sample tissue condition fpkm SRR1299125 caudal fin Half day time after treatment 9.02683 SRR1299124 caudal fin Zero day time after treatment 8.99583 SRR1299126 caudal fin One day time after treatment 8.49687 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 8.10355 SRR1299127 caudal fin Two days time after treatment 5.97849 SRR516122 skin male and 3.5 year 5.0587599999999995 SRR516121 skin male and 3.5 year 4.8491800000000005 SRR527836 24hpf normal 4.55509 SRR1299128 caudal fin Three days time after treatment 4.53913 SRR527840 24hpf normal 4.14813 SRR1299129 caudal fin Seven days time after treatment 4.01881 SRR516125 skin male and 3.5 year 3.5882699999999996 SRR527844 24hpf normal 3.56995 SRR1021213 sphere stage normal 3.40624 SRR1021215 sphere stage Mzeomesa 3.27875 SRR516123 skin male and 3.5 year 3.13124 SRR797914 embryo pbx2/4-MO 3.0898 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.7891 ERR023146 head kidney normal 2.75948 SRR797911 embryo prdm1-/- 2.41038 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.2399 SRR516133 skin male and 5 month 2.04086 SRR748491 germ ring normal 1.9608700000000001 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 1.92805 SRR516129 skin male and 5 month 1.90687 SRR800049 sphere stage control treatment 1.87103 SRR516131 skin male and 5 month 1.8493400000000002 SRR516127 skin male and 5 month 1.8013400000000002 SRR1342217 embryo infection with Mycobacterium marinum 1.68215 SRR372793 shield normal 1.63983 SRR800043 sphere stage normal 1.61224 SRR535978 larvae normal 1.60483 SRR797908 embryo normal 1.57569 ERR023145 heart normal 1.5519100000000001 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.49374 SRR516124 skin male and 3.5 year 1.43844 SRR658539 bud Gata5/6 morphant 1.41065 SRR1004786 larvae control morpholino 1.36725 SRR658535 bud Gata5 morphant 1.32444 SRR1039571 gastrointestinal diet 0.1 NPM 1.2891 SRR1039573 gastrointestinal diet 0.75 NPM 1.26981 SRR1004789 larvae impdh2 morpholino 1.21845 ERR023143 swim bladder normal 1.1704299999999999 SRR658533 bud normal 1.1523299999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.11024 SRR516130 skin male and 5 month 1.0625200000000001 SRR658537 bud Gata6 morphant 1.0238 SRR1004788 larvae impdh1b morpholino 0.991341 SRR801556 embryo RPS19 and p53 morpholino 0.952242 SRR1523214 embryo glut12 morpholino 0.933969 SRR516128 skin male and 5 month 0.9316540000000001 SRR1005529 embryo control morpholino 0.8766379999999999 SRR801554 embryo control morpholino 0.8753190000000001 SRR516134 skin male and 5 month 0.8315100000000001 SRR658541 6 somite normal 0.81689 SRR800046 sphere stage 5azaCyD treatment 0.816395 SRR1167762 embryo ptpn6 morpholino 0.8022699999999999 SRR535913 larvae krox mut 0.6782130000000001 SRR1167753 embryo bacterial infection 0.6732239999999999 SRR1342216 embryo norml 0.668141 SRR630464 5 dpf injected epidermidis 0.659258 SRR1188152 embryo Insulin 0.5 hpi 0.658253 SRR594769 blood normal 0.63702 SRR1534351 larvae 500 ug/l BDE47 treatment 0.63368 SRR1523211 embryo control morpholino 0.629684 SRR372796 bud normal 0.624967 SRR527832 16-36 hpf normal 0.624808 SRR630463 5 dpf normal 0.62259 SRR658545 6 somite Gata6 morphant 0.622574 SRR1167752 embryo normal 0.610693 SRR516132 skin male and 5 month 0.5997319999999999 SRR535986 larvae nhsl1b mut 0.599521 SRR535926 larvae normal 0.592625 SRR1188148 embryo Control PBS 0.5 hpi 0.591607 SRR1188156 embryo Control PBS 4 hpi 0.573629 SRR1291414 5 dpi normal 0.564788 SRR1004785 larvae normal 0.5332210000000001 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.5285850000000001 SRR942769 embryo myd88+/+ 0.526071 SRR594771 endothelium normal 0.52341 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.51565 SRR1534349 larvae DMSO vehicle 0.514162 SRR776507 embryo normal 0.493331 SRR891512 blood normal 0.484609 SRR1035978 13 hpf rx3-/- 0.47593 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.467624 SRR527834 head normal 0.464521 SRR1035237 liver transgenic UHRF1 0.446925 SRR1205154 5dpf transgenic sqET20 0.44504799999999994 SRR658547 6 somite Gata5/6 morphant 0.444846 SRR1291417 5 dpi injected marinum 0.42558500000000005 SRR1004787 larvae impdh1a morpholino 0.425458 SRR1534350 larvae 5 ug/l BDE47 treatment 0.42435100000000003 SRR527833 5 dpf normal 0.422232 ERR594417 retina normal 0.420113 SRR1104058 heart normal 0.41886599999999996 SRR1569491 embryo normal 0.418217 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.412408 SRR516126 skin male and 5 month 0.41016099999999994 SRR514028 retina control morpholino 0.40535 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.399902 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.39281900000000003 SRR776508 embryo miR-146 knockdown 0.392449 SRR516135 skin male and 5 month 0.386785 SRR592703 pineal gland normal 0.378474 SRR372800 2 dpf normal 0.378054 SRR1708343 embryo MUTAS 0.367681 SRR776509 embryo Salmonella infected 0.366722 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.36489 SRR726541 5 dpf infection with Mycobacterium marinum 0.35851500000000003 SRR1188160 embryo Insulin 4 hpi 0.357268 SRR941749 anterior pectoral fin normal 0.354502 SRR726542 5 dpf infection with control 0.349055 SRR1104059 heart kctd10 mut 0.335425 SRR1708346 embryo SIBPS 0.331244 SRR658543 6 somite Gata5 morphan 0.326656 SRR633544 larvae exposed to cold stress 0.323158 SRR372791 dome normal 0.31911999999999996 SRR1028004 head normal 0.318703 SRR1708344 embryo MUTPS 0.30587 SRR941753 posterior pectoral fin normal 0.300639 SRR372798 28 hpf normal 0.297396 SRR514030 retina id2a morpholino 0.27926999999999996 SRR1562533 testis normal 0.26649 SRR1708345 embryo SIBAS 0.26394 SRR1647679 head kidney normal 0.255265 SRR535850 larvae hoxb1b mut 0.254108 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.248928 SRR038627 embryo control morpholino 0.24313099999999999 SRR801555 embryo RPS19 morpholino 0.23830199999999999 SRR942764 embryo myd88-/- 0.237587 SRR891504 liver normal 0.23467399999999997 SRR726540 5 dpf normal 0.230994 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.224122 ERR594418 retina transgenic flk1 and develop tumors 0.221057 SRR1005530 embryo RPL11 morpholino 0.219703 SRR592699 pineal gland normal 0.21858699999999998 SRR065197 3 dpf U1C knockout 0.21838400000000002 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.215094 SRR1028002 head normal 0.20856 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.20533800000000002 SRR1647681 head kidney SVCV treatment 0.20515999999999998 SRR535890 larvae normal 0.201819 SRR1565813 brain normal 0.200667 SRR1569495 embryo normal 0.199346 SRR535943 larvae vangl mut 0.19780899999999998 SRR535852 larvae hoxb1b mut 0.19397 ERR023144 brain normal 0.191296 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.183892 SRR038625 embryo traf6 morpholino 0.179366 SRR1648856 brain normal 0.177295 SRR1647680 head kidney SVCV treatment 0.175479 SRR1167756 embryo mpeg1 morpholino 0.174213 SRR1048061 pineal gland dark 0.169141 SRR038626 embryo control morpholino and bacterial infection 0.168669 SRR527835 tail normal 0.160916 SRR831692 embryo normal 0.15616300000000002 SRR1342218 embryo marco morpholino 0.153253 SRR372802 5 dpf normal 0.14768699999999998 SRR1647682 spleen normal 0.147062 SRR610740 3 dpf normal 0.139511 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.13928800000000002 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.139122 SRR1647684 spleen SVCV treatment 0.138935 SRR700534 heart control morpholino 0.136792 SRR535849 larvae normal 0.134651 SRR535847 larvae normal 0.12112300000000001 SRR535848 larvae hoxb1b mut 0.119216 SRR610741 3 dpf express Ras 0.11785599999999999 SRR633516 larvae normal 0.114266 SRR1562529 intestine and pancreas normal 0.11423 SRR519722 4 dpf FETOH treatment 0.113901 SRR519727 6 dpf FETOH treatment 0.11290499999999999 SRR1647683 spleen SVCV treatment 0.11276099999999999 SRR633550 larvae exposed to hypoxia stress 0.10818599999999999 ERR594416 retina transgenic flk1 0.10498699999999998 SRR1028003 head normal 0.104777 SRR535851 larvae normal 0.10317899999999999 SRR1648854 brain normal 0.10256300000000002 SRR748488 sperm normal 0.09743099999999999 SRR592702 pineal gland normal 0.09485189999999999 SRR519752 7 dpf VD3 treatment 0.0923169 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.092053 SRR700537 heart Gata4 morpholino 0.0912142 SRR519732 7 dpf FETOH treatment 0.08618819999999999 SRR065196 3 dpf normal 0.086042 SRR519717 2 dpf FETOH treatment 0.0823822 SRR519747 6 dpf VD3 treatment 0.08043550000000001 SRR1565815 brain normal 0.0770554 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.0760963 SRR519737 2 dpf VD3 treatment 0.0746857 SRR1565805 brain normal 0.0724619 SRR749514 24 hpf normal 0.0683151 SRR1648855 brain normal 0.06161799999999999 SRR592700 pineal gland normal 0.0593241 SRR592701 pineal gland normal 0.0593061 SRR038624 embryo traf6 morpholino and bacterial infection 0.0574914 SRR519742 4 dpf VD3 treatment 0.056802 SRR610742 3 dpf express NICD 0.052987599999999996 SRR1562531 muscle normal 0.0518768 SRR1562528 eye normal 0.050070800000000006 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.040024300000000006 SRR1565809 brain normal 0.0390589 SRR1565807 brain normal 0.030738799999999997 SRR957180 heart 7 days after heart tip amputation 0.0271295 SRR749515 24 hpf eif3ha morphant 0.026690600000000002 SRR748490 1 kcell normal 0.026665300000000003 SRR1565811 brain normal 0.0248149 SRR1621206 embryo normal 0.02022 SRR1565817 brain normal 0.00951358 SRR1565819 brain normal 0.00855873 SRR1049814 256 cell normal 0.00143929