sample tissue condition fpkm SRR1299125 caudal fin Half day time after treatment 158.679 SRR1299126 caudal fin One day time after treatment 110.184 SRR1299124 caudal fin Zero day time after treatment 105.601 SRR1299127 caudal fin Two days time after treatment 99.8885 SRR1299129 caudal fin Seven days time after treatment 75.467 SRR1299128 caudal fin Three days time after treatment 72.3056 SRR516128 skin male and 5 month 71.9679 SRR941749 anterior pectoral fin normal 62.4352 SRR516124 skin male and 3.5 year 61.1994 SRR516123 skin male and 3.5 year 56.3548 SRR516121 skin male and 3.5 year 54.8468 SRR516126 skin male and 5 month 49.5599 SRR941753 posterior pectoral fin normal 47.893 SRR516125 skin male and 3.5 year 43.6056 SRR516133 skin male and 5 month 43.4822 SRR516129 skin male and 5 month 40.3411 SRR516132 skin male and 5 month 39.6865 SRR516131 skin male and 5 month 36.9175 SRR891512 blood normal 36.277 SRR516122 skin male and 3.5 year 35.7251 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 35.4501 SRR516135 skin male and 5 month 35.4492 SRR516134 skin male and 5 month 26.0739 SRR1562528 eye normal 24.5292 SRR516127 skin male and 5 month 22.1258 SRR516130 skin male and 5 month 15.5871 ERR023146 head kidney normal 13.5421 ERR023143 swim bladder normal 13.0867 ERR023145 heart normal 12.2796 SRR1167763 embryo ptpn6 morpholino and bacterial infection 10.7876 SRR1647684 spleen SVCV treatment 10.091000000000001 SRR1562531 muscle normal 9.49802 SRR1647683 spleen SVCV treatment 9.36773 SRR1291417 5 dpi injected marinum 9.16257 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 8.96165 SRR1205160 5dpf transgenic sqET20 and GFP+ 7.1729 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 6.75206 SRR1562529 intestine and pancreas normal 6.730989999999999 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 6.46876 SRR1562532 spleen normal 6.14577 SRR1647682 spleen normal 5.81806 SRR527834 head normal 5.6923900000000005 SRR1167757 embryo mpeg1 morpholino and bacterial infection 5.60026 SRR1562533 testis normal 4.8625 SRR1188156 embryo Control PBS 4 hpi 4.73926 SRR776510 embryo Salmonella infected and miR-146 knockdown 3.87305 SRR1167753 embryo bacterial infection 3.8635699999999997 SRR1534351 larvae 500 ug/l BDE47 treatment 3.4557599999999997 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.3196800000000004 SRR592699 pineal gland normal 3.22324 SRR1708346 embryo SIBPS 3.0174 SRR630464 5 dpf injected epidermidis 3.00487 SRR1708344 embryo MUTPS 2.89747 SRR1167762 embryo ptpn6 morpholino 2.81922 SRR1708345 embryo SIBAS 2.75882 SRR1167756 embryo mpeg1 morpholino 2.7035400000000003 SRR038626 embryo control morpholino and bacterial infection 2.64178 SRR527836 24hpf normal 2.42814 SRR1342218 embryo marco morpholino 2.42597 ERR594418 retina transgenic flk1 and develop tumors 2.3935400000000002 SRR592698 pineal gland normal 2.34998 SRR1647680 head kidney SVCV treatment 2.28939 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 2.21636 SRR519752 7 dpf VD3 treatment 2.19294 SRR776509 embryo Salmonella infected 2.15633 SRR592703 pineal gland normal 2.1488 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 2.05186 SRR1648856 brain normal 1.9990400000000002 SRR527835 tail normal 1.8903299999999998 SRR527844 24hpf normal 1.87563 SRR592701 pineal gland normal 1.86517 SRR610741 3 dpf express Ras 1.8519700000000001 SRR527840 24hpf normal 1.8495599999999999 SRR630463 5 dpf normal 1.8447799999999999 SRR633516 larvae normal 1.82883 SRR776508 embryo miR-146 knockdown 1.8231 ERR594416 retina transgenic flk1 1.82267 SRR748489 egg normal 1.80295 SRR610742 3 dpf express NICD 1.79338 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.7902 SRR1534349 larvae DMSO vehicle 1.7253 SRR1028004 head normal 1.72292 SRR1039571 gastrointestinal diet 0.1 NPM 1.68665 SRR519747 6 dpf VD3 treatment 1.6441599999999998 SRR038624 embryo traf6 morpholino and bacterial infection 1.62083 SRR1167752 embryo normal 1.60938 SRR1648854 brain normal 1.5985 SRR776507 embryo normal 1.5975 SRR1648855 brain normal 1.5901 SRR1534350 larvae 5 ug/l BDE47 treatment 1.5788 SRR1188148 embryo Control PBS 0.5 hpi 1.5656700000000001 SRR1647679 head kidney normal 1.55244 SRR1647681 head kidney SVCV treatment 1.50981 SRR1205154 5dpf transgenic sqET20 1.50714 SRR065197 3 dpf U1C knockout 1.49725 SRR633550 larvae exposed to hypoxia stress 1.48557 SRR1028003 head normal 1.47566 SRR1004786 larvae control morpholino 1.47541 SRR1004785 larvae normal 1.4652 SRR1188152 embryo Insulin 0.5 hpi 1.41608 SRR1342217 embryo infection with Mycobacterium marinum 1.40777 SRR1291414 5 dpi normal 1.39458 SRR726542 5 dpf infection with control 1.39435 SRR1028002 head normal 1.39385 SRR1708343 embryo MUTAS 1.38622 SRR1004787 larvae impdh1a morpholino 1.3845100000000001 SRR726540 5 dpf normal 1.36951 SRR592700 pineal gland normal 1.36715 SRR1569495 embryo normal 1.3423 SRR519742 4 dpf VD3 treatment 1.3253 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.32416 SRR594771 endothelium normal 1.31156 SRR519722 4 dpf FETOH treatment 1.27652 SRR372802 5 dpf normal 1.27124 SRR633544 larvae exposed to cold stress 1.25052 SRR519732 7 dpf FETOH treatment 1.21327 SRR891495 heart normal 1.18859 SRR592702 pineal gland normal 1.15519 SRR519727 6 dpf FETOH treatment 1.13806 SRR535943 larvae vangl mut 1.13228 SRR1005530 embryo RPL11 morpholino 1.12626 SRR1188160 embryo Insulin 4 hpi 1.1125 SRR1004788 larvae impdh1b morpholino 1.10513 SRR372798 28 hpf normal 1.0924 SRR372800 2 dpf normal 1.08766 SRR610740 3 dpf normal 1.08334 SRR1565805 brain normal 1.07934 SRR749515 24 hpf eif3ha morphant 1.0608899999999999 SRR726541 5 dpf infection with Mycobacterium marinum 1.05301 SRR1565813 brain normal 1.0443 SRR942764 embryo myd88-/- 1.00501 SRR1523214 embryo glut12 morpholino 1.0024600000000001 SRR519717 2 dpf FETOH treatment 0.9846940000000001 SRR1021215 sphere stage Mzeomesa 0.979988 SRR519737 2 dpf VD3 treatment 0.9796040000000001 SRR1523211 embryo control morpholino 0.9770840000000001 SRR800045 muscle normal 0.96473 SRR1342216 embryo norml 0.95489 SRR801556 embryo RPS19 and p53 morpholino 0.952556 SRR535978 larvae normal 0.946458 SRR1048061 pineal gland dark 0.9183600000000001 SRR1569491 embryo normal 0.900056 SRR535986 larvae nhsl1b mut 0.8802110000000001 SRR535926 larvae normal 0.867663 SRR1565815 brain normal 0.861842 SRR1562530 liver normal 0.8497600000000001 SRR535848 larvae hoxb1b mut 0.8370190000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.8364530000000001 SRR957180 heart 7 days after heart tip amputation 0.829808 SRR535852 larvae hoxb1b mut 0.798602 SRR527833 5 dpf normal 0.779388 SRR535890 larvae normal 0.766401 SRR1565817 brain normal 0.763841 SRR891510 muscle normal 0.745682 SRR1104059 heart kctd10 mut 0.7452770000000001 SRR535913 larvae krox mut 0.7360399999999999 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.716683 SRR942769 embryo myd88+/+ 0.712851 SRR1104058 heart normal 0.705811 SRR1565807 brain normal 0.6822699999999999 SRR700537 heart Gata4 morpholino 0.6798 SRR801555 embryo RPS19 morpholino 0.676977 SRR749514 24 hpf normal 0.672471 SRR535851 larvae normal 0.653308 SRR535847 larvae normal 0.636848 SRR1565819 brain normal 0.635568 SRR1039573 gastrointestinal diet 0.75 NPM 0.609961 ERR023144 brain normal 0.60487 ERR594417 retina normal 0.577764 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.556407 SRR748488 sperm normal 0.523597 SRR831692 embryo normal 0.5209199999999999 SRR1565809 brain normal 0.500442 SRR700534 heart control morpholino 0.46506800000000004 SRR1035237 liver transgenic UHRF1 0.45296499999999995 SRR527832 16-36 hpf normal 0.451664 SRR1565811 brain normal 0.446198 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.42239399999999994 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.41486300000000004 SRR514028 retina control morpholino 0.413499 SRR535849 larvae normal 0.397837 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.39204 SRR891511 brain normal 0.374909 SRR535850 larvae hoxb1b mut 0.35684299999999997 SRR594769 blood normal 0.350591 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.335158 SRR797914 embryo pbx2/4-MO 0.321127 SRR038627 embryo control morpholino 0.30954699999999996 SRR891504 liver normal 0.294195 SRR1005529 embryo control morpholino 0.283373 SRR801554 embryo control morpholino 0.283011 SRR038625 embryo traf6 morpholino 0.280932 SRR797908 embryo normal 0.269625 SRR797911 embryo prdm1-/- 0.211193 SRR800049 sphere stage control treatment 0.20388699999999998 SRR372793 shield normal 0.147403 SRR658545 6 somite Gata6 morphant 0.145727 SRR957181 heart normal 0.14548599999999998 SRR1004789 larvae impdh2 morpholino 0.13789200000000001 SRR065196 3 dpf normal 0.13476400000000002 SRR514030 retina id2a morpholino 0.12434 SRR658547 6 somite Gata5/6 morphant 0.12110599999999999 SRR372791 dome normal 0.12023199999999999 SRR1035984 13 hpf normal 0.11480699999999999 SRR1021213 sphere stage normal 0.10618399999999999 SRR372796 bud normal 0.10325999999999999 SRR658541 6 somite normal 0.101951 SRR658543 6 somite Gata5 morphan 0.100312 SRR658539 bud Gata5/6 morphant 0.0848607 SRR800037 egg normal 0.07732339999999999 SRR1035978 13 hpf rx3-/- 0.0727342 SRR658533 bud normal 0.071974 SRR658537 bud Gata6 morphant 0.0701445 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.0540137 SRR800043 sphere stage normal 0.0514405 SRR748491 germ ring normal 0.0480694 SRR658535 bud Gata5 morphant 0.0374819 SRR1621206 embryo normal 0.0248476 SRR1049814 256 cell normal 0.019155000000000002 SRR748490 1 kcell normal 0.017121900000000002 SRR372789 1K cell normal 0.00568271