sample tissue condition fpkm SRR514028 retina control morpholino 63.331 SRR514030 retina id2a morpholino 45.746 SRR748489 egg normal 37.931 ERR023144 brain normal 36.1069 SRR1299125 caudal fin Half day time after treatment 33.4072 SRR1569491 embryo normal 30.0154 SRR535978 larvae normal 27.2165 SRR1299126 caudal fin One day time after treatment 26.5714 SRR886456 256 cell 4-thio-UTP metabolic labeling 26.155 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 25.2423 SRR535986 larvae nhsl1b mut 24.6943 SRR1299127 caudal fin Two days time after treatment 24.0079 SRR594771 endothelium normal 23.8875 SRR1299124 caudal fin Zero day time after treatment 23.5791 SRR1299129 caudal fin Seven days time after treatment 22.5308 SRR658545 6 somite Gata6 morphant 21.9617 SRR1299128 caudal fin Three days time after treatment 21.3185 SRR797917 embryo pbx2/4-MO and prdm1-/- 21.2612 SRR658539 bud Gata5/6 morphant 21.1692 SRR797914 embryo pbx2/4-MO 20.8464 SRR886455 128 cell 4-thio-UTP metabolic labeling 20.3804 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 20.0358 SRR516131 skin male and 5 month 19.9166 SRR516123 skin male and 3.5 year 19.8512 SRR797911 embryo prdm1-/- 19.8111 SRR658547 6 somite Gata5/6 morphant 19.6838 SRR658533 bud normal 19.5107 ERR023143 swim bladder normal 19.4243 SRR658541 6 somite normal 19.3882 SRR1569495 embryo normal 19.1336 SRR527840 24hpf normal 19.083 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 18.711 SRR1708345 embryo SIBAS 18.6053 SRR1005529 embryo control morpholino 18.5372 SRR801554 embryo control morpholino 18.5094 SRR797908 embryo normal 18.2068 SRR594769 blood normal 17.7461 SRR1004786 larvae control morpholino 17.5083 SRR516125 skin male and 3.5 year 17.3456 SRR886457 512 cell 4-thio-UTP metabolic labeling 17.1718 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 17.152 SRR516121 skin male and 3.5 year 16.8695 SRR1205160 5dpf transgenic sqET20 and GFP+ 16.6871 SRR516127 skin male and 5 month 16.4357 SRR658537 bud Gata6 morphant 16.3995 SRR516128 skin male and 5 month 16.3403 SRR1205154 5dpf transgenic sqET20 16.2549 SRR1035981 13 hpf rx3+/+ or rx3+/- 16.1978 SRR516126 skin male and 5 month 16.1514 SRR1004785 larvae normal 16.0371 SRR658535 bud Gata5 morphant 15.8364 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 15.8028 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 15.7986 SRR749515 24 hpf eif3ha morphant 15.7441 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 15.4525 SRR1708346 embryo SIBPS 15.4144 SRR527844 24hpf normal 15.3687 SRR658543 6 somite Gata5 morphan 15.321 SRR1565805 brain normal 15.1732 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 15.0844 SRR1523211 embryo control morpholino 15.0213 SRR630464 5 dpf injected epidermidis 14.9812 SRR1004788 larvae impdh1b morpholino 14.9328 SRR700534 heart control morpholino 14.9302 SRR1021215 sphere stage Mzeomesa 14.9239 SRR1565813 brain normal 14.9107 SRR516122 skin male and 3.5 year 14.8495 SRR1565819 brain normal 14.7288 SRR1021213 sphere stage normal 14.6704 SRR1035237 liver transgenic UHRF1 14.6369 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 14.6283 SRR1035978 13 hpf rx3-/- 14.6137 SRR1565817 brain normal 14.5761 SRR1565807 brain normal 14.4925 SRR1291417 5 dpi injected marinum 14.3971 SRR527836 24hpf normal 14.3565 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 14.3013 SRR1565811 brain normal 14.2403 SRR516133 skin male and 5 month 14.100999999999999 SRR700537 heart Gata4 morpholino 13.8747 SRR1565809 brain normal 13.8005 SRR630463 5 dpf normal 13.7653 SRR1565815 brain normal 13.7197 SRR748488 sperm normal 13.6 SRR1708344 embryo MUTPS 13.3621 SRR516124 skin male and 3.5 year 13.1878 SRR776507 embryo normal 13.1705 SRR516129 skin male and 5 month 13.0625 SRR1562531 muscle normal 12.9854 SRR1291414 5 dpi normal 12.7557 SRR1167763 embryo ptpn6 morpholino and bacterial infection 12.7436 SRR516134 skin male and 5 month 12.6765 ERR023145 heart normal 12.4363 SRR749514 24 hpf normal 12.4177 SRR516130 skin male and 5 month 12.3699 SRR038627 embryo control morpholino 12.1144 SRR1005530 embryo RPL11 morpholino 12.0876 SRR1342218 embryo marco morpholino 12.0128 SRR527835 tail normal 11.8309 SRR941749 anterior pectoral fin normal 11.687000000000001 SRR942769 embryo myd88+/+ 11.5981 SRR1104058 heart normal 11.2579 SRR1342216 embryo norml 11.2363 SRR1167753 embryo bacterial infection 11.0269 SRR776508 embryo miR-146 knockdown 10.902999999999999 SRR1188148 embryo Control PBS 0.5 hpi 10.7091 SRR1188152 embryo Insulin 0.5 hpi 10.7045 SRR1647679 head kidney normal 10.568 SRR1167752 embryo normal 10.5276 SRR776509 embryo Salmonella infected 10.3757 ERR594418 retina transgenic flk1 and develop tumors 10.3274 SRR1004787 larvae impdh1a morpholino 10.2967 SRR1647683 spleen SVCV treatment 10.280999999999999 SRR1647684 spleen SVCV treatment 10.2456 SRR535926 larvae normal 10.0942 ERR594417 retina normal 10.0692 SRR1167762 embryo ptpn6 morpholino 9.91804 SRR516135 skin male and 5 month 9.9012 SRR1167756 embryo mpeg1 morpholino 9.80766 SRR801556 embryo RPS19 and p53 morpholino 9.795760000000001 SRR516132 skin male and 5 month 9.79015 SRR527832 16-36 hpf normal 9.70684 SRR1188160 embryo Insulin 4 hpi 9.622910000000001 SRR1647680 head kidney SVCV treatment 9.565719999999999 SRR801555 embryo RPS19 morpholino 9.55458 SRR1167757 embryo mpeg1 morpholino and bacterial infection 9.4255 SRR535943 larvae vangl mut 9.311 SRR038624 embryo traf6 morpholino and bacterial infection 9.16672 ERR023146 head kidney normal 9.1314 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 9.092360000000001 SRR1104059 heart kctd10 mut 9.08389 SRR527833 5 dpf normal 8.976389999999999 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 8.96607 SRR535890 larvae normal 8.93684 SRR1523214 embryo glut12 morpholino 8.93568 SRR776510 embryo Salmonella infected and miR-146 knockdown 8.78773 SRR1035239 liver transgenic mCherry control 8.68187 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 8.63255 ERR594416 retina transgenic flk1 8.558530000000001 SRR1647682 spleen normal 8.30462 SRR1708343 embryo MUTAS 8.30456 SRR942764 embryo myd88-/- 8.046489999999999 SRR527834 head normal 7.938210000000001 SRR831692 embryo normal 7.835489999999999 SRR941753 posterior pectoral fin normal 7.78251 SRR1035984 13 hpf normal 7.74885 SRR726540 5 dpf normal 7.683489999999999 SRR1647681 head kidney SVCV treatment 7.63002 SRR038625 embryo traf6 morpholino 7.6264199999999995 SRR1342217 embryo infection with Mycobacterium marinum 7.482710000000001 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 7.44453 SRR1562528 eye normal 7.326389999999999 SRR592699 pineal gland normal 7.25188 SRR519717 2 dpf FETOH treatment 7.033410000000001 SRR038626 embryo control morpholino and bacterial infection 6.8727800000000006 SRR1188156 embryo Control PBS 4 hpi 6.8548800000000005 SRR535913 larvae krox mut 6.8498399999999995 SRR065197 3 dpf U1C knockout 6.580710000000001 SRR1039571 gastrointestinal diet 0.1 NPM 6.54143 SRR519752 7 dpf VD3 treatment 6.51654 SRR519747 6 dpf VD3 treatment 6.463509999999999 SRR748490 1 kcell normal 6.42547 SRR1004789 larvae impdh2 morpholino 6.25999 SRR065196 3 dpf normal 6.24977 SRR519737 2 dpf VD3 treatment 6.19415 SRR1028004 head normal 5.965380000000001 SRR748491 germ ring normal 5.95317 SRR535849 larvae normal 5.77254 SRR519732 7 dpf FETOH treatment 5.766830000000001 SRR726542 5 dpf infection with control 5.76058 SRR535852 larvae hoxb1b mut 5.616619999999999 SRR519722 4 dpf FETOH treatment 5.43722 SRR519727 6 dpf FETOH treatment 5.39233 SRR1534350 larvae 5 ug/l BDE47 treatment 5.3678 SRR519742 4 dpf VD3 treatment 5.34201 SRR1562532 spleen normal 5.23834 SRR1562533 testis normal 5.17764 SRR535848 larvae hoxb1b mut 5.09692 SRR535851 larvae normal 5.04491 SRR1534349 larvae DMSO vehicle 5.0435 SRR610742 3 dpf express NICD 4.88818 SRR1028002 head normal 4.7889 SRR1534351 larvae 500 ug/l BDE47 treatment 4.70934 SRR1562530 liver normal 4.44803 SRR535847 larvae normal 4.38783 SRR1562529 intestine and pancreas normal 4.33824 SRR633516 larvae normal 4.3291699999999995 SRR610740 3 dpf normal 4.2308900000000005 SRR633550 larvae exposed to hypoxia stress 4.22473 SRR891510 muscle normal 4.14366 SRR726541 5 dpf infection with Mycobacterium marinum 4.1340699999999995 SRR891495 heart normal 3.9611 SRR633544 larvae exposed to cold stress 3.7116599999999997 SRR1048059 pineal gland light 3.66025 SRR891511 brain normal 3.6162099999999997 SRR592702 pineal gland normal 3.59436 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 3.17856 SRR610741 3 dpf express Ras 3.16973 SRR592703 pineal gland normal 3.08028 SRR1048061 pineal gland dark 3.03313 SRR1028003 head normal 3.0246 SRR1039573 gastrointestinal diet 0.75 NPM 2.9915700000000003 SRR592700 pineal gland normal 2.7710000000000004 SRR592698 pineal gland normal 2.7266 SRR800049 sphere stage control treatment 2.5533900000000003 SRR800043 sphere stage normal 2.46786 SRR535850 larvae hoxb1b mut 2.2161299999999997 SRR891512 blood normal 2.12442 SRR800037 egg normal 2.09329 SRR800045 muscle normal 2.01366 SRR592701 pineal gland normal 2.00667 SRR800046 sphere stage 5azaCyD treatment 1.88545 SRR891504 liver normal 0.569248 SRR1648854 brain normal 0.15370899999999998 SRR1648856 brain normal 0.091182 SRR372802 5 dpf normal 0.07787589999999998