sample tissue condition fpkm SRR535978 larvae normal 75.7296 SRR1569491 embryo normal 64.87100000000001 SRR535986 larvae nhsl1b mut 62.9126 SRR514028 retina control morpholino 61.0973 SRR658547 6 somite Gata5/6 morphant 53.9777 SRR658545 6 somite Gata6 morphant 52.638999999999996 SRR594771 endothelium normal 50.2702 SRR658537 bud Gata6 morphant 50.0116 SRR658533 bud normal 48.8168 SRR776507 embryo normal 44.177 SRR658541 6 somite normal 44.093999999999994 SRR1569495 embryo normal 42.3163 SRR527844 24hpf normal 40.7144 SRR658535 bud Gata5 morphant 39.8599 SRR800037 egg normal 39.2752 SRR1021215 sphere stage Mzeomesa 39.1069 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 38.4243 SRR1021213 sphere stage normal 38.1476 SRR527836 24hpf normal 37.6239 SRR658543 6 somite Gata5 morphan 36.4245 SRR527840 24hpf normal 36.2613 SRR1004786 larvae control morpholino 35.5703 SRR658539 bud Gata5/6 morphant 35.0967 SRR1708345 embryo SIBAS 34.2973 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 33.9237 ERR023143 swim bladder normal 32.87 SRR514030 retina id2a morpholino 32.7534 SRR776508 embryo miR-146 knockdown 32.5627 SRR776510 embryo Salmonella infected and miR-146 knockdown 31.6142 SRR749515 24 hpf eif3ha morphant 30.4713 SRR1291417 5 dpi injected marinum 29.6078 SRR797908 embryo normal 29.0663 SRR1205154 5dpf transgenic sqET20 28.9262 SRR797911 embryo prdm1-/- 28.8003 SRR1299125 caudal fin Half day time after treatment 28.4586 SRR1167756 embryo mpeg1 morpholino 28.3342 SRR797914 embryo pbx2/4-MO 27.7708 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 27.4687 SRR1004785 larvae normal 27.3809 SRR1299126 caudal fin One day time after treatment 26.9899 ERR023146 head kidney normal 26.7367 SRR749514 24 hpf normal 26.5476 ERR023145 heart normal 26.5074 SRR1167757 embryo mpeg1 morpholino and bacterial infection 26.4849 SRR776509 embryo Salmonella infected 25.8019 ERR594417 retina normal 25.4038 SRR797917 embryo pbx2/4-MO and prdm1-/- 25.3366 SRR630464 5 dpf injected epidermidis 25.2998 SRR1708346 embryo SIBPS 24.9225 SRR1291414 5 dpi normal 24.8531 SRR700537 heart Gata4 morpholino 24.5584 SRR1004788 larvae impdh1b morpholino 24.3523 ERR594418 retina transgenic flk1 and develop tumors 24.0099 SRR1035981 13 hpf rx3+/+ or rx3+/- 23.9152 SRR630463 5 dpf normal 23.7235 SRR1342218 embryo marco morpholino 23.664 SRR748491 germ ring normal 23.570999999999998 SRR1188148 embryo Control PBS 0.5 hpi 23.1764 SRR1299129 caudal fin Seven days time after treatment 22.6354 SRR516133 skin male and 5 month 22.4075 SRR1523214 embryo glut12 morpholino 22.2703 SRR700534 heart control morpholino 22.1933 SRR1188152 embryo Insulin 0.5 hpi 22.1865 SRR1299128 caudal fin Three days time after treatment 22.0252 SRR1299127 caudal fin Two days time after treatment 22.0087 SRR1167753 embryo bacterial infection 21.3964 SRR594769 blood normal 21.3941 SRR1167752 embryo normal 20.9484 SRR1035978 13 hpf rx3-/- 20.4014 SRR1342216 embryo norml 20.097 SRR1523211 embryo control morpholino 19.7725 SRR942769 embryo myd88+/+ 19.5246 SRR1167763 embryo ptpn6 morpholino and bacterial infection 19.1609 SRR1167762 embryo ptpn6 morpholino 19.0126 SRR1342217 embryo infection with Mycobacterium marinum 18.984 SRR1708343 embryo MUTAS 18.852999999999998 SRR1188156 embryo Control PBS 4 hpi 18.7675 SRR1188160 embryo Insulin 4 hpi 18.4778 SRR1708344 embryo MUTPS 18.319000000000003 SRR535943 larvae vangl mut 17.9949 ERR594416 retina transgenic flk1 17.6513 SRR1005529 embryo control morpholino 17.5612 SRR801554 embryo control morpholino 17.5347 SRR1104058 heart normal 17.4453 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 16.8622 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 16.6312 SRR942764 embryo myd88-/- 16.3339 SRR1035984 13 hpf normal 16.2249 SRR1299124 caudal fin Zero day time after treatment 16.0705 SRR516134 skin male and 5 month 16.0414 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 15.911 SRR535890 larvae normal 15.6532 SRR610740 3 dpf normal 15.3075 SRR1205160 5dpf transgenic sqET20 and GFP+ 15.1297 SRR1028003 head normal 15.0158 SRR800046 sphere stage 5azaCyD treatment 14.9807 SRR535926 larvae normal 14.9046 SRR886455 128 cell 4-thio-UTP metabolic labeling 14.7952 SRR1565819 brain normal 14.5736 SRR1104059 heart kctd10 mut 14.0713 SRR1562530 liver normal 14.0481 SRR1565813 brain normal 14.0341 SRR038626 embryo control morpholino and bacterial infection 13.9606 ERR023144 brain normal 13.860999999999999 SRR516122 skin male and 3.5 year 13.8116 SRR1565817 brain normal 13.7626 SRR886457 512 cell 4-thio-UTP metabolic labeling 13.4509 SRR516128 skin male and 5 month 13.2191 SRR527832 16-36 hpf normal 13.0706 SRR527833 5 dpf normal 12.8378 SRR1565805 brain normal 12.6996 SRR1028004 head normal 12.695 SRR1565811 brain normal 12.5509 SRR1028002 head normal 12.4438 SRR1562528 eye normal 12.4265 SRR1565807 brain normal 12.4026 SRR516131 skin male and 5 month 12.3719 SRR592699 pineal gland normal 12.2173 SRR801556 embryo RPS19 and p53 morpholino 12.2144 SRR1004787 larvae impdh1a morpholino 12.1694 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 12.065 SRR535913 larvae krox mut 11.7094 SRR831692 embryo normal 11.6972 SRR1565809 brain normal 11.6777 SRR1534350 larvae 5 ug/l BDE47 treatment 11.5709 SRR038624 embryo traf6 morpholino and bacterial infection 11.5563 SRR516123 skin male and 3.5 year 11.5383 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 11.4641 SRR1565815 brain normal 11.4467 SRR801555 embryo RPS19 morpholino 11.4005 SRR610742 3 dpf express NICD 11.009 SRR516124 skin male and 3.5 year 10.8429 SRR592703 pineal gland normal 10.657 SRR516121 skin male and 3.5 year 10.2905 SRR800045 muscle normal 10.0796 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 9.93111 SRR038627 embryo control morpholino 9.70242 SRR1005530 embryo RPL11 morpholino 9.6565 SRR1534349 larvae DMSO vehicle 9.638919999999999 SRR1048061 pineal gland dark 9.63888 SRR1048059 pineal gland light 9.45389 SRR592702 pineal gland normal 9.29326 SRR038625 embryo traf6 morpholino 9.19032 SRR592698 pineal gland normal 9.124260000000001 SRR516127 skin male and 5 month 9.04288 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 8.977139999999999 SRR800049 sphere stage control treatment 8.52087 SRR1534351 larvae 500 ug/l BDE47 treatment 8.519860000000001 SRR516125 skin male and 3.5 year 8.476189999999999 SRR592701 pineal gland normal 8.4667 SRR516130 skin male and 5 month 8.076410000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 8.04977 SRR516129 skin male and 5 month 8.01671 SRR886456 256 cell 4-thio-UTP metabolic labeling 7.89727 SRR1562533 testis normal 7.77825 SRR610741 3 dpf express Ras 7.618760000000001 SRR519717 2 dpf FETOH treatment 7.6147800000000005 SRR1562529 intestine and pancreas normal 7.56355 SRR065196 3 dpf normal 7.46073 SRR535848 larvae hoxb1b mut 7.2147 SRR519737 2 dpf VD3 treatment 7.0394 SRR941749 anterior pectoral fin normal 6.97457 SRR891510 muscle normal 6.95637 SRR1647680 head kidney SVCV treatment 6.747669999999999 SRR1647682 spleen normal 6.73808 SRR1562532 spleen normal 6.70016 SRR065197 3 dpf U1C knockout 6.674289999999999 SRR527834 head normal 6.67166 SRR535847 larvae normal 6.6233 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 6.423769999999999 SRR800043 sphere stage normal 6.413819999999999 SRR1562531 muscle normal 6.39215 SRR633516 larvae normal 6.3270800000000005 SRR1647683 spleen SVCV treatment 6.21769 SRR535851 larvae normal 6.11382 SRR1647679 head kidney normal 6.03949 SRR633550 larvae exposed to hypoxia stress 6.0214300000000005 SRR1035237 liver transgenic UHRF1 5.98181 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 5.74605 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 5.52545 SRR592700 pineal gland normal 5.51066 SRR535852 larvae hoxb1b mut 5.48793 SRR535849 larvae normal 5.3128 SRR516126 skin male and 5 month 5.29063 SRR941753 posterior pectoral fin normal 4.97282 SRR535850 larvae hoxb1b mut 4.884440000000001 SRR633544 larvae exposed to cold stress 4.85304 SRR748490 1 kcell normal 4.767440000000001 SRR519742 4 dpf VD3 treatment 4.56018 SRR1647684 spleen SVCV treatment 4.51764 SRR519747 6 dpf VD3 treatment 4.49932 SRR726540 5 dpf normal 4.4563 SRR1039573 gastrointestinal diet 0.75 NPM 4.37817 SRR1004789 larvae impdh2 morpholino 4.3221099999999995 SRR516135 skin male and 5 month 4.29103 SRR519727 6 dpf FETOH treatment 4.24787 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 4.22931 SRR519722 4 dpf FETOH treatment 4.21742 SRR1647681 head kidney SVCV treatment 4.1224 SRR519732 7 dpf FETOH treatment 3.92129 SRR519752 7 dpf VD3 treatment 3.9063 SRR1035239 liver transgenic mCherry control 2.95147 SRR891511 brain normal 2.8111 SRR1039571 gastrointestinal diet 0.1 NPM 2.80353 SRR748489 egg normal 2.7023 SRR748488 sperm normal 2.54583 SRR527835 tail normal 2.5369 SRR726542 5 dpf infection with control 2.48858 SRR891504 liver normal 2.16256 SRR726541 5 dpf infection with Mycobacterium marinum 2.12807 SRR891495 heart normal 1.8262599999999998 SRR891512 blood normal 1.4908700000000001 SRR516132 skin male and 5 month 1.01304 SRR372793 shield normal 0.157937