sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 19.7947 SRR941749 anterior pectoral fin normal 14.9771 SRR1299125 caudal fin Half day time after treatment 13.9879 SRR1299126 caudal fin One day time after treatment 11.2065 SRR941753 posterior pectoral fin normal 11.0959 SRR1299129 caudal fin Seven days time after treatment 9.7465 SRR516125 skin male and 3.5 year 9.09585 SRR1299127 caudal fin Two days time after treatment 9.03992 SRR516123 skin male and 3.5 year 8.90803 SRR516133 skin male and 5 month 6.21216 SRR516131 skin male and 5 month 6.13917 SRR1708344 embryo MUTPS 6.131819999999999 SRR516121 skin male and 3.5 year 6.00442 SRR1708346 embryo SIBPS 5.42745 SRR516122 skin male and 3.5 year 5.3998099999999996 SRR516130 skin male and 5 month 5.29197 SRR1299128 caudal fin Three days time after treatment 4.78341 SRR516128 skin male and 5 month 4.58501 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 3.8898900000000003 SRR516126 skin male and 5 month 3.6938199999999997 SRR516129 skin male and 5 month 3.6617300000000004 SRR527836 24hpf normal 3.6491 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 3.2438700000000003 SRR527840 24hpf normal 3.20657 SRR527844 24hpf normal 3.13364 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.95241 ERR023146 head kidney normal 2.92315 SRR516127 skin male and 5 month 2.81302 SRR516134 skin male and 5 month 2.65522 SRR535986 larvae nhsl1b mut 2.56202 SRR1028002 head normal 2.50038 SRR535978 larvae normal 2.4008 SRR516132 skin male and 5 month 2.2608599999999996 SRR1708345 embryo SIBAS 2.1821599999999997 SRR527834 head normal 2.1404900000000002 SRR1342218 embryo marco morpholino 1.92136 SRR592703 pineal gland normal 1.8665900000000002 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 1.8309900000000001 SRR1562528 eye normal 1.7910099999999998 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.7833900000000003 SRR1523211 embryo control morpholino 1.7126099999999997 SRR1035984 13 hpf normal 1.6748 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.63601 SRR1342216 embryo norml 1.5779299999999998 SRR1167752 embryo normal 1.53531 SRR1028004 head normal 1.49652 SRR748491 germ ring normal 1.4555799999999999 SRR630464 5 dpf injected epidermidis 1.45097 SRR942764 embryo myd88-/- 1.44176 SRR1035978 13 hpf rx3-/- 1.37398 SRR1562531 muscle normal 1.307 SRR891512 blood normal 1.29207 SRR630463 5 dpf normal 1.28976 SRR1004788 larvae impdh1b morpholino 1.2453 SRR749515 24 hpf eif3ha morphant 1.20046 SRR592701 pineal gland normal 1.1944299999999999 SRR1342217 embryo infection with Mycobacterium marinum 1.1561 SRR535890 larvae normal 1.1377700000000002 ERR023145 heart normal 1.1351 SRR610742 3 dpf express NICD 1.12653 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.11775 SRR535851 larvae normal 1.0986799999999999 SRR535847 larvae normal 1.09496 SRR797914 embryo pbx2/4-MO 1.09217 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.09029 SRR1004786 larvae control morpholino 1.08213 SRR1104059 heart kctd10 mut 1.06176 SRR516135 skin male and 5 month 0.984118 SRR535849 larvae normal 0.978269 SRR516124 skin male and 3.5 year 0.9741620000000001 SRR1188148 embryo Control PBS 0.5 hpi 0.930797 SRR776509 embryo Salmonella infected 0.9189620000000001 SRR1104058 heart normal 0.9166340000000001 SRR1291417 5 dpi injected marinum 0.913653 SRR1028003 head normal 0.895966 SRR535852 larvae hoxb1b mut 0.8791770000000001 SRR535943 larvae vangl mut 0.86536 SRR610740 3 dpf normal 0.8503219999999999 SRR797908 embryo normal 0.810227 SRR535926 larvae normal 0.790248 SRR1167762 embryo ptpn6 morpholino 0.747016 SRR1167753 embryo bacterial infection 0.741313 SRR1523214 embryo glut12 morpholino 0.7377100000000001 SRR535848 larvae hoxb1b mut 0.697034 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.676912 SRR527833 5 dpf normal 0.661987 SRR610741 3 dpf express Ras 0.651284 SRR065197 3 dpf U1C knockout 0.645378 SRR1188156 embryo Control PBS 4 hpi 0.641788 SRR831692 embryo normal 0.624541 SRR535850 larvae hoxb1b mut 0.621636 SRR1708343 embryo MUTAS 0.5748449999999999 SRR1291414 5 dpi normal 0.568584 SRR1167756 embryo mpeg1 morpholino 0.537859 SRR527832 16-36 hpf normal 0.5297729999999999 SRR065196 3 dpf normal 0.504182 SRR038624 embryo traf6 morpholino and bacterial infection 0.474092 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.47086999999999996 SRR514028 retina control morpholino 0.461739 SRR1004787 larvae impdh1a morpholino 0.448578 SRR1004789 larvae impdh2 morpholino 0.446719 SRR1534350 larvae 5 ug/l BDE47 treatment 0.443208 SRR535913 larvae krox mut 0.398675 SRR1021215 sphere stage Mzeomesa 0.392585 SRR797911 embryo prdm1-/- 0.386944 SRR592698 pineal gland normal 0.386022 SRR633516 larvae normal 0.371003 SRR1048061 pineal gland dark 0.36828099999999997 SRR1021213 sphere stage normal 0.339602 SRR726542 5 dpf infection with control 0.32243299999999997 SRR776507 embryo normal 0.31254299999999996 SRR776508 embryo miR-146 knockdown 0.309415 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.28767 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.286634 SRR1188160 embryo Insulin 4 hpi 0.282573 SRR038626 embryo control morpholino and bacterial infection 0.281889 SRR519752 7 dpf VD3 treatment 0.274918 SRR749514 24 hpf normal 0.27375 SRR519727 6 dpf FETOH treatment 0.264075 SRR519742 4 dpf VD3 treatment 0.26261999999999996 SRR726541 5 dpf infection with Mycobacterium marinum 0.257054 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.242157 SRR519737 2 dpf VD3 treatment 0.22862800000000003 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.22825399999999998 SRR801555 embryo RPS19 morpholino 0.22317399999999998 SRR1035237 liver transgenic UHRF1 0.21864299999999998 SRR519732 7 dpf FETOH treatment 0.21680700000000003 SRR1005530 embryo RPL11 morpholino 0.21163200000000001 SRR1188152 embryo Insulin 0.5 hpi 0.21011 SRR1534349 larvae DMSO vehicle 0.20755 SRR594771 endothelium normal 0.207352 SRR519747 6 dpf VD3 treatment 0.205288 SRR700537 heart Gata4 morpholino 0.202427 SRR592699 pineal gland normal 0.202211 SRR038625 embryo traf6 morpholino 0.201531 SRR519722 4 dpf FETOH treatment 0.194235 SRR592702 pineal gland normal 0.167246 SRR658545 6 somite Gata6 morphant 0.16631400000000002 SRR633544 larvae exposed to cold stress 0.159407 SRR1048059 pineal gland light 0.159046 SRR1039571 gastrointestinal diet 0.1 NPM 0.15762 SRR633550 larvae exposed to hypoxia stress 0.150529 SRR592700 pineal gland normal 0.150281 SRR1534351 larvae 500 ug/l BDE47 treatment 0.148151 SRR1205154 5dpf transgenic sqET20 0.14519200000000002 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.14231400000000002 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.136197 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.134936 SRR519717 2 dpf FETOH treatment 0.129457 SRR942769 embryo myd88+/+ 0.123528 SRR1569495 embryo normal 0.12092699999999999 SRR658537 bud Gata6 morphant 0.119501 SRR726540 5 dpf normal 0.11348 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.111641 SRR1039573 gastrointestinal diet 0.75 NPM 0.10776 SRR594769 blood normal 0.10456199999999999 SRR1562533 testis normal 0.104144 SRR658541 6 somite normal 0.103742 ERR023144 brain normal 0.102005 ERR023143 swim bladder normal 0.09582539999999999 SRR891495 heart normal 0.0888705 SRR891511 brain normal 0.0824518 SRR527835 tail normal 0.0747357 SRR038627 embryo control morpholino 0.050368 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.046504699999999996 SRR1565815 brain normal 0.0453384 SRR658543 6 somite Gata5 morphan 0.0439133 SRR1004785 larvae normal 0.0427074 SRR800046 sphere stage 5azaCyD treatment 0.0419 SRR800049 sphere stage control treatment 0.0331004 SRR1565819 brain normal 0.0265736 SRR1565807 brain normal 0.019558900000000004 ERR594416 retina transgenic flk1 0.015542400000000001 SRR1565805 brain normal 0.015279399999999999 SRR1565813 brain normal 0.013005200000000001 ERR594418 retina transgenic flk1 and develop tumors 0.012323 SRR1648856 brain normal 0.00656788 SRR1565817 brain normal 0.00393282 SRR1565809 brain normal 0.00338138 SRR1565811 brain normal 0.00220308 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.24674e-06 SRR1569491 embryo normal 1.4381100000000001e-06 SRR700534 heart control morpholino 1.20416e-06 SRR1647680 head kidney SVCV treatment 4.59172e-07