastrointestinal diet 0.75 NPM 0.45754700000000004 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.447053 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.44405900000000004 SRR594769 blood normal 0.33805 SRR748491 germ ring normal 0.311949 SRR801556 embryo RPS19 and p53 morpholino 0.276922 SRR800043 sphere stage normal 0.276848 SRR1048061 pineal gland dark 0.270127 SRR1035239 liver transgenic mCherry control 0.265817 SRR1005529 embryo control morpholino 0.257537 SRR801554 embryo control morpholino 0.25715 ERR023145 heart normal 0.21817899999999998 ERR023144 brain normal 0.18595599999999998 ERR023143 swim bladder normal 0.185665 SRR1035237 liver transgenic UHRF1 0.182646 SRR592698 pineal gland normal 0.175844 SRR1562529 intestine and pancreas normal 0.16711099999999998 SRR514030 retina id2a morpholino 0.155796 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.142574 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.130325 SRR1647680 head kidney SVCV treatment 0.11341500000000002 SRR748488 sperm normal 0.10463 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.103578 SRR891510 muscle normal 0.09177410000000001 SRR1562533 testis normal 0.0889067 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.08695750000000001 SRR1647681 head kidney SVCV treatment 0.07947919999999999 ERR594416 retina transgenic flk1 0.07409650000000001 SRR1569495 embryo normal 0.06387469999999999 SRR1647679 head kidney normal 0.0517798 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.049163099999999994 SRR1565813 brain normal 0.047529 SRR372800 2 dpf normal 0.0460985 SRR1565819 brain normal 0.0454011 SRR1565805 brain normal 0.043442800000000004 SRR1565815 brain normal 0.043024 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.042454 SRR1565811 brain normal 0.0397309 SRR1565817 brain normal 0.0368698 SRR1565807 brain normal 0.0336093 SRR1569491 embryo normal 0.0334885 SRR372798 28 hpf normal 0.030024000000000002 SRR1565809 brain normal 0.0275928 SRR1562532 spleen normal 0.026755200000000003 SRR1647683 spleen SVCV treatment 0.0266552 ERR594418 retina transgenic flk1 and develop tumors 0.0202092 ERR594417 retina normal 0.00708336