sample tissue condition fpkm SRR1035981 13 hpf rx3+/+ or rx3+/- 15.4572 SRR1299126 caudal fin One day time after treatment 12.9632 SRR1035984 13 hpf normal 12.2438 SRR1299125 caudal fin Half day time after treatment 9.7777 SRR1035978 13 hpf rx3-/- 9.67689 SRR527834 head normal 8.9473 SRR516131 skin male and 5 month 8.2335 SRR1648856 brain normal 7.8331100000000005 SRR886456 256 cell 4-thio-UTP metabolic labeling 7.62197 SRR658535 bud Gata5 morphant 7.321960000000001 SRR516135 skin male and 5 month 6.95087 SRR592701 pineal gland normal 6.932869999999999 SRR658545 6 somite Gata6 morphant 6.85992 ERR023144 brain normal 6.69275 SRR1342216 embryo norml 6.50448 SRR749515 24 hpf eif3ha morphant 6.2815900000000005 SRR658537 bud Gata6 morphant 5.966019999999999 SRR1299129 caudal fin Seven days time after treatment 5.83272 SRR516130 skin male and 5 month 5.79537 SRR1562529 intestine and pancreas normal 5.626 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 5.2659 SRR516133 skin male and 5 month 5.26279 SRR1291417 5 dpi injected marinum 5.17432 SRR1039571 gastrointestinal diet 0.1 NPM 5.05584 SRR1039573 gastrointestinal diet 0.75 NPM 4.86702 SRR749514 24 hpf normal 4.5054099999999995 SRR516126 skin male and 5 month 4.41164 SRR1562530 liver normal 4.2954300000000005 SRR1205160 5dpf transgenic sqET20 and GFP+ 4.276619999999999 SRR1299127 caudal fin Two days time after treatment 4.27182 SRR942769 embryo myd88+/+ 4.19225 SRR658539 bud Gata5/6 morphant 4.17774 ERR023143 swim bladder normal 4.11841 SRR700537 heart Gata4 morpholino 4.05203 SRR658541 6 somite normal 4.01435 SRR516128 skin male and 5 month 4.01094 SRR658543 6 somite Gata5 morphan 3.7093300000000005 SRR372796 bud normal 3.63026 SRR1299128 caudal fin Three days time after treatment 3.58054 SRR527835 tail normal 3.56005 SRR592700 pineal gland normal 3.35296 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 3.29815 SRR1167752 embryo normal 3.26573 SRR527836 24hpf normal 3.23946 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.15365 SRR700534 heart control morpholino 3.1264 SRR592703 pineal gland normal 3.0842400000000003 SRR1299124 caudal fin Zero day time after treatment 3.0807599999999997 SRR1342218 embryo marco morpholino 3.0750900000000003 SRR1562528 eye normal 3.04696 SRR1562531 muscle normal 3.04183 SRR1647679 head kidney normal 3.0319599999999998 SRR1291414 5 dpi normal 3.0221299999999998 SRR1648854 brain normal 3.0043900000000003 SRR1523214 embryo glut12 morpholino 2.99634 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.94007 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2.91782 SRR886455 128 cell 4-thio-UTP metabolic labeling 2.90742 SRR1205154 5dpf transgenic sqET20 2.89656 SRR1648855 brain normal 2.82266 SRR514030 retina id2a morpholino 2.74797 SRR658533 bud normal 2.67219 SRR592702 pineal gland normal 2.64491 SRR891512 blood normal 2.62673 SRR527840 24hpf normal 2.61226 SRR1035239 liver transgenic mCherry control 2.48789 SRR1562533 testis normal 2.44077 SRR1028004 head normal 2.41298 SRR516127 skin male and 5 month 2.2900099999999997 SRR1534350 larvae 5 ug/l BDE47 treatment 2.2361400000000002 SRR516122 skin male and 3.5 year 2.2259 SRR776507 embryo normal 2.12873 SRR1647682 spleen normal 2.07828 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.06765 SRR1621206 embryo normal 2.06276 SRR1569491 embryo normal 2.05476 SRR038627 embryo control morpholino 2.04715 SRR535978 larvae normal 2.021 SRR1028002 head normal 1.98059 SRR527833 5 dpf normal 1.94832 SRR630464 5 dpf injected epidermidis 1.93399 SRR516121 skin male and 3.5 year 1.8678700000000001 SRR941753 posterior pectoral fin normal 1.8659599999999998 SRR1647684 spleen SVCV treatment 1.8622 SRR1647681 head kidney SVCV treatment 1.85388 SRR800045 muscle normal 1.84562 SRR630463 5 dpf normal 1.8296299999999999 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.81443 SRR726540 5 dpf normal 1.80235 SRR516125 skin male and 3.5 year 1.7966400000000002 SRR372791 dome normal 1.7943 SRR1004786 larvae control morpholino 1.72727 SRR1035237 liver transgenic UHRF1 1.7181099999999998 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.70993 SRR633550 larvae exposed to hypoxia stress 1.70688 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.6758099999999998 SRR1708343 embryo MUTAS 1.67127 SRR1004787 larvae impdh1a morpholino 1.64009 SRR372789 1K cell normal 1.6072799999999998 SRR519727 6 dpf FETOH treatment 1.57084 SRR519747 6 dpf VD3 treatment 1.57044 SRR516132 skin male and 5 month 1.56739 SRR1647680 head kidney SVCV treatment 1.5615700000000001 SRR776508 embryo miR-146 knockdown 1.51085 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.50225 SRR516123 skin male and 3.5 year 1.48669 SRR658547 6 somite Gata5/6 morphant 1.44531 SRR372802 5 dpf normal 1.3594 SRR1565815 brain normal 1.31653 SRR1188160 embryo Insulin 4 hpi 1.2892700000000001 SRR891511 brain normal 1.27211 SRR372787 2-4 cell normal 1.26762 SRR1004785 larvae normal 1.26641 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.21249 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.20965 SRR519732 7 dpf FETOH treatment 1.20904 SRR372798 28 hpf normal 1.1878799999999998 SRR592698 pineal gland normal 1.17622 SRR610740 3 dpf normal 1.17021 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.1561 SRR1647683 spleen SVCV treatment 1.1482700000000001 SRR535848 larvae hoxb1b mut 1.09202 SRR519722 4 dpf FETOH treatment 1.0877299999999999 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.0731700000000002 SRR1021213 sphere stage normal 1.0659100000000001 SRR594771 endothelium normal 1.05051 SRR535850 larvae hoxb1b mut 1.0406 SRR1565819 brain normal 1.0302200000000001 SRR1562532 spleen normal 1.01912 SRR1565809 brain normal 1.01544 SRR942764 embryo myd88-/- 1.0000799999999999 SRR726541 5 dpf infection with Mycobacterium marinum 0.9876870000000001 SRR527832 16-36 hpf normal 0.9370040000000001 SRR748490 1 kcell normal 0.93273 SRR1569495 embryo normal 0.923176 SRR1565817 brain normal 0.90738 SRR1167753 embryo bacterial infection 0.903226 SRR519742 4 dpf VD3 treatment 0.90192 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.8984610000000001 SRR891510 muscle normal 0.89528 SRR535913 larvae krox mut 0.859383 SRR535851 larvae normal 0.8589319999999999 SRR516124 skin male and 3.5 year 0.8569760000000001 SRR957180 heart 7 days after heart tip amputation 0.842191 SRR797914 embryo pbx2/4-MO 0.8348620000000001 SRR1048061 pineal gland dark 0.817766 SRR633516 larvae normal 0.8146180000000001 SRR1523211 embryo control morpholino 0.7652939999999999 SRR372793 shield normal 0.729263 ERR594418 retina transgenic flk1 and develop tumors 0.7087289999999999 SRR1004789 larvae impdh2 morpholino 0.690635 ERR594416 retina transgenic flk1 0.6708189999999999 SRR941749 anterior pectoral fin normal 0.6642020000000001 SRR1534349 larvae DMSO vehicle 0.649791 SRR748488 sperm normal 0.643729 SRR514028 retina control morpholino 0.627463 SRR065197 3 dpf U1C knockout 0.597433 SRR1565805 brain normal 0.586964 SRR633544 larvae exposed to cold stress 0.56916 SRR519752 7 dpf VD3 treatment 0.532266 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.47451000000000004 SRR519737 2 dpf VD3 treatment 0.45546099999999995 SRR1565813 brain normal 0.44246 SRR519717 2 dpf FETOH treatment 0.41558 SRR748491 germ ring normal 0.403725 SRR1188156 embryo Control PBS 4 hpi 0.403095 SRR535847 larvae normal 0.402582 SRR1049814 256 cell normal 0.400665 SRR1565807 brain normal 0.39898 SRR535849 larvae normal 0.392959 SRR1104059 heart kctd10 mut 0.383374 SRR1188148 embryo Control PBS 0.5 hpi 0.381485 SRR797911 embryo prdm1-/- 0.38028 SRR372800 2 dpf normal 0.37549099999999996 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.372981 ERR594417 retina normal 0.366588 SRR1021215 sphere stage Mzeomesa 0.357632 SRR535926 larvae normal 0.354524 SRR594769 blood normal 0.349029 SRR1565811 brain normal 0.33727399999999996 SRR527844 24hpf normal 0.31950300000000004 SRR891495 heart normal 0.319089 SRR1104058 heart normal 0.305659 SRR1188152 embryo Insulin 0.5 hpi 0.30459400000000003 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.294822 SRR1708344 embryo MUTPS 0.25603200000000004 SRR797908 embryo normal 0.202763 SRR610741 3 dpf express Ras 0.198697 SRR038624 embryo traf6 morpholino and bacterial infection 0.030273200000000004 SRR800049 sphere stage control treatment 0.015305299999999999