sample tissue condition fpkm SRR514028 retina control morpholino 78.0915 SRR748489 egg normal 71.4978 SRR514030 retina id2a morpholino 56.2667 SRR535978 larvae normal 42.0997 SRR1299126 caudal fin One day time after treatment 40.6975 SRR1569491 embryo normal 40.2279 SRR527840 24hpf normal 38.6931 SRR1299125 caudal fin Half day time after treatment 38.1626 SRR1299127 caudal fin Two days time after treatment 35.2535 SRR594771 endothelium normal 34.5506 SRR527836 24hpf normal 34.3607 ERR023144 brain normal 34.0053 SRR527844 24hpf normal 32.6519 SRR658533 bud normal 32.6452 SRR535986 larvae nhsl1b mut 31.3566 SRR1299129 caudal fin Seven days time after treatment 30.0173 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 29.9238 SRR658545 6 somite Gata6 morphant 29.8626 SRR658547 6 somite Gata5/6 morphant 28.6125 SRR1299128 caudal fin Three days time after treatment 28.3948 SRR748491 germ ring normal 27.4065 ERR023146 head kidney normal 27.3585 SRR1708345 embryo SIBAS 26.8725 SRR776509 embryo Salmonella infected 25.1339 SRR658537 bud Gata6 morphant 25.0009 SRR1035978 13 hpf rx3-/- 24.930999999999997 SRR658541 6 somite normal 24.7949 ERR023143 swim bladder normal 24.5984 SRR1299124 caudal fin Zero day time after treatment 24.1743 SRR594769 blood normal 24.144000000000002 SRR1708346 embryo SIBPS 24.0313 SRR1021215 sphere stage Mzeomesa 23.2623 SRR1004786 larvae control morpholino 23.1505 SRR658535 bud Gata5 morphant 23.0706 SRR658539 bud Gata5/6 morphant 22.9043 SRR658543 6 somite Gata5 morphan 22.8134 SRR776507 embryo normal 22.245 SRR1021213 sphere stage normal 22.0534 SRR516121 skin male and 3.5 year 21.7753 SRR1004788 larvae impdh1b morpholino 21.7023 SRR1004785 larvae normal 21.2656 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 20.0706 SRR630464 5 dpf injected epidermidis 19.9183 SRR630463 5 dpf normal 19.8445 SRR1035981 13 hpf rx3+/+ or rx3+/- 19.7002 SRR516123 skin male and 3.5 year 19.4563 SRR776510 embryo Salmonella infected and miR-146 knockdown 18.9877 SRR1005529 embryo control morpholino 18.7302 SRR801554 embryo control morpholino 18.7017 SRR516127 skin male and 5 month 18.0734 SRR516125 skin male and 3.5 year 18.0392 SRR776508 embryo miR-146 knockdown 17.9565 SRR1291417 5 dpi injected marinum 17.8153 SRR700534 heart control morpholino 17.288 SRR527833 5 dpf normal 17.1917 SRR749515 24 hpf eif3ha morphant 16.9405 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 16.7819 SRR516122 skin male and 3.5 year 16.7571 SRR1035984 13 hpf normal 16.482 ERR023145 heart normal 16.2531 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 16.2237 SRR1708344 embryo MUTPS 15.7154 SRR1342218 embryo marco morpholino 15.309000000000001 SRR1205154 5dpf transgenic sqET20 15.2284 SRR797908 embryo normal 15.0272 SRR516134 skin male and 5 month 14.94 SRR516131 skin male and 5 month 14.8945 SRR1167763 embryo ptpn6 morpholino and bacterial infection 14.8582 SRR527835 tail normal 14.8306 SRR797914 embryo pbx2/4-MO 14.796 SRR801555 embryo RPS19 morpholino 14.665 SRR1005530 embryo RPL11 morpholino 14.6296 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 14.4573 SRR516133 skin male and 5 month 14.4563 SRR1342217 embryo infection with Mycobacterium marinum 14.1215 SRR1205160 5dpf transgenic sqET20 and GFP+ 14.112 SRR1291414 5 dpi normal 13.8638 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 13.8288 SRR797911 embryo prdm1-/- 13.7607 SRR891495 heart normal 13.6801 SRR1167753 embryo bacterial infection 13.4471 SRR700537 heart Gata4 morpholino 13.4077 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 13.2344 SRR749514 24 hpf normal 13.0633 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 12.9878 SRR1167752 embryo normal 12.7683 SRR942769 embryo myd88+/+ 12.3287 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 12.2082 SRR1167762 embryo ptpn6 morpholino 12.0586 SRR516130 skin male and 5 month 11.985999999999999 SRR1342216 embryo norml 11.9839 SRR1167756 embryo mpeg1 morpholino 11.9112 SRR535943 larvae vangl mut 11.88 SRR516126 skin male and 5 month 11.7482 SRR527834 head normal 11.6869 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 11.5448 SRR1708343 embryo MUTAS 11.2715 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 11.2257 SRR1104059 heart kctd10 mut 11.1545 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 10.9274 SRR1104058 heart normal 10.7452 SRR1562531 muscle normal 10.7392 SRR1004787 larvae impdh1a morpholino 10.3785 SRR797917 embryo pbx2/4-MO and prdm1-/- 10.288 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 10.2618 SRR1569495 embryo normal 10.0644 SRR886455 128 cell 4-thio-UTP metabolic labeling 10.0168 SRR1647683 spleen SVCV treatment 9.97918 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 9.84176 SRR535926 larvae normal 9.73269 SRR1167757 embryo mpeg1 morpholino and bacterial infection 9.34967 SRR801556 embryo RPS19 and p53 morpholino 9.17408 SRR1562533 testis normal 9.16168 SRR516124 skin male and 3.5 year 9.113669999999999 SRR1565805 brain normal 9.10858 SRR942764 embryo myd88-/- 9.06373 SRR1523214 embryo glut12 morpholino 9.001660000000001 SRR1523211 embryo control morpholino 8.89966 SRR1565807 brain normal 8.89845 SRR1028004 head normal 8.631110000000001 SRR1028002 head normal 8.5689 SRR516132 skin male and 5 month 8.51673 SRR516128 skin male and 5 month 8.47728 SRR1534350 larvae 5 ug/l BDE47 treatment 7.849310000000001 SRR535890 larvae normal 7.80341 SRR831692 embryo normal 7.790939999999999 SRR886457 512 cell 4-thio-UTP metabolic labeling 7.76513 ERR594417 retina normal 7.53499 SRR1565809 brain normal 7.498239999999999 SRR592699 pineal gland normal 7.48929 SRR1188160 embryo Insulin 4 hpi 7.371560000000001 SRR1565811 brain normal 7.30005 SRR516129 skin male and 5 month 7.276660000000001 SRR1647682 spleen normal 7.1277 SRR1565813 brain normal 7.0090699999999995 ERR594416 retina transgenic flk1 6.92961 SRR1035237 liver transgenic UHRF1 6.87237 SRR527832 16-36 hpf normal 6.83913 SRR1188148 embryo Control PBS 0.5 hpi 6.70757 SRR1647684 spleen SVCV treatment 6.68463 SRR1565819 brain normal 6.677010000000001 SRR1562528 eye normal 6.46457 SRR748490 1 kcell normal 6.45484 SRR1188152 embryo Insulin 0.5 hpi 6.35456 SRR535913 larvae krox mut 6.304069999999999 SRR1565815 brain normal 6.19499 SRR941749 anterior pectoral fin normal 6.19142 SRR610742 3 dpf express NICD 6.17786 SRR038627 embryo control morpholino 6.01537 SRR065196 3 dpf normal 5.9685 SRR886456 256 cell 4-thio-UTP metabolic labeling 5.91887 SRR1562532 spleen normal 5.63518 SRR038624 embryo traf6 morpholino and bacterial infection 5.5346400000000004 SRR1565817 brain normal 5.49231 SRR1562529 intestine and pancreas normal 5.43853 SRR1188156 embryo Control PBS 4 hpi 5.32083 SRR1039571 gastrointestinal diet 0.1 NPM 5.29143 SRR1534351 larvae 500 ug/l BDE47 treatment 5.2075 SRR1647681 head kidney SVCV treatment 5.17582 SRR610740 3 dpf normal 4.86511 SRR1035239 liver transgenic mCherry control 4.847580000000001 SRR516135 skin male and 5 month 4.79089 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 4.66845 SRR1048061 pineal gland dark 4.62049 SRR1534349 larvae DMSO vehicle 4.57451 SRR726540 5 dpf normal 4.28941 SRR592698 pineal gland normal 4.20659 SRR1039573 gastrointestinal diet 0.75 NPM 4.20595 ERR594418 retina transgenic flk1 and develop tumors 3.96098 SRR592702 pineal gland normal 3.87797 SRR800037 egg normal 3.86743 SRR535851 larvae normal 3.79885 SRR038625 embryo traf6 morpholino 3.6041199999999995 SRR535850 larvae hoxb1b mut 3.54231 SRR726541 5 dpf infection with Mycobacterium marinum 3.50155 SRR592700 pineal gland normal 3.42562 SRR1647680 head kidney SVCV treatment 3.26365 SRR941753 posterior pectoral fin normal 3.20625 SRR726542 5 dpf infection with control 2.97803 SRR891512 blood normal 2.9007099999999997 SRR1028003 head normal 2.8723400000000003 SRR1048059 pineal gland light 2.78721 SRR038626 embryo control morpholino and bacterial infection 2.7197 SRR1562530 liver normal 2.55723 SRR800046 sphere stage 5azaCyD treatment 2.53566 SRR610741 3 dpf express Ras 2.476 SRR891510 muscle normal 2.38826 SRR519717 2 dpf FETOH treatment 2.32242 SRR535852 larvae hoxb1b mut 2.21255 SRR535848 larvae hoxb1b mut 1.9286400000000001 SRR1004789 larvae impdh2 morpholino 1.80604 SRR519747 6 dpf VD3 treatment 1.67638 SRR592703 pineal gland normal 1.56861 SRR535849 larvae normal 1.48404 SRR1647679 head kidney normal 1.3302200000000002 SRR633516 larvae normal 1.3300100000000001 SRR519752 7 dpf VD3 treatment 1.14791 SRR800043 sphere stage normal 1.10341 SRR592701 pineal gland normal 1.02501 SRR519742 4 dpf VD3 treatment 0.805664 SRR535847 larvae normal 0.7952739999999999 SRR065197 3 dpf U1C knockout 0.7414069999999999 SRR519737 2 dpf VD3 treatment 0.224504 SRR519727 6 dpf FETOH treatment 0.151329 SRR519722 4 dpf FETOH treatment 0.0993903 SRR519732 7 dpf FETOH treatment 0.08800419999999999 SRR957181 heart normal 0.0646616 SRR957180 heart 7 days after heart tip amputation 0.0566961 SRR1648854 brain normal 0.0388577 SRR372796 bud normal 0.031357499999999996 SRR372793 shield normal 0.019566099999999996 SRR1621206 embryo normal 0.0111181 SRR891511 brain normal 0.0083996 SRR800049 sphere stage control treatment 0.00472299