sample tissue condition fpkm SRR800043 sphere stage normal 85.449 SRR800049 sphere stage control treatment 40.9694 SRR800045 muscle normal 35.2247 SRR800046 sphere stage 5azaCyD treatment 30.8977 SRR1205160 5dpf transgenic sqET20 and GFP+ 16.5069 ERR023146 head kidney normal 15.0613 SRR1035239 liver transgenic mCherry control 12.6341 ERR023145 heart normal 12.3749 SRR516126 skin male and 5 month 11.886 SRR592703 pineal gland normal 11.5557 ERR023144 brain normal 11.2114 SRR516131 skin male and 5 month 10.6267 SRR1205154 5dpf transgenic sqET20 9.92935 SRR1647680 head kidney SVCV treatment 9.71468 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 9.35619 ERR023143 swim bladder normal 9.00489 SRR1534350 larvae 5 ug/l BDE47 treatment 8.02812 SRR1534351 larvae 500 ug/l BDE47 treatment 8.02474 SRR748488 sperm normal 7.9345300000000005 SRR1647681 head kidney SVCV treatment 7.67853 SRR065196 3 dpf normal 6.915939999999999 SRR372802 5 dpf normal 6.86477 SRR1647682 spleen normal 6.73035 SRR1534349 larvae DMSO vehicle 6.668660000000001 SRR801556 embryo RPS19 and p53 morpholino 5.73074 SRR1005530 embryo RPL11 morpholino 5.707330000000001 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 5.6523900000000005 SRR516132 skin male and 5 month 5.64425 SRR1562533 testis normal 5.4035 SRR516128 skin male and 5 month 5.38121 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 5.37496 SRR516123 skin male and 3.5 year 5.25444 SRR1647679 head kidney normal 4.90345 SRR610741 3 dpf express Ras 4.82915 SRR1035237 liver transgenic UHRF1 4.72979 SRR630463 5 dpf normal 4.72541 SRR630464 5 dpf injected epidermidis 4.6919900000000005 SRR1291417 5 dpi injected marinum 4.499 ERR594417 retina normal 4.38618 SRR1004785 larvae normal 4.35545 SRR891510 muscle normal 4.31018 SRR726540 5 dpf normal 4.23875 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 4.1536599999999995 SRR1048059 pineal gland light 4.0570900000000005 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 4.004980000000001 SRR1299124 caudal fin Zero day time after treatment 3.98982 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.98096 SRR1562532 spleen normal 3.94046 SRR065197 3 dpf U1C knockout 3.86444 SRR1299127 caudal fin Two days time after treatment 3.8636 SRR1004789 larvae impdh2 morpholino 3.71728 SRR1028004 head normal 3.71406 SRR535848 larvae hoxb1b mut 3.56275 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.54566 SRR038627 embryo control morpholino 3.53769 SRR891495 heart normal 3.53767 SRR1039573 gastrointestinal diet 0.75 NPM 3.46388 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 3.4085699999999997 SRR1028002 head normal 3.39415 SRR1565815 brain normal 3.3784300000000003 SRR1648856 brain normal 3.3454 SRR1005529 embryo control morpholino 3.3442800000000004 SRR801554 embryo control morpholino 3.33941 SRR1299129 caudal fin Seven days time after treatment 3.2581599999999997 SRR514028 retina control morpholino 3.24401 SRR1039571 gastrointestinal diet 0.1 NPM 3.23822 SRR891511 brain normal 3.2218299999999997 SRR633516 larvae normal 3.1221200000000002 SRR1004787 larvae impdh1a morpholino 3.11443 SRR592701 pineal gland normal 3.09783 SRR535847 larvae normal 3.08736 SRR516127 skin male and 5 month 3.06426 SRR535978 larvae normal 3.06121 SRR038626 embryo control morpholino and bacterial infection 3.0373 SRR610740 3 dpf normal 3.01369 SRR1299125 caudal fin Half day time after treatment 2.9769 SRR516134 skin male and 5 month 2.93851 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.90187 SRR1569491 embryo normal 2.8940599999999996 ERR594416 retina transgenic flk1 2.8665700000000003 SRR1299126 caudal fin One day time after treatment 2.7356700000000003 SRR1299128 caudal fin Three days time after treatment 2.6725 SRR1004786 larvae control morpholino 2.64388 SRR1562528 eye normal 2.6079 SRR1647683 spleen SVCV treatment 2.56278 SRR527833 5 dpf normal 2.55782 SRR592698 pineal gland normal 2.53523 SRR1562530 liver normal 2.53008 SRR1028003 head normal 2.49994 SRR527840 24hpf normal 2.4811799999999997 SRR1167753 embryo bacterial infection 2.4701299999999997 SRR1648855 brain normal 2.4171099999999996 SRR1565813 brain normal 2.3954299999999997 SRR516129 skin male and 5 month 2.38786 SRR1562529 intestine and pancreas normal 2.36142 SRR1167756 embryo mpeg1 morpholino 2.34902 ERR594418 retina transgenic flk1 and develop tumors 2.33256 SRR1647684 spleen SVCV treatment 2.2869 SRR957180 heart 7 days after heart tip amputation 2.26421 SRR372798 28 hpf normal 2.26031 SRR516135 skin male and 5 month 2.25375 SRR516124 skin male and 3.5 year 2.23714 SRR658545 6 somite Gata6 morphant 2.23475 SRR535851 larvae normal 2.22932 SRR776508 embryo miR-146 knockdown 2.21868 SRR1167752 embryo normal 2.20247 SRR1562531 muscle normal 2.18749 SRR1291414 5 dpi normal 2.17285 SRR594769 blood normal 2.1219799999999998 SRR726541 5 dpf infection with Mycobacterium marinum 2.08415 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.0821 SRR516130 skin male and 5 month 2.065 SRR1342218 embryo marco morpholino 2.0630900000000003 SRR633550 larvae exposed to hypoxia stress 2.05315 SRR801555 embryo RPS19 morpholino 2.0352200000000003 SRR519732 7 dpf FETOH treatment 1.98721 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.98153 SRR1523211 embryo control morpholino 1.97505 SRR1004788 larvae impdh1b morpholino 1.95419 SRR749514 24 hpf normal 1.9327599999999998 SRR1188160 embryo Insulin 4 hpi 1.92307 SRR038624 embryo traf6 morpholino and bacterial infection 1.9219400000000002 SRR1648854 brain normal 1.902 SRR1188152 embryo Insulin 0.5 hpi 1.8929099999999999 SRR891504 liver normal 1.8882 SRR519752 7 dpf VD3 treatment 1.87851 SRR1565809 brain normal 1.8753900000000001 SRR1565811 brain normal 1.85476 SRR610742 3 dpf express NICD 1.84277 SRR1565817 brain normal 1.8111700000000002 SRR535849 larvae normal 1.8076 SRR516133 skin male and 5 month 1.7784799999999998 SRR535852 larvae hoxb1b mut 1.77712 SRR1565819 brain normal 1.7730599999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.75761 SRR941749 anterior pectoral fin normal 1.7455200000000002 SRR1569495 embryo normal 1.74357 SRR516122 skin male and 3.5 year 1.71006 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.70205 SRR514030 retina id2a morpholino 1.67655 SRR592699 pineal gland normal 1.66572 SRR1342216 embryo norml 1.6615400000000002 SRR658541 6 somite normal 1.60015 SRR592700 pineal gland normal 1.58008 SRR372796 bud normal 1.57234 SRR535850 larvae hoxb1b mut 1.52756 SRR1342217 embryo infection with Mycobacterium marinum 1.52567 SRR535926 larvae normal 1.51531 SRR516121 skin male and 3.5 year 1.51314 SRR516125 skin male and 3.5 year 1.5100200000000001 SRR957181 heart normal 1.5081 SRR535986 larvae nhsl1b mut 1.50217 SRR797908 embryo normal 1.48663 SRR1565805 brain normal 1.4834 SRR1188148 embryo Control PBS 0.5 hpi 1.47462 SRR527835 tail normal 1.46541 SRR700537 heart Gata4 morpholino 1.46305 SRR1188156 embryo Control PBS 4 hpi 1.4495 SRR942769 embryo myd88+/+ 1.44488 SRR1523214 embryo glut12 morpholino 1.4293 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.42045 SRR527844 24hpf normal 1.40578 SRR1167762 embryo ptpn6 morpholino 1.39836 SRR527836 24hpf normal 1.3902299999999999 SRR658535 bud Gata5 morphant 1.36218 SRR633544 larvae exposed to cold stress 1.3594 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.3351899999999999 SRR1048061 pineal gland dark 1.30179 SRR726542 5 dpf infection with control 1.27163 SRR800037 egg normal 1.25345 SRR372800 2 dpf normal 1.24453 SRR1708346 embryo SIBPS 1.21886 SRR658539 bud Gata5/6 morphant 1.1976799999999999 SRR797914 embryo pbx2/4-MO 1.16798 SRR519727 6 dpf FETOH treatment 1.15754 SRR592702 pineal gland normal 1.1460299999999999 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.14396 SRR941753 posterior pectoral fin normal 1.14031 SRR527832 16-36 hpf normal 1.1303 SRR776507 embryo normal 1.1228200000000002 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.10801 SRR658543 6 somite Gata5 morphan 1.10295 SRR1708345 embryo SIBAS 0.946666 SRR1035978 13 hpf rx3-/- 0.921544 SRR749515 24 hpf eif3ha morphant 0.9146920000000001 SRR658547 6 somite Gata5/6 morphant 0.8947280000000001 SRR942764 embryo myd88-/- 0.886805 SRR519747 6 dpf VD3 treatment 0.8821700000000001 SRR700534 heart control morpholino 0.8589690000000001 SRR594771 endothelium normal 0.851022 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.835045 SRR1621206 embryo normal 0.834002 SRR1104059 heart kctd10 mut 0.8295799999999999 SRR535913 larvae krox mut 0.806383 SRR519722 4 dpf FETOH treatment 0.800689 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.7862180000000001 SRR527834 head normal 0.782461 SRR038625 embryo traf6 morpholino 0.7810560000000001 SRR1708344 embryo MUTPS 0.762767 SRR797911 embryo prdm1-/- 0.750421 SRR1708343 embryo MUTAS 0.748 SRR1565807 brain normal 0.731521 SRR372793 shield normal 0.643216 SRR1049814 256 cell normal 0.635925 SRR519717 2 dpf FETOH treatment 0.61164 SRR658537 bud Gata6 morphant 0.6012770000000001 SRR1104058 heart normal 0.5972970000000001 SRR519742 4 dpf VD3 treatment 0.594282 SRR1035984 13 hpf normal 0.574597 SRR748491 germ ring normal 0.56866 SRR535943 larvae vangl mut 0.530274 SRR519737 2 dpf VD3 treatment 0.49922799999999995 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.48092299999999993 SRR776509 embryo Salmonella infected 0.46581300000000003 SRR372787 2-4 cell normal 0.45638599999999996 SRR535890 larvae normal 0.437881 SRR372791 dome normal 0.42863 SRR658533 bud normal 0.409161 SRR891512 blood normal 0.36702399999999996 SRR831692 embryo normal 0.338729 SRR748489 egg normal 0.30840100000000004 SRR1021215 sphere stage Mzeomesa 0.236884 SRR748490 1 kcell normal 0.23073200000000002 SRR372789 1K cell normal 0.206039 SRR1021213 sphere stage normal 0.196762 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.122398 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.08994500000000001 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.014812299999999999