sample tissue condition fpkm SRR1205154 5dpf transgenic sqET20 14.2629 ERR023144 brain normal 13.1088 SRR1048061 pineal gland dark 12.3771 ERR594417 retina normal 12.0856 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 11.1469 SRR1205160 5dpf transgenic sqET20 and GFP+ 10.8826 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 10.2735 SRR1004786 larvae control morpholino 10.015 SRR630463 5 dpf normal 9.68285 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 9.677480000000001 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 9.59149 SRR658541 6 somite normal 9.47056 SRR594771 endothelium normal 9.00128 SRR1167756 embryo mpeg1 morpholino 8.96497 SRR594769 blood normal 8.88792 SRR658547 6 somite Gata5/6 morphant 8.76105 SRR749514 24 hpf normal 8.54837 SRR1167752 embryo normal 8.51848 SRR592703 pineal gland normal 8.3123 SRR1342218 embryo marco morpholino 8.14353 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 8.0138 SRR1048059 pineal gland light 8.00872 SRR535913 larvae krox mut 7.66724 SRR592702 pineal gland normal 7.56425 SRR658543 6 somite Gata5 morphan 7.552169999999999 SRR776509 embryo Salmonella infected 7.526560000000001 SRR527844 24hpf normal 7.398630000000001 SRR630464 5 dpf injected epidermidis 7.350219999999999 ERR594416 retina transgenic flk1 7.25723 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 7.19675 SRR1028004 head normal 7.10393 SRR065197 3 dpf U1C knockout 7.00065 SRR1523214 embryo glut12 morpholino 6.99753 SRR1004788 larvae impdh1b morpholino 6.80198 SRR535890 larvae normal 6.78855 SRR776508 embryo miR-146 knockdown 6.71506 SRR592700 pineal gland normal 6.688969999999999 SRR1028002 head normal 6.6452800000000005 SRR749515 24 hpf eif3ha morphant 6.5975600000000005 SRR658545 6 somite Gata6 morphant 6.43346 SRR1188160 embryo Insulin 4 hpi 6.41397 SRR1342216 embryo norml 6.38393 SRR797911 embryo prdm1-/- 6.33573 SRR535943 larvae vangl mut 6.32916 SRR1028003 head normal 6.32908 SRR1291414 5 dpi normal 6.25397 SRR658537 bud Gata6 morphant 6.2402 SRR535851 larvae normal 6.22767 SRR1523211 embryo control morpholino 6.21583 SRR797914 embryo pbx2/4-MO 6.0576099999999995 SRR535850 larvae hoxb1b mut 6.00983 SRR527832 16-36 hpf normal 6.00033 SRR1562528 eye normal 5.98318 ERR594418 retina transgenic flk1 and develop tumors 5.97576 SRR1167753 embryo bacterial infection 5.97403 SRR658535 bud Gata5 morphant 5.87341 SRR797917 embryo pbx2/4-MO and prdm1-/- 5.86843 SRR1167757 embryo mpeg1 morpholino and bacterial infection 5.79189 SRR776510 embryo Salmonella infected and miR-146 knockdown 5.78296 SRR658533 bud normal 5.7660599999999995 SRR1647683 spleen SVCV treatment 5.7144699999999995 SRR941749 anterior pectoral fin normal 5.7053199999999995 SRR592699 pineal gland normal 5.67253 SRR065196 3 dpf normal 5.64066 SRR1004787 larvae impdh1a morpholino 5.63718 SRR941753 posterior pectoral fin normal 5.60659 SRR535847 larvae normal 5.59164 SRR535848 larvae hoxb1b mut 5.54471 SRR1104058 heart normal 5.53296 SRR1004785 larvae normal 5.47898 SRR1004789 larvae impdh2 morpholino 5.47115 SRR372798 28 hpf normal 5.42556 SRR592701 pineal gland normal 5.40952 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 5.398540000000001 SRR1562532 spleen normal 5.29772 SRR1647684 spleen SVCV treatment 5.24769 SRR535849 larvae normal 5.21497 SRR1104059 heart kctd10 mut 5.1894599999999995 SRR700537 heart Gata4 morpholino 5.10069 SRR1291417 5 dpi injected marinum 5.02954 SRR797908 embryo normal 4.96092 SRR516126 skin male and 5 month 4.954 SRR610740 3 dpf normal 4.9152 SRR372800 2 dpf normal 4.80848 SRR1647680 head kidney SVCV treatment 4.78225 SRR942769 embryo myd88+/+ 4.75712 SRR658539 bud Gata5/6 morphant 4.67991 SRR038627 embryo control morpholino 4.6706900000000005 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 4.61517 SRR776507 embryo normal 4.57724 SRR592698 pineal gland normal 4.57417 SRR831692 embryo normal 4.56551 SRR610741 3 dpf express Ras 4.5602800000000006 SRR1342217 embryo infection with Mycobacterium marinum 4.47276 SRR535926 larvae normal 4.4484699999999995 SRR516127 skin male and 5 month 4.37364 SRR1188152 embryo Insulin 0.5 hpi 4.32683 SRR726541 5 dpf infection with Mycobacterium marinum 4.30524 SRR1035981 13 hpf rx3+/+ or rx3+/- 4.22609 SRR516132 skin male and 5 month 4.21667 SRR516121 skin male and 3.5 year 4.153969999999999 SRR891511 brain normal 4.12909 SRR535986 larvae nhsl1b mut 4.11538 SRR610742 3 dpf express NICD 4.11066 SRR1647681 head kidney SVCV treatment 4.01963 SRR1534350 larvae 5 ug/l BDE47 treatment 4.00595 SRR1647682 spleen normal 3.9855400000000003 SRR516131 skin male and 5 month 3.93128 SRR1569495 embryo normal 3.88395 SRR372802 5 dpf normal 3.8547 SRR700534 heart control morpholino 3.8137800000000004 SRR1647679 head kidney normal 3.80597 SRR516122 skin male and 3.5 year 3.8039699999999996 SRR942764 embryo myd88-/- 3.79471 SRR1167762 embryo ptpn6 morpholino 3.7383 SRR535978 larvae normal 3.72595 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.6484900000000002 SRR1299124 caudal fin Zero day time after treatment 3.61084 SRR1562531 muscle normal 3.6031199999999997 SRR527834 head normal 3.58075 SRR1648855 brain normal 3.4719800000000003 SRR1188156 embryo Control PBS 4 hpi 3.43825 SRR1708343 embryo MUTAS 3.4361900000000003 SRR1299129 caudal fin Seven days time after treatment 3.41126 SRR516123 skin male and 3.5 year 3.3561300000000003 SRR527840 24hpf normal 3.32231 SRR1562530 liver normal 3.3092900000000003 SRR633550 larvae exposed to hypoxia stress 3.2372400000000003 SRR726540 5 dpf normal 3.23507 SRR633516 larvae normal 3.23135 SRR1562533 testis normal 3.1251 SRR535852 larvae hoxb1b mut 2.94137 SRR1534349 larvae DMSO vehicle 2.90371 SRR1569491 embryo normal 2.87488 SRR1299126 caudal fin One day time after treatment 2.85091 SRR1562529 intestine and pancreas normal 2.82199 SRR1708345 embryo SIBAS 2.81597 SRR1035978 13 hpf rx3-/- 2.76483 SRR1299128 caudal fin Three days time after treatment 2.72039 SRR957181 heart normal 2.70824 SRR801556 embryo RPS19 and p53 morpholino 2.68863 SRR519747 6 dpf VD3 treatment 2.6802900000000003 SRR527836 24hpf normal 2.6650400000000003 SRR957180 heart 7 days after heart tip amputation 2.6453900000000004 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.63537 SRR527833 5 dpf normal 2.58415 SRR516125 skin male and 3.5 year 2.5794900000000003 SRR372796 bud normal 2.5774 SRR1534351 larvae 500 ug/l BDE47 treatment 2.5142700000000002 SRR726542 5 dpf infection with control 2.48205 SRR038626 embryo control morpholino and bacterial infection 2.4811400000000003 SRR1648854 brain normal 2.4767 SRR1035984 13 hpf normal 2.4683599999999997 SRR519717 2 dpf FETOH treatment 2.4394099999999996 SRR516135 skin male and 5 month 2.42958 SRR519727 6 dpf FETOH treatment 2.38879 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.33732 SRR516124 skin male and 3.5 year 2.2821599999999997 SRR038624 embryo traf6 morpholino and bacterial infection 2.2612900000000002 SRR519737 2 dpf VD3 treatment 2.2364 SRR519732 7 dpf FETOH treatment 2.22634 SRR519752 7 dpf VD3 treatment 2.1684799999999997 SRR516129 skin male and 5 month 2.0844 SRR1565809 brain normal 2.0836200000000002 SRR516134 skin male and 5 month 2.00612 SRR038625 embryo traf6 morpholino 1.9686400000000002 SRR1299127 caudal fin Two days time after treatment 1.96281 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.9604099999999998 SRR1565819 brain normal 1.9555 SRR801555 embryo RPS19 morpholino 1.94232 SRR519722 4 dpf FETOH treatment 1.9356799999999998 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.93035 ERR023145 heart normal 1.86265 SRR514030 retina id2a morpholino 1.8461 SRR1565815 brain normal 1.83952 SRR1565811 brain normal 1.7911 SRR514028 retina control morpholino 1.78371 SRR516130 skin male and 5 month 1.63765 SRR372793 shield normal 1.6044 SRR1005530 embryo RPL11 morpholino 1.59979 SRR1565805 brain normal 1.59422 SRR516133 skin male and 5 month 1.55908 SRR519742 4 dpf VD3 treatment 1.54348 SRR800046 sphere stage 5azaCyD treatment 1.54136 SRR1708346 embryo SIBPS 1.53165 SRR1565807 brain normal 1.51286 SRR1299125 caudal fin Half day time after treatment 1.49114 ERR023143 swim bladder normal 1.45458 SRR1005529 embryo control morpholino 1.44601 SRR801554 embryo control morpholino 1.44381 SRR1188148 embryo Control PBS 0.5 hpi 1.42458 SRR1565817 brain normal 1.42327 SRR891504 liver normal 1.37333 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.33575 SRR516128 skin male and 5 month 1.32735 ERR023146 head kidney normal 1.28945 SRR1708344 embryo MUTPS 1.27931 SRR633544 larvae exposed to cold stress 1.22963 SRR1565813 brain normal 1.13365 SRR891495 heart normal 1.071 SRR1648856 brain normal 0.9195059999999999 SRR800049 sphere stage control treatment 0.9012370000000001 SRR1021215 sphere stage Mzeomesa 0.8027890000000001 SRR527835 tail normal 0.7831739999999999 SRR1035239 liver transgenic mCherry control 0.732295 SRR748491 germ ring normal 0.723012 SRR1039571 gastrointestinal diet 0.1 NPM 0.6671 SRR800043 sphere stage normal 0.645524 SRR891510 muscle normal 0.5813699999999999 SRR1035237 liver transgenic UHRF1 0.572365 SRR372791 dome normal 0.5286489999999999 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.487378 SRR1021213 sphere stage normal 0.327127 SRR748488 sperm normal 0.289008 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.115704 SRR1049814 256 cell normal 0.05600499999999999 SRR372787 2-4 cell normal 0.0526133 SRR372789 1K cell normal 0.0467998 SRR1621206 embryo normal 0.0255071