sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 91.0191 SRR1647679 head kidney normal 82.1183 SRR1299129 caudal fin Seven days time after treatment 60.1054 SRR1205160 5dpf transgenic sqET20 and GFP+ 58.8724 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 56.3543 SRR941749 anterior pectoral fin normal 51.3018 ERR023144 brain normal 50.6235 SRR1647680 head kidney SVCV treatment 50.1926 SRR1299125 caudal fin Half day time after treatment 48.2226 SRR941753 posterior pectoral fin normal 47.9571 SRR1647682 spleen normal 46.9546 SRR1647683 spleen SVCV treatment 43.7788 SRR1647681 head kidney SVCV treatment 41.3854 SRR1299126 caudal fin One day time after treatment 40.4433 SRR1562528 eye normal 36.3794 ERR594417 retina normal 34.8866 ERR023143 swim bladder normal 33.7203 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 32.7576 SRR1299128 caudal fin Three days time after treatment 32.2275 SRR1299127 caudal fin Two days time after treatment 31.2656 SRR527834 head normal 30.8252 SRR1562532 spleen normal 30.61 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 29.0544 SRR592703 pineal gland normal 29.0454 SRR592701 pineal gland normal 27.2542 SRR630464 5 dpf injected epidermidis 26.7423 SRR592702 pineal gland normal 26.4465 ERR594416 retina transgenic flk1 25.8601 SRR630463 5 dpf normal 25.7726 SRR1048061 pineal gland dark 25.2575 SRR592698 pineal gland normal 25.1928 SRR1205154 5dpf transgenic sqET20 24.9005 SRR1291417 5 dpi injected marinum 24.8317 SRR1291414 5 dpi normal 24.5892 ERR023146 head kidney normal 24.1561 SRR516125 skin male and 3.5 year 23.7729 SRR516124 skin male and 3.5 year 23.2724 SRR592700 pineal gland normal 23.0225 SRR1647684 spleen SVCV treatment 22.2271 SRR535849 larvae normal 21.5239 SRR516129 skin male and 5 month 21.4854 SRR516135 skin male and 5 month 21.4249 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 20.9018 SRR1188156 embryo Control PBS 4 hpi 20.6709 SRR516122 skin male and 3.5 year 20.6448 SRR519732 7 dpf FETOH treatment 20.1116 SRR891511 brain normal 19.9339 SRR1562531 muscle normal 18.7969 SRR516123 skin male and 3.5 year 18.7049 SRR1188160 embryo Insulin 4 hpi 18.496 SRR592699 pineal gland normal 18.0575 SRR1167757 embryo mpeg1 morpholino and bacterial infection 18.0188 SRR1167752 embryo normal 17.8857 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 17.281 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 17.1835 SRR1167756 embryo mpeg1 morpholino 16.7543 SRR535852 larvae hoxb1b mut 16.5816 SRR1523214 embryo glut12 morpholino 16.5551 SRR535851 larvae normal 16.5425 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 16.5235 SRR957181 heart normal 16.5046 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 16.3372 SRR726541 5 dpf infection with Mycobacterium marinum 16.1107 SRR516133 skin male and 5 month 15.994000000000002 SRR1028002 head normal 15.7606 SRR1048059 pineal gland light 15.7095 SRR519727 6 dpf FETOH treatment 15.5258 SRR516130 skin male and 5 month 15.4948 SRR1534350 larvae 5 ug/l BDE47 treatment 15.1988 SRR1167753 embryo bacterial infection 15.0197 SRR1562529 intestine and pancreas normal 14.7531 SRR516127 skin male and 5 month 14.704 SRR1534349 larvae DMSO vehicle 14.6578 SRR1534351 larvae 500 ug/l BDE47 treatment 14.6491 SRR1342216 embryo norml 14.5035 SRR942764 embryo myd88-/- 14.4848 SRR516128 skin male and 5 month 14.445 SRR535850 larvae hoxb1b mut 14.3561 SRR1188148 embryo Control PBS 0.5 hpi 14.103 SRR535847 larvae normal 14.0363 SRR1188152 embryo Insulin 0.5 hpi 13.7734 SRR516121 skin male and 3.5 year 13.6715 SRR942769 embryo myd88+/+ 13.6448 SRR1167763 embryo ptpn6 morpholino and bacterial infection 13.339 SRR519747 6 dpf VD3 treatment 13.0816 SRR065197 3 dpf U1C knockout 13.0786 SRR1562533 testis normal 13.0056 SRR610741 3 dpf express Ras 12.9846 SRR1562530 liver normal 12.9041 SRR1648855 brain normal 12.8649 SRR516134 skin male and 5 month 12.7696 SRR516126 skin male and 5 month 12.7331 SRR957180 heart 7 days after heart tip amputation 12.6916 SRR519752 7 dpf VD3 treatment 12.5586 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 12.558 SRR726542 5 dpf infection with control 12.4734 SRR1523211 embryo control morpholino 12.0597 SRR535848 larvae hoxb1b mut 11.9914 SRR065196 3 dpf normal 11.5324 SRR1565809 brain normal 11.3287 SRR726540 5 dpf normal 11.2864 SRR1028004 head normal 11.2464 SRR831692 embryo normal 10.7472 SRR1565811 brain normal 10.2463 SRR891495 heart normal 10.1854 SRR633550 larvae exposed to hypoxia stress 9.98758 SRR1342218 embryo marco morpholino 9.71476 SRR519722 4 dpf FETOH treatment 9.53531 SRR1028003 head normal 9.237739999999999 SRR516131 skin male and 5 month 9.22023 SRR516132 skin male and 5 month 9.111930000000001 SRR610742 3 dpf express NICD 8.91736 ERR594418 retina transgenic flk1 and develop tumors 8.76648 SRR891510 muscle normal 8.75234 SRR1342217 embryo infection with Mycobacterium marinum 8.3839 SRR527833 5 dpf normal 8.35084 SRR633516 larvae normal 8.20513 SRR1167762 embryo ptpn6 morpholino 8.07898 SRR776509 embryo Salmonella infected 7.90044 SRR519742 4 dpf VD3 treatment 7.549930000000001 SRR519737 2 dpf VD3 treatment 7.011880000000001 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 6.98797 SRR776507 embryo normal 6.9337800000000005 SRR1104058 heart normal 6.8687 SRR1648854 brain normal 6.72198 SRR1035239 liver transgenic mCherry control 6.7096 SRR594771 endothelium normal 6.6272199999999994 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 6.59921 SRR610740 3 dpf normal 6.59444 SRR1565817 brain normal 6.56428 ERR023145 heart normal 6.40066 SRR535943 larvae vangl mut 6.29801 SRR633544 larvae exposed to cold stress 6.2937199999999995 SRR519717 2 dpf FETOH treatment 6.05579 SRR1565805 brain normal 5.92929 SRR1565819 brain normal 5.757219999999999 SRR1039571 gastrointestinal diet 0.1 NPM 5.7407699999999995 SRR776510 embryo Salmonella infected and miR-146 knockdown 5.35888 SRR1104059 heart kctd10 mut 5.20653 SRR776508 embryo miR-146 knockdown 5.13428 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 5.12869 SRR038627 embryo control morpholino 5.10721 SRR038626 embryo control morpholino and bacterial infection 4.96082 SRR535926 larvae normal 4.96061 SRR1565815 brain normal 4.90506 SRR1565807 brain normal 4.88731 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 4.8686 SRR700537 heart Gata4 morpholino 4.7051300000000005 SRR535913 larvae krox mut 4.65131 SRR797911 embryo prdm1-/- 4.55956 SRR535890 larvae normal 4.47268 SRR372800 2 dpf normal 4.315980000000001 SRR797917 embryo pbx2/4-MO and prdm1-/- 4.2801599999999995 SRR1565813 brain normal 4.2291099999999995 SRR594769 blood normal 4.16458 SRR038624 embryo traf6 morpholino and bacterial infection 4.14685 SRR797914 embryo pbx2/4-MO 4.08409 SRR1035237 liver transgenic UHRF1 3.96823 SRR1039573 gastrointestinal diet 0.75 NPM 3.9119300000000004 SRR372798 28 hpf normal 3.59576 SRR749514 24 hpf normal 3.5607699999999998 SRR514028 retina control morpholino 3.4174900000000004 SRR891504 liver normal 3.38155 SRR797908 embryo normal 3.3493199999999996 SRR038625 embryo traf6 morpholino 3.24525 SRR700534 heart control morpholino 3.1610400000000003 SRR749515 24 hpf eif3ha morphant 3.07891 SRR1708343 embryo MUTAS 2.97486 SRR658545 6 somite Gata6 morphant 2.95412 SRR1004789 larvae impdh2 morpholino 2.94026 SRR658541 6 somite normal 2.83006 SRR535986 larvae nhsl1b mut 2.7765299999999997 SRR658543 6 somite Gata5 morphan 2.40607 SRR891512 blood normal 2.34669 SRR527835 tail normal 2.34285 SRR372802 5 dpf normal 2.31554 SRR658547 6 somite Gata5/6 morphant 2.2545900000000003 SRR1708346 embryo SIBPS 2.24408 SRR514030 retina id2a morpholino 2.02699 SRR527840 24hpf normal 2.01963 SRR658535 bud Gata5 morphant 1.8775400000000002 SRR535978 larvae normal 1.69045 SRR1004788 larvae impdh1b morpholino 1.6523299999999999 SRR527832 16-36 hpf normal 1.64497 SRR658533 bud normal 1.5986200000000002 SRR658539 bud Gata5/6 morphant 1.45258 SRR800045 muscle normal 1.43434 SRR527836 24hpf normal 1.37826 SRR658537 bud Gata6 morphant 1.35776 SRR1569495 embryo normal 1.2323 SRR372796 bud normal 1.2029299999999998 SRR1708345 embryo SIBAS 1.09762 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.09604 SRR1708344 embryo MUTPS 1.05777 SRR748488 sperm normal 1.04502 SRR1004786 larvae control morpholino 0.9840760000000001 SRR1035978 13 hpf rx3-/- 0.908791 SRR1004787 larvae impdh1a morpholino 0.8925700000000001 SRR372793 shield normal 0.522536 SRR527844 24hpf normal 0.520969 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.442434 SRR1648856 brain normal 0.42208100000000004 SRR1005530 embryo RPL11 morpholino 0.186643 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.140652 SRR748491 germ ring normal 0.130166 SRR1569491 embryo normal 0.07613049999999999 SRR372787 2-4 cell normal 0.0506305 SRR1021213 sphere stage normal 0.0369436 SRR372789 1K cell normal 0.036748199999999995 SRR372791 dome normal 0.024344799999999996 SRR800037 egg normal 0.0162377 SRR1004785 larvae normal 0.00407261 SRR1621206 embryo normal 0.00179872 SRR748490 1 kcell normal 3.7756900000000003e-06