sample tissue condition fpkm SRR1035237 liver transgenic UHRF1 11.0051 SRR1035239 liver transgenic mCherry control 10.7586 SRR1562530 liver normal 8.71425 ERR023146 head kidney normal 3.2741 SRR891504 liver normal 3.01051 SRR1562529 intestine and pancreas normal 1.47803 SRR1647684 spleen SVCV treatment 1.42569 SRR1647683 spleen SVCV treatment 1.4174 SRR700534 heart control morpholino 1.14799 SRR1647682 spleen normal 1.0222799999999999 SRR1562532 spleen normal 0.877194 SRR1039571 gastrointestinal diet 0.1 NPM 0.855991 SRR1648856 brain normal 0.8165979999999999 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.764083 SRR1647681 head kidney SVCV treatment 0.7603340000000001 SRR1205154 5dpf transgenic sqET20 0.753733 ERR023145 heart normal 0.6935020000000001 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.680534 SRR797908 embryo normal 0.679721 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.664802 SRR1523211 embryo control morpholino 0.6186590000000001 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.605771 SRR658541 6 somite normal 0.603712 SRR1167756 embryo mpeg1 morpholino 0.581505 SRR797911 embryo prdm1-/- 0.569684 SRR1028004 head normal 0.54927 SRR700537 heart Gata4 morpholino 0.51247 SRR749515 24 hpf eif3ha morphant 0.510071 SRR527836 24hpf normal 0.508408 SRR658543 6 somite Gata5 morphan 0.506282 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.5024029999999999 SRR831692 embryo normal 0.496493 ERR023143 swim bladder normal 0.48639099999999996 SRR519717 2 dpf FETOH treatment 0.450545 SRR1039573 gastrointestinal diet 0.75 NPM 0.44747700000000007 SRR519727 6 dpf FETOH treatment 0.446245 SRR1342216 embryo norml 0.444791 SRR1167753 embryo bacterial infection 0.443684 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.44273500000000005 SRR519732 7 dpf FETOH treatment 0.436121 SRR610742 3 dpf express NICD 0.429238 SRR1342217 embryo infection with Mycobacterium marinum 0.42634099999999997 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.421717 SRR519742 4 dpf VD3 treatment 0.421066 SRR1028002 head normal 0.420926 SRR519737 2 dpf VD3 treatment 0.41918500000000003 SRR1188156 embryo Control PBS 4 hpi 0.41757799999999995 SRR1004785 larvae normal 0.40881799999999996 SRR610740 3 dpf normal 0.406931 SRR658535 bud Gata5 morphant 0.39972199999999997 SRR658545 6 somite Gata6 morphant 0.394389 SRR1648855 brain normal 0.385846 SRR797914 embryo pbx2/4-MO 0.38090999999999997 SRR658539 bud Gata5/6 morphant 0.378705 SRR535851 larvae normal 0.378214 SRR1648854 brain normal 0.37335 SRR942769 embryo myd88+/+ 0.372931 SRR519722 4 dpf FETOH treatment 0.368247 SRR1167752 embryo normal 0.363712 SRR1562533 testis normal 0.357209 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.355373 SRR535913 larvae krox mut 0.355224 SRR527835 tail normal 0.355106 SRR1291417 5 dpi injected marinum 0.350923 SRR749514 24 hpf normal 0.347082 SRR630463 5 dpf normal 0.346852 SRR1188148 embryo Control PBS 0.5 hpi 0.343649 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.33876300000000004 SRR1523214 embryo glut12 morpholino 0.338565 SRR1647679 head kidney normal 0.338154 SRR1708345 embryo SIBAS 0.337433 SRR1028003 head normal 0.335102 SRR1035978 13 hpf rx3-/- 0.32966 SRR776508 embryo miR-146 knockdown 0.325787 SRR527844 24hpf normal 0.32560700000000004 SRR633516 larvae normal 0.324558 SRR535847 larvae normal 0.32252600000000003 SRR658547 6 somite Gata5/6 morphant 0.322511 SRR1299125 caudal fin Half day time after treatment 0.31909499999999996 SRR610741 3 dpf express Ras 0.317728 SRR1534349 larvae DMSO vehicle 0.306223 SRR1708343 embryo MUTAS 0.302327 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.298035 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.290686 SRR1647680 head kidney SVCV treatment 0.29062 SRR527840 24hpf normal 0.290245 SRR372798 28 hpf normal 0.289665 SRR519747 6 dpf VD3 treatment 0.289575 SRR065197 3 dpf U1C knockout 0.28931100000000004 SRR372802 5 dpf normal 0.287673 SRR630464 5 dpf injected epidermidis 0.281965 SRR372800 2 dpf normal 0.280589 SRR801555 embryo RPS19 morpholino 0.27986 SRR1004786 larvae control morpholino 0.27981100000000003 SRR535849 larvae normal 0.26924699999999996 SRR535890 larvae normal 0.269154 SRR726540 5 dpf normal 0.267546 SRR527834 head normal 0.263682 SRR633550 larvae exposed to hypoxia stress 0.260776 SRR1534350 larvae 5 ug/l BDE47 treatment 0.257413 SRR527832 16-36 hpf normal 0.25455 SRR594771 endothelium normal 0.252745 SRR776507 embryo normal 0.251286 SRR065196 3 dpf normal 0.24683899999999998 SRR658533 bud normal 0.245254 SRR372796 bud normal 0.240756 ERR023144 brain normal 0.23445 SRR1004789 larvae impdh2 morpholino 0.233033 SRR535986 larvae nhsl1b mut 0.231527 SRR726542 5 dpf infection with control 0.231008 SRR1291414 5 dpi normal 0.22797199999999998 SRR1035984 13 hpf normal 0.22710999999999998 SRR633544 larvae exposed to cold stress 0.21404299999999998 SRR942764 embryo myd88-/- 0.21058200000000002 SRR1104059 heart kctd10 mut 0.21009499999999998 SRR535850 larvae hoxb1b mut 0.20336700000000002 SRR1708344 embryo MUTPS 0.201769 SRR1562528 eye normal 0.200705 SRR535943 larvae vangl mut 0.197848 SRR1188152 embryo Insulin 0.5 hpi 0.193616 SRR1299124 caudal fin Zero day time after treatment 0.193182 SRR535978 larvae normal 0.193172 SRR519752 7 dpf VD3 treatment 0.19253599999999998 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.189437 SRR1104058 heart normal 0.185643 SRR801556 embryo RPS19 and p53 morpholino 0.184384 SRR1708346 embryo SIBPS 0.183687 SRR1004787 larvae impdh1a morpholino 0.18036300000000002 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.180234 SRR1005529 embryo control morpholino 0.179263 SRR801554 embryo control morpholino 0.178993 SRR1167762 embryo ptpn6 morpholino 0.178024 SRR535926 larvae normal 0.17298 SRR1188160 embryo Insulin 4 hpi 0.171485 SRR592702 pineal gland normal 0.170855 SRR658537 bud Gata6 morphant 0.169792 SRR1569491 embryo normal 0.16638499999999998 SRR535852 larvae hoxb1b mut 0.16158699999999998 SRR726541 5 dpf infection with Mycobacterium marinum 0.158189 SRR514028 retina control morpholino 0.154521 SRR1342218 embryo marco morpholino 0.152719 SRR1299129 caudal fin Seven days time after treatment 0.14591099999999999 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.134628 SRR516123 skin male and 3.5 year 0.133661 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.130712 SRR800045 muscle normal 0.125414 SRR776509 embryo Salmonella infected 0.12394200000000001 SRR038627 embryo control morpholino 0.12072100000000001 SRR527833 5 dpf normal 0.119799 SRR038624 embryo traf6 morpholino and bacterial infection 0.114184 SRR038626 embryo control morpholino and bacterial infection 0.11166500000000001 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.111018 SRR1562531 muscle normal 0.10411600000000001 SRR1004788 larvae impdh1b morpholino 0.10099999999999999 SRR1299126 caudal fin One day time after treatment 0.0983968 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.09762219999999999 SRR1005530 embryo RPL11 morpholino 0.0956764 SRR941749 anterior pectoral fin normal 0.09170779999999999 SRR1569495 embryo normal 0.0875912 SRR594769 blood normal 0.0864442 SRR891510 muscle normal 0.08578630000000001 SRR592701 pineal gland normal 0.08028880000000001 SRR516133 skin male and 5 month 0.07720679999999999 SRR941753 posterior pectoral fin normal 0.0751877 SRR516125 skin male and 3.5 year 0.0749346 SRR592700 pineal gland normal 0.07454039999999999 SRR1048061 pineal gland dark 0.0743058 SRR516126 skin male and 5 month 0.0740564 SRR1299127 caudal fin Two days time after treatment 0.0728283 SRR1565809 brain normal 0.06715039999999999 SRR516127 skin male and 5 month 0.0660413 SRR891511 brain normal 0.0655679 ERR594418 retina transgenic flk1 and develop tumors 0.0608095 SRR516132 skin male and 5 month 0.056720299999999994 SRR1565805 brain normal 0.0565625 SRR957180 heart 7 days after heart tip amputation 0.0537303 SRR535848 larvae hoxb1b mut 0.0530049 SRR1534351 larvae 500 ug/l BDE47 treatment 0.052500599999999994 SRR1565819 brain normal 0.050995599999999995 SRR1299128 caudal fin Three days time after treatment 0.0491351 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.0485571 SRR516124 skin male and 3.5 year 0.047614800000000006 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.0446723 SRR592698 pineal gland normal 0.044004900000000007 SRR1565815 brain normal 0.0427371 SRR1565817 brain normal 0.0384413 ERR594416 retina transgenic flk1 0.033489099999999994 SRR1565811 brain normal 0.0315506 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.0306807 SRR748488 sperm normal 0.0306557 SRR1565813 brain normal 0.023903900000000002 SRR1565807 brain normal 0.020350099999999996 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.0117411 SRR1021213 sphere stage normal 0.00960075 ERR594417 retina normal 0.00849491 SRR1621206 embryo normal 0.00301951 SRR1049814 256 cell normal 0.00217369