sample tissue condition fpkm SRR1299125 caudal fin Half day time after treatment 15.3289 SRR1299127 caudal fin Two days time after treatment 13.0911 SRR1299126 caudal fin One day time after treatment 12.7468 SRR1299124 caudal fin Zero day time after treatment 12.5052 SRR1299129 caudal fin Seven days time after treatment 11.0304 ERR023145 heart normal 10.3572 SRR1299128 caudal fin Three days time after treatment 7.7096 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 6.5943 SRR516123 skin male and 3.5 year 5.5831 ERR023143 swim bladder normal 4.6883 SRR941749 anterior pectoral fin normal 4.683680000000001 SRR516126 skin male and 5 month 4.59802 SRR1562533 testis normal 4.59504 SRR516127 skin male and 5 month 4.40739 SRR516131 skin male and 5 month 4.09089 SRR516122 skin male and 3.5 year 3.97275 SRR516121 skin male and 3.5 year 3.9245099999999997 SRR516128 skin male and 5 month 3.90754 SRR516125 skin male and 3.5 year 3.84309 SRR516132 skin male and 5 month 3.8312199999999996 SRR594771 endothelium normal 3.8222099999999997 SRR941753 posterior pectoral fin normal 3.6719699999999995 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 3.1813 SRR1291417 5 dpi injected marinum 2.97246 SRR748488 sperm normal 2.9672099999999997 SRR516124 skin male and 3.5 year 2.9431 ERR023146 head kidney normal 2.80903 SRR516133 skin male and 5 month 2.74582 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.48912 SRR1562528 eye normal 2.4843900000000003 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.35994 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.3020400000000003 SRR1562530 liver normal 2.2511099999999997 SRR516134 skin male and 5 month 2.16244 SRR1562531 muscle normal 2.14244 SRR1562529 intestine and pancreas normal 2.09861 SRR700534 heart control morpholino 2.02872 SRR1028002 head normal 1.8939599999999999 SRR1167753 embryo bacterial infection 1.80883 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.8073400000000002 SRR1534351 larvae 500 ug/l BDE47 treatment 1.64542 SRR516135 skin male and 5 month 1.55659 SRR516130 skin male and 5 month 1.5428600000000001 SRR516129 skin male and 5 month 1.54227 SRR610741 3 dpf express Ras 1.51636 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.38916 SRR700537 heart Gata4 morpholino 1.33859 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.3280100000000001 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.3243 SRR594769 blood normal 1.3002200000000002 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.24852 SRR1647683 spleen SVCV treatment 1.21249 SRR527834 head normal 1.2011399999999999 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.18545 SRR630464 5 dpf injected epidermidis 1.17788 SRR1342217 embryo infection with Mycobacterium marinum 1.16121 SRR535986 larvae nhsl1b mut 1.15403 SRR1035239 liver transgenic mCherry control 1.15141 SRR1028004 head normal 1.13477 SRR1104059 heart kctd10 mut 1.13004 SRR1167752 embryo normal 1.1041 SRR1342218 embryo marco morpholino 1.0967 SRR1647680 head kidney SVCV treatment 1.09582 SRR1167762 embryo ptpn6 morpholino 1.0905200000000002 SRR527840 24hpf normal 1.04235 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.03186 SRR1562532 spleen normal 1.01271 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.969073 ERR594418 retina transgenic flk1 and develop tumors 0.957408 SRR1188148 embryo Control PBS 0.5 hpi 0.952717 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.9154770000000001 SRR1039571 gastrointestinal diet 0.1 NPM 0.9141469999999999 SRR1048059 pineal gland light 0.911171 SRR1291414 5 dpi normal 0.9026350000000001 SRR038626 embryo control morpholino and bacterial infection 0.9015700000000001 SRR1342216 embryo norml 0.883451 SRR1167756 embryo mpeg1 morpholino 0.87798 SRR1188160 embryo Insulin 4 hpi 0.8765299999999999 SRR1534349 larvae DMSO vehicle 0.8654790000000001 SRR630463 5 dpf normal 0.800528 SRR592702 pineal gland normal 0.794268 SRR1569491 embryo normal 0.7891859999999999 SRR519732 7 dpf FETOH treatment 0.78236 SRR1028003 head normal 0.7519319999999999 SRR038624 embryo traf6 morpholino and bacterial infection 0.750616 SRR1188156 embryo Control PBS 4 hpi 0.731538 SRR1534350 larvae 5 ug/l BDE47 treatment 0.727631 SRR776509 embryo Salmonella infected 0.726873 SRR800045 muscle normal 0.707124 SRR610740 3 dpf normal 0.703778 SRR1205154 5dpf transgenic sqET20 0.690227 SRR519752 7 dpf VD3 treatment 0.684144 SRR1104058 heart normal 0.6815760000000001 SRR592698 pineal gland normal 0.664666 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.657357 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.651998 SRR658547 6 somite Gata5/6 morphant 0.6307590000000001 SRR535852 larvae hoxb1b mut 0.625049 SRR592703 pineal gland normal 0.624779 SRR527836 24hpf normal 0.614779 ERR023144 brain normal 0.6140329999999999 SRR610742 3 dpf express NICD 0.608666 SRR535848 larvae hoxb1b mut 0.60129 SRR1647679 head kidney normal 0.578781 SRR519747 6 dpf VD3 treatment 0.5782010000000001 SRR1569495 embryo normal 0.578036 SRR592701 pineal gland normal 0.5278930000000001 SRR1048061 pineal gland dark 0.523015 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.52084 SRR658541 6 somite normal 0.519675 SRR942764 embryo myd88-/- 0.5124029999999999 SRR1708346 embryo SIBPS 0.502347 SRR535978 larvae normal 0.49860200000000005 SRR658537 bud Gata6 morphant 0.493875 SRR658535 bud Gata5 morphant 0.48628999999999994 SRR065197 3 dpf U1C knockout 0.479764 SRR1523211 embryo control morpholino 0.472709 SRR801556 embryo RPS19 and p53 morpholino 0.461279 SRR1188152 embryo Insulin 0.5 hpi 0.44252600000000003 SRR726540 5 dpf normal 0.44143999999999994 SRR891512 blood normal 0.440733 SRR038627 embryo control morpholino 0.435187 SRR592700 pineal gland normal 0.428249 SRR535850 larvae hoxb1b mut 0.4191 SRR891510 muscle normal 0.416505 SRR726541 5 dpf infection with Mycobacterium marinum 0.40316399999999997 SRR1523214 embryo glut12 morpholino 0.401237 SRR535851 larvae normal 0.400868 SRR1647684 spleen SVCV treatment 0.39974899999999997 SRR658545 6 somite Gata6 morphant 0.39857 SRR1647681 head kidney SVCV treatment 0.39260300000000004 SRR658533 bud normal 0.38950300000000004 SRR535849 larvae normal 0.383623 SRR633516 larvae normal 0.36841999999999997 SRR535847 larvae normal 0.365633 SRR749515 24 hpf eif3ha morphant 0.365398 SRR942769 embryo myd88+/+ 0.363917 SRR1708344 embryo MUTPS 0.36027800000000004 SRR527835 tail normal 0.347958 SRR592699 pineal gland normal 0.34331799999999996 SRR776508 embryo miR-146 knockdown 0.335539 SRR1647682 spleen normal 0.331478 SRR527833 5 dpf normal 0.328151 SRR519727 6 dpf FETOH treatment 0.32598699999999997 SRR1039573 gastrointestinal diet 0.75 NPM 0.320493 SRR1565811 brain normal 0.313364 SRR749514 24 hpf normal 0.302677 SRR527844 24hpf normal 0.299232 SRR1565807 brain normal 0.29186 SRR748489 egg normal 0.29127 SRR658543 6 somite Gata5 morphan 0.284956 SRR658539 bud Gata5/6 morphant 0.273434 SRR891495 heart normal 0.27134 SRR038625 embryo traf6 morpholino 0.27064499999999997 SRR831692 embryo normal 0.270425 SRR633544 larvae exposed to cold stress 0.27018200000000003 SRR065196 3 dpf normal 0.26970700000000003 SRR726542 5 dpf infection with control 0.266901 SRR891504 liver normal 0.261304 SRR1565815 brain normal 0.25563600000000003 SRR1708345 embryo SIBAS 0.252744 SRR519742 4 dpf VD3 treatment 0.2465 SRR1565805 brain normal 0.241277 SRR1565813 brain normal 0.23453600000000002 SRR776507 embryo normal 0.23277199999999998 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.232084 SRR801555 embryo RPS19 morpholino 0.21669499999999997 SRR633550 larvae exposed to hypoxia stress 0.211892 SRR519722 4 dpf FETOH treatment 0.206465 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.193743 SRR800046 sphere stage 5azaCyD treatment 0.18978299999999998 SRR797908 embryo normal 0.179517 SRR519717 2 dpf FETOH treatment 0.178017 SRR1565819 brain normal 0.166918 SRR891511 brain normal 0.16228499999999998 SRR1565809 brain normal 0.159729 SRR797911 embryo prdm1-/- 0.157842 SRR1035984 13 hpf normal 0.15453599999999998 SRR797914 embryo pbx2/4-MO 0.146607 SRR514028 retina control morpholino 0.145378 SRR1565817 brain normal 0.14391900000000002 SRR1005530 embryo RPL11 morpholino 0.14206400000000002 ERR594417 retina normal 0.140872 SRR535926 larvae normal 0.139649 SRR535913 larvae krox mut 0.13481400000000002 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.127682 SRR1035237 liver transgenic UHRF1 0.12155 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.12018 SRR800049 sphere stage control treatment 0.117224 ERR594416 retina transgenic flk1 0.110569 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.10679000000000001 SRR535943 larvae vangl mut 0.09787699999999999 SRR519737 2 dpf VD3 treatment 0.0952199 SRR748490 1 kcell normal 0.08437330000000001 SRR1004788 larvae impdh1b morpholino 0.07086260000000001 SRR1021215 sphere stage Mzeomesa 0.054711 SRR1035978 13 hpf rx3-/- 0.045864499999999996 SRR1005529 embryo control morpholino 0.041850599999999995 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.041814300000000006 SRR801554 embryo control morpholino 0.0417744 SRR1021213 sphere stage normal 0.040925300000000005 SRR514030 retina id2a morpholino 0.039416 SRR957181 heart normal 0.0328224 SRR957180 heart 7 days after heart tip amputation 0.028815499999999997 SRR1004786 larvae control morpholino 0.0276449 SRR527832 16-36 hpf normal 0.022000000000000002 SRR1708343 embryo MUTAS 0.0208577 SRR800037 egg normal 0.0152192 SRR886455 128 cell 4-thio-UTP metabolic labeling 3.94432e-05 SRR1004785 larvae normal 2.01908e-05