sample tissue condition fpkm SRR748491 germ ring normal 12.9385 SRR797917 embryo pbx2/4-MO and prdm1-/- 9.11937 SRR797908 embryo normal 9.10565 SRR658539 bud Gata5/6 morphant 8.532910000000001 SRR658535 bud Gata5 morphant 8.41122 SRR797911 embryo prdm1-/- 7.52762 SRR527836 24hpf normal 7.18 SRR658533 bud normal 6.96105 SRR797914 embryo pbx2/4-MO 6.686939999999999 SRR658545 6 somite Gata6 morphant 6.3063400000000005 SRR1004788 larvae impdh1b morpholino 6.16215 SRR658537 bud Gata6 morphant 6.07977 SRR658543 6 somite Gata5 morphan 5.9979 SRR527840 24hpf normal 5.968319999999999 SRR800049 sphere stage control treatment 5.73255 SRR1035978 13 hpf rx3-/- 5.5797099999999995 SRR658541 6 somite normal 5.45857 SRR1035981 13 hpf rx3+/+ or rx3+/- 5.43778 SRR1004786 larvae control morpholino 5.31018 SRR658547 6 somite Gata5/6 morphant 5.1950199999999995 SRR1299127 caudal fin Two days time after treatment 4.78238 SRR1569491 embryo normal 4.30543 SRR1035984 13 hpf normal 4.29838 SRR776507 embryo normal 3.9332300000000004 SRR1299128 caudal fin Three days time after treatment 3.89264 SRR1708345 embryo SIBAS 3.8924800000000004 SRR1005529 embryo control morpholino 3.89203 SRR801554 embryo control morpholino 3.8861800000000004 SRR776508 embryo miR-146 knockdown 3.8360800000000004 SRR1004789 larvae impdh2 morpholino 3.5559800000000004 SRR800043 sphere stage normal 3.42279 SRR1004785 larvae normal 3.3561099999999997 SRR514028 retina control morpholino 3.26517 SRR800046 sphere stage 5azaCyD treatment 3.25263 SRR749515 24 hpf eif3ha morphant 3.2380400000000003 SRR776510 embryo Salmonella infected and miR-146 knockdown 3.1947200000000002 ERR023143 swim bladder normal 3.19358 ERR023144 brain normal 3.1499900000000003 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 3.1177799999999998 SRR1299129 caudal fin Seven days time after treatment 3.11728 SRR1167756 embryo mpeg1 morpholino 3.02598 SRR776509 embryo Salmonella infected 3.0224 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.9990900000000003 SRR527844 24hpf normal 2.95558 SRR038627 embryo control morpholino 2.95341 SRR038626 embryo control morpholino and bacterial infection 2.9456 SRR1104058 heart normal 2.92243 SRR594771 endothelium normal 2.8956 SRR592700 pineal gland normal 2.89083 SRR592698 pineal gland normal 2.88532 SRR1299124 caudal fin Zero day time after treatment 2.8834 SRR1104059 heart kctd10 mut 2.78448 SRR1205154 5dpf transgenic sqET20 2.77523 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 2.75657 SRR1299126 caudal fin One day time after treatment 2.74935 SRR592702 pineal gland normal 2.73512 SRR535986 larvae nhsl1b mut 2.7109 SRR1534350 larvae 5 ug/l BDE47 treatment 2.70851 SRR1569495 embryo normal 2.68649 SRR1565811 brain normal 2.67564 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.67167 SRR749514 24 hpf normal 2.64832 SRR1048059 pineal gland light 2.6226599999999998 SRR1188152 embryo Insulin 0.5 hpi 2.61765 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.60201 SRR592701 pineal gland normal 2.60107 ERR023145 heart normal 2.59708 ERR594418 retina transgenic flk1 and develop tumors 2.58795 SRR1523214 embryo glut12 morpholino 2.55554 SRR1004787 larvae impdh1a morpholino 2.53342 SRR516127 skin male and 5 month 2.52008 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.51606 SRR1299125 caudal fin Half day time after treatment 2.48402 SRR700537 heart Gata4 morpholino 2.47333 SRR519717 2 dpf FETOH treatment 2.45005 SRR514030 retina id2a morpholino 2.4317900000000003 SRR1291417 5 dpi injected marinum 2.4285900000000002 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.41941 SRR1167762 embryo ptpn6 morpholino 2.41264 SRR592703 pineal gland normal 2.4094700000000002 SRR1708343 embryo MUTAS 2.4070400000000003 SRR1167752 embryo normal 2.37442 SRR1291414 5 dpi normal 2.36691 SRR592699 pineal gland normal 2.35405 SRR800037 egg normal 2.32626 SRR801556 embryo RPS19 and p53 morpholino 2.30704 SRR1188148 embryo Control PBS 0.5 hpi 2.2968 SRR1708346 embryo SIBPS 2.2784400000000002 SRR519737 2 dpf VD3 treatment 2.27486 SRR941753 posterior pectoral fin normal 2.2711900000000003 SRR630464 5 dpf injected epidermidis 2.24859 SRR1534349 larvae DMSO vehicle 2.24841 SRR527833 5 dpf normal 2.24704 SRR801555 embryo RPS19 morpholino 2.24097 SRR610742 3 dpf express NICD 2.21926 SRR1188156 embryo Control PBS 4 hpi 2.1938299999999997 SRR633550 larvae exposed to hypoxia stress 2.17841 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.1613 ERR594417 retina normal 2.14712 ERR594416 retina transgenic flk1 2.13554 SRR610741 3 dpf express Ras 2.13329 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 2.12754 SRR941749 anterior pectoral fin normal 2.06511 SRR516126 skin male and 5 month 2.06264 SRR1523211 embryo control morpholino 1.97813 SRR065197 3 dpf U1C knockout 1.9490299999999998 SRR1167753 embryo bacterial infection 1.94452 SRR942769 embryo myd88+/+ 1.9443099999999998 SRR1342216 embryo norml 1.94019 SRR1188160 embryo Insulin 4 hpi 1.9192 SRR633544 larvae exposed to cold stress 1.9150599999999998 ERR023146 head kidney normal 1.90168 SRR633516 larvae normal 1.8893099999999998 SRR594769 blood normal 1.88437 SRR1565809 brain normal 1.87822 SRR1708344 embryo MUTPS 1.8678099999999997 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.8432400000000002 SRR1048061 pineal gland dark 1.81682 SRR610740 3 dpf normal 1.80287 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.80201 SRR065196 3 dpf normal 1.7771 SRR1647680 head kidney SVCV treatment 1.7729 SRR535978 larvae normal 1.76416 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.7261900000000001 SRR1005530 embryo RPL11 morpholino 1.7244700000000002 SRR516123 skin male and 3.5 year 1.6939 SRR630463 5 dpf normal 1.68567 SRR038625 embryo traf6 morpholino 1.6715200000000001 SRR1342218 embryo marco morpholino 1.6658400000000002 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.642 SRR527832 16-36 hpf normal 1.62614 SRR1647682 spleen normal 1.6196 SRR1035237 liver transgenic UHRF1 1.5981299999999998 SRR1534351 larvae 500 ug/l BDE47 treatment 1.52415 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 1.5211700000000001 SRR1035239 liver transgenic mCherry control 1.51981 SRR516122 skin male and 3.5 year 1.51557 SRR516128 skin male and 5 month 1.50864 SRR519742 4 dpf VD3 treatment 1.5050700000000001 SRR1028003 head normal 1.4885899999999999 SRR519722 4 dpf FETOH treatment 1.48489 SRR1565815 brain normal 1.48275 SRR1021215 sphere stage Mzeomesa 1.48245 SRR1342217 embryo infection with Mycobacterium marinum 1.4743700000000002 SRR516130 skin male and 5 month 1.46028 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.4383700000000001 SRR516131 skin male and 5 month 1.43546 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.4268 SRR1647683 spleen SVCV treatment 1.42277 SRR1565807 brain normal 1.40679 SRR516129 skin male and 5 month 1.3902700000000001 SRR038624 embryo traf6 morpholino and bacterial infection 1.38225 SRR700534 heart control morpholino 1.38171 SRR891495 heart normal 1.36358 SRR1647684 spleen SVCV treatment 1.36006 SRR519732 7 dpf FETOH treatment 1.3568200000000001 SRR1565819 brain normal 1.35618 SRR519752 7 dpf VD3 treatment 1.3539700000000001 SRR535913 larvae krox mut 1.32484 SRR1028002 head normal 1.31082 SRR519747 6 dpf VD3 treatment 1.31017 SRR1021213 sphere stage normal 1.3022799999999999 SRR1028004 head normal 1.29798 SRR519727 6 dpf FETOH treatment 1.29546 SRR535890 larvae normal 1.29315 SRR1647681 head kidney SVCV treatment 1.27205 SRR891512 blood normal 1.26722 SRR942764 embryo myd88-/- 1.21249 SRR1562531 muscle normal 1.18945 SRR1647679 head kidney normal 1.1748399999999999 SRR726540 5 dpf normal 1.1588100000000001 SRR891504 liver normal 1.1346 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.11192 SRR1565817 brain normal 1.10459 SRR535926 larvae normal 1.0953600000000001 SRR516125 skin male and 3.5 year 1.0897700000000001 SRR516124 skin male and 3.5 year 1.07485 SRR1565805 brain normal 1.05749 SRR1565813 brain normal 1.05518 SRR726542 5 dpf infection with control 1.0536 SRR1039573 gastrointestinal diet 0.75 NPM 1.02799 SRR516135 skin male and 5 month 0.964884 SRR516133 skin male and 5 month 0.9460069999999999 SRR800045 muscle normal 0.941893 SRR516132 skin male and 5 month 0.94027 SRR535943 larvae vangl mut 0.933793 SRR1039571 gastrointestinal diet 0.1 NPM 0.853166 SRR891511 brain normal 0.8478950000000001 SRR516134 skin male and 5 month 0.8408120000000001 SRR1562529 intestine and pancreas normal 0.807854 SRR1562533 testis normal 0.726607 SRR1562532 spleen normal 0.72511 SRR1562528 eye normal 0.698152 SRR891510 muscle normal 0.685242 SRR1562530 liver normal 0.680926 SRR535848 larvae hoxb1b mut 0.675415 SRR535849 larvae normal 0.653369 SRR726541 5 dpf infection with Mycobacterium marinum 0.609272 SRR527834 head normal 0.5909439999999999 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.579906 SRR748490 1 kcell normal 0.511908 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.48489399999999994 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.47399300000000005 SRR535852 larvae hoxb1b mut 0.47039899999999996 SRR748489 egg normal 0.461399 SRR831692 embryo normal 0.431676 SRR516121 skin male and 3.5 year 0.43066000000000004 SRR535847 larvae normal 0.422716 SRR372793 shield normal 0.382413 SRR535851 larvae normal 0.37095700000000004 SRR527835 tail normal 0.357686 SRR748488 sperm normal 0.323535 SRR535850 larvae hoxb1b mut 0.321937 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.218892 SRR372796 bud normal 0.197165 SRR372791 dome normal 0.164695 SRR372798 28 hpf normal 0.09274199999999999 SRR372800 2 dpf normal 0.0642707 SRR1621206 embryo normal 0.0362816 SRR372802 5 dpf normal 0.0351056 SRR372789 1K cell normal 0.034723199999999996 SRR957181 heart normal 0.014682299999999997 SRR372787 2-4 cell normal 0.011964299999999999