sample tissue condition fpkm SRR1708345 embryo SIBAS 68.2602 SRR776507 embryo normal 49.3713 SRR776508 embryo miR-146 knockdown 45.7538 SRR535978 larvae normal 44.2514 SRR372800 2 dpf normal 43.6058 ERR023145 heart normal 40.6485 SRR776509 embryo Salmonella infected 37.4065 SRR776510 embryo Salmonella infected and miR-146 knockdown 37.3608 SRR372798 28 hpf normal 35.0203 SRR1569491 embryo normal 34.0807 SRR1708346 embryo SIBPS 33.202 SRR535986 larvae nhsl1b mut 30.3733 SRR527836 24hpf normal 30.0322 SRR1708343 embryo MUTAS 29.7634 SRR1569495 embryo normal 25.9351 SRR527844 24hpf normal 25.8005 SRR1708344 embryo MUTPS 24.956999999999997 SRR594771 endothelium normal 24.7398 SRR527840 24hpf normal 23.3155 SRR535943 larvae vangl mut 21.2618 SRR535926 larvae normal 19.8566 SRR372796 bud normal 18.5671 SRR535913 larvae krox mut 17.0985 SRR1104059 heart kctd10 mut 16.9836 SRR749514 24 hpf normal 16.6612 SRR535890 larvae normal 15.5454 SRR1299125 caudal fin Half day time after treatment 15.5246 SRR1299124 caudal fin Zero day time after treatment 14.6216 SRR1004786 larvae control morpholino 13.8015 SRR658547 6 somite Gata5/6 morphant 13.4601 SRR658541 6 somite normal 13.0223 SRR1004785 larvae normal 13.0192 SRR749515 24 hpf eif3ha morphant 12.8936 SRR658533 bud normal 12.8901 ERR023146 head kidney normal 12.2914 SRR1299126 caudal fin One day time after treatment 12.2618 SRR1648856 brain normal 12.0783 SRR797911 embryo prdm1-/- 12.0723 SRR1104058 heart normal 11.9252 SRR797908 embryo normal 11.3614 SRR658545 6 somite Gata6 morphant 11.3433 ERR023143 swim bladder normal 10.9074 SRR1299127 caudal fin Two days time after treatment 10.6976 SRR1299129 caudal fin Seven days time after treatment 9.736 SRR658543 6 somite Gata5 morphan 9.565439999999999 SRR797914 embryo pbx2/4-MO 9.29347 SRR801555 embryo RPS19 morpholino 9.21625 SRR372793 shield normal 9.12471 SRR1648854 brain normal 8.96824 SRR797917 embryo pbx2/4-MO and prdm1-/- 8.87088 SRR658539 bud Gata5/6 morphant 8.40339 SRR527832 16-36 hpf normal 8.07357 SRR1004788 larvae impdh1b morpholino 7.92697 SRR1299128 caudal fin Three days time after treatment 7.512110000000001 SRR658535 bud Gata5 morphant 7.44251 SRR1005529 embryo control morpholino 7.355160000000001 SRR801554 embryo control morpholino 7.3444199999999995 SRR1035978 13 hpf rx3-/- 7.23882 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 7.13535 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 7.134930000000001 SRR514030 retina id2a morpholino 6.94295 SRR1205154 5dpf transgenic sqET20 6.876689999999999 SRR700537 heart Gata4 morpholino 6.7126600000000005 SRR592699 pineal gland normal 6.69481 SRR801556 embryo RPS19 and p53 morpholino 6.61225 SRR658537 bud Gata6 morphant 6.555610000000001 SRR519717 2 dpf FETOH treatment 6.41351 SRR941749 anterior pectoral fin normal 6.39083 SRR514028 retina control morpholino 6.20406 SRR372802 5 dpf normal 6.05797 SRR516131 skin male and 5 month 5.991140000000001 SRR038626 embryo control morpholino and bacterial infection 5.977530000000001 SRR516134 skin male and 5 month 5.897819999999999 SRR1005530 embryo RPL11 morpholino 5.7239 SRR516133 skin male and 5 month 5.7224 SRR1648855 brain normal 5.682230000000001 SRR519737 2 dpf VD3 treatment 5.25385 ERR023144 brain normal 5.19781 SRR594769 blood normal 5.17703 SRR516122 skin male and 3.5 year 5.11292 SRR592702 pineal gland normal 5.0743599999999995 SRR957181 heart normal 5.0492300000000006 SRR038627 embryo control morpholino 4.89979 SRR038625 embryo traf6 morpholino 4.84952 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 4.72029 SRR1167752 embryo normal 4.70942 SRR1035981 13 hpf rx3+/+ or rx3+/- 4.7012599999999996 SRR592703 pineal gland normal 4.36581 SRR630463 5 dpf normal 4.23148 SRR516125 skin male and 3.5 year 4.15048 SRR1342216 embryo norml 4.09584 SRR941753 posterior pectoral fin normal 4.08699 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 4.056019999999999 SRR038624 embryo traf6 morpholino and bacterial infection 4.02895 SRR592701 pineal gland normal 3.9859699999999996 SRR516127 skin male and 5 month 3.8281300000000003 SRR942764 embryo myd88-/- 3.74031 SRR516123 skin male and 3.5 year 3.65619 SRR1342217 embryo infection with Mycobacterium marinum 3.6456 SRR1205160 5dpf transgenic sqET20 and GFP+ 3.5992900000000003 SRR942769 embryo myd88+/+ 3.45535 SRR700534 heart control morpholino 3.4536 SRR516132 skin male and 5 month 3.3621800000000004 SRR630464 5 dpf injected epidermidis 3.34418 SRR1188148 embryo Control PBS 0.5 hpi 3.25366 SRR1028003 head normal 3.21005 SRR1167753 embryo bacterial infection 3.14431 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.1166400000000003 SRR957180 heart 7 days after heart tip amputation 3.11335 SRR1167762 embryo ptpn6 morpholino 3.08638 SRR516128 skin male and 5 month 3.07609 SRR592700 pineal gland normal 3.04167 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.00201 SRR516126 skin male and 5 month 2.97549 SRR592698 pineal gland normal 2.95799 SRR831692 embryo normal 2.9222200000000003 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.84884 SRR1291414 5 dpi normal 2.82287 SRR1342218 embryo marco morpholino 2.80151 SRR1028002 head normal 2.75242 SRR516130 skin male and 5 month 2.72417 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2.6944 SRR516124 skin male and 3.5 year 2.67163 SRR1048061 pineal gland dark 2.6207 SRR1188152 embryo Insulin 0.5 hpi 2.5678099999999997 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.489 SRR1523211 embryo control morpholino 2.4877 SRR610742 3 dpf express NICD 2.45627 SRR1028004 head normal 2.44157 SRR1167756 embryo mpeg1 morpholino 2.36135 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.30146 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.26264 SRR1188156 embryo Control PBS 4 hpi 2.2589799999999998 SRR1523214 embryo glut12 morpholino 2.23314 SRR1048059 pineal gland light 2.15384 SRR610740 3 dpf normal 2.10448 SRR1565813 brain normal 2.09323 SRR516121 skin male and 3.5 year 2.09002 SRR1188160 embryo Insulin 4 hpi 1.9987400000000002 SRR610741 3 dpf express Ras 1.95433 SRR1562528 eye normal 1.9205 SRR1291417 5 dpi injected marinum 1.9177799999999998 SRR1562532 spleen normal 1.87805 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.8577 SRR1565811 brain normal 1.85631 SRR1565815 brain normal 1.8482900000000002 SRR1035984 13 hpf normal 1.8290099999999998 SRR527833 5 dpf normal 1.8071 SRR065197 3 dpf U1C knockout 1.7789700000000002 SRR516135 skin male and 5 month 1.77463 SRR1534350 larvae 5 ug/l BDE47 treatment 1.7529599999999999 SRR1565805 brain normal 1.74433 SRR535849 larvae normal 1.73403 SRR1565809 brain normal 1.6973 SRR1565819 brain normal 1.6843299999999999 ERR594417 retina normal 1.6597099999999998 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.62659 ERR594418 retina transgenic flk1 and develop tumors 1.62325 SRR516129 skin male and 5 month 1.61313 SRR527834 head normal 1.59886 SRR535848 larvae hoxb1b mut 1.56345 SRR1534349 larvae DMSO vehicle 1.56018 SRR1562530 liver normal 1.52915 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.52809 SRR1565807 brain normal 1.4871299999999998 SRR1565817 brain normal 1.42198 SRR1562533 testis normal 1.41519 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.39834 SRR1004787 larvae impdh1a morpholino 1.36311 SRR1534351 larvae 500 ug/l BDE47 treatment 1.31198 SRR535851 larvae normal 1.29835 SRR519742 4 dpf VD3 treatment 1.23252 SRR535847 larvae normal 1.2037 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.16709 SRR1562531 muscle normal 1.14152 SRR535852 larvae hoxb1b mut 1.1409799999999999 SRR519747 6 dpf VD3 treatment 1.12416 SRR633550 larvae exposed to hypoxia stress 1.09217 SRR633516 larvae normal 1.08213 SRR1004789 larvae impdh2 morpholino 1.07485 SRR535850 larvae hoxb1b mut 1.0745799999999999 SRR519722 4 dpf FETOH treatment 1.0600399999999999 SRR519752 7 dpf VD3 treatment 0.973684 SRR1021215 sphere stage Mzeomesa 0.9623659999999999 SRR519727 6 dpf FETOH treatment 0.955691 SRR633544 larvae exposed to cold stress 0.9324950000000001 SRR519732 7 dpf FETOH treatment 0.9107569999999999 SRR1647681 head kidney SVCV treatment 0.86434 SRR1647680 head kidney SVCV treatment 0.855325 ERR594416 retina transgenic flk1 0.8532270000000001 SRR1647684 spleen SVCV treatment 0.8129850000000001 SRR748491 germ ring normal 0.790272 SRR1035239 liver transgenic mCherry control 0.755804 SRR065196 3 dpf normal 0.7490600000000001 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.71324 SRR726542 5 dpf infection with control 0.62241 SRR1647682 spleen normal 0.6066060000000001 SRR1647683 spleen SVCV treatment 0.553002 SRR726540 5 dpf normal 0.489117 SRR1021213 sphere stage normal 0.41918999999999995 SRR891511 brain normal 0.353919 SRR1647679 head kidney normal 0.32016999999999995 SRR372791 dome normal 0.313936 SRR1035237 liver transgenic UHRF1 0.30598400000000003 SRR726541 5 dpf infection with Mycobacterium marinum 0.254786 SRR748489 egg normal 0.24939899999999998 SRR527835 tail normal 0.22524299999999997 SRR1562529 intestine and pancreas normal 0.142707 SRR800046 sphere stage 5azaCyD treatment 0.13174 SRR748488 sperm normal 0.105348 SRR1039573 gastrointestinal diet 0.75 NPM 0.101217 SRR1039571 gastrointestinal diet 0.1 NPM 0.0703661 SRR800043 sphere stage normal 0.0668134 SRR1621206 embryo normal 0.011848200000000001 SRR372787 2-4 cell normal 0.0109102 SRR800049 sphere stage control treatment 1.4711099999999999e-05