sample tissue condition fpkm SRR1299125 caudal fin Half day time after treatment 113.445 SRR1299129 caudal fin Seven days time after treatment 100.81200000000001 SRR1205160 5dpf transgenic sqET20 and GFP+ 100.365 SRR1299124 caudal fin Zero day time after treatment 99.8685 SRR1299127 caudal fin Two days time after treatment 95.8975 ERR023146 head kidney normal 95.6136 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 93.7372 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 87.6273 SRR1299126 caudal fin One day time after treatment 82.0339 ERR023143 swim bladder normal 72.146 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 58.2698 SRR516123 skin male and 3.5 year 57.4665 SRR1299128 caudal fin Three days time after treatment 54.6808 SRR516125 skin male and 3.5 year 47.5883 SRR516122 skin male and 3.5 year 44.7606 SRR516121 skin male and 3.5 year 40.5339 SRR941749 anterior pectoral fin normal 37.7609 SRR516124 skin male and 3.5 year 36.5841 SRR516133 skin male and 5 month 35.6997 SRR516134 skin male and 5 month 34.852 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 34.8451 SRR516129 skin male and 5 month 33.5509 SRR1534351 larvae 500 ug/l BDE47 treatment 32.0553 SRR372802 5 dpf normal 29.8475 SRR372793 shield normal 27.3823 SRR516131 skin male and 5 month 26.6593 SRR1167763 embryo ptpn6 morpholino and bacterial infection 26.5289 SRR941753 posterior pectoral fin normal 25.27 SRR1708344 embryo MUTPS 24.7533 SRR658547 6 somite Gata5/6 morphant 23.9138 SRR516128 skin male and 5 month 23.5019 SRR535978 larvae normal 22.834 ERR023145 heart normal 22.4211 SRR1167753 embryo bacterial infection 21.8687 SRR527834 head normal 21.6959 SRR658539 bud Gata5/6 morphant 21.3784 SRR658535 bud Gata5 morphant 21.3387 SRR1708346 embryo SIBPS 21.0035 SRR1291417 5 dpi injected marinum 20.8882 SRR630464 5 dpf injected epidermidis 20.8321 SRR1534350 larvae 5 ug/l BDE47 treatment 20.6051 SRR1028002 head normal 20.185 SRR658533 bud normal 19.6878 SRR1167756 embryo mpeg1 morpholino 18.9315 SRR1562528 eye normal 18.9212 SRR1648856 brain normal 18.89 SRR516130 skin male and 5 month 18.6327 SRR1291414 5 dpi normal 17.4953 SRR630463 5 dpf normal 17.2853 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 17.1652 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 17.1389 SRR610741 3 dpf express Ras 16.9982 SRR1534349 larvae DMSO vehicle 16.7214 SRR1342218 embryo marco morpholino 16.6559 SRR527836 24hpf normal 15.6076 SRR1523211 embryo control morpholino 15.5508 SRR658543 6 somite Gata5 morphan 15.5136 SRR1167752 embryo normal 15.4672 SRR1028003 head normal 15.2522 SRR1342217 embryo infection with Mycobacterium marinum 15.0619 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 14.992 SRR516132 skin male and 5 month 14.9868 SRR942769 embryo myd88+/+ 14.9077 SRR658545 6 somite Gata6 morphant 14.7221 SRR658537 bud Gata6 morphant 14.5538 SRR658541 6 somite normal 14.2465 SRR372796 bud normal 13.9466 SRR516127 skin male and 5 month 13.9291 SRR1167757 embryo mpeg1 morpholino and bacterial infection 13.8559 SRR1342216 embryo norml 13.7942 SRR749515 24 hpf eif3ha morphant 13.4528 SRR1028004 head normal 13.0317 SRR1647679 head kidney normal 12.7641 SRR1647680 head kidney SVCV treatment 12.7307 SRR942764 embryo myd88-/- 12.5733 SRR527840 24hpf normal 12.5152 SRR1648854 brain normal 12.1788 SRR519732 7 dpf FETOH treatment 12.1068 SRR1188148 embryo Control PBS 0.5 hpi 11.9408 SRR610742 3 dpf express NICD 11.9354 SRR1562531 muscle normal 11.8219 SRR1035978 13 hpf rx3-/- 11.6385 SRR1648855 brain normal 11.3826 SRR700537 heart Gata4 morpholino 11.2572 SRR519752 7 dpf VD3 treatment 11.1458 SRR527833 5 dpf normal 11.1066 SRR519747 6 dpf VD3 treatment 10.8799 SRR1167762 embryo ptpn6 morpholino 10.8501 SRR516135 skin male and 5 month 10.6917 SRR1035981 13 hpf rx3+/+ or rx3+/- 10.6034 SRR776508 embryo miR-146 knockdown 10.5174 SRR749514 24 hpf normal 10.4928 SRR527844 24hpf normal 10.3387 SRR519727 6 dpf FETOH treatment 10.3076 SRR1708345 embryo SIBAS 10.1475 SRR797908 embryo normal 10.1344 SRR516126 skin male and 5 month 10.127 SRR535986 larvae nhsl1b mut 10.1192 SRR535847 larvae normal 10.0036 SRR700534 heart control morpholino 9.909239999999999 SRR797911 embryo prdm1-/- 9.80511 SRR1188152 embryo Insulin 0.5 hpi 9.52949 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 9.46318 SRR610740 3 dpf normal 9.28743 SRR776510 embryo Salmonella infected and miR-146 knockdown 9.09809 SRR1035984 13 hpf normal 9.00119 SRR535852 larvae hoxb1b mut 8.964139999999999 SRR776509 embryo Salmonella infected 8.95358 SRR372800 2 dpf normal 8.937439999999999 SRR776507 embryo normal 8.7085 SRR797917 embryo pbx2/4-MO and prdm1-/- 8.6096 SRR797914 embryo pbx2/4-MO 8.49362 SRR535848 larvae hoxb1b mut 8.48223 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 8.37227 SRR1104058 heart normal 8.32083 SRR038626 embryo control morpholino and bacterial infection 8.281930000000001 SRR1205154 5dpf transgenic sqET20 8.239460000000001 SRR065197 3 dpf U1C knockout 8.21423 SRR535851 larvae normal 8.20294 SRR831692 embryo normal 8.186860000000001 SRR372798 28 hpf normal 7.91746 SRR1188160 embryo Insulin 4 hpi 7.9100399999999995 SRR535849 larvae normal 7.90088 SRR535943 larvae vangl mut 7.4725 SRR726540 5 dpf normal 7.465260000000001 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 7.2348 SRR1647681 head kidney SVCV treatment 7.174930000000001 SRR1523214 embryo glut12 morpholino 7.01485 SRR1708343 embryo MUTAS 6.9443 SRR1188156 embryo Control PBS 4 hpi 6.76175 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 6.536580000000001 SRR535926 larvae normal 6.50831 SRR535850 larvae hoxb1b mut 6.508030000000001 SRR519722 4 dpf FETOH treatment 6.3708599999999995 SRR535890 larvae normal 6.2552900000000005 SRR519742 4 dpf VD3 treatment 6.20047 SRR1004786 larvae control morpholino 5.95124 SRR1004788 larvae impdh1b morpholino 5.85231 SRR535913 larvae krox mut 5.817019999999999 SRR891512 blood normal 5.50548 SRR038627 embryo control morpholino 5.31623 SRR527832 16-36 hpf normal 5.30986 SRR1005529 embryo control morpholino 5.18763 SRR801554 embryo control morpholino 5.17983 SRR633516 larvae normal 5.134440000000001 SRR1562533 testis normal 5.1005 SRR1104059 heart kctd10 mut 4.98776 SRR801555 embryo RPS19 morpholino 4.93609 SRR519717 2 dpf FETOH treatment 4.921069999999999 SRR1562529 intestine and pancreas normal 4.82899 SRR633550 larvae exposed to hypoxia stress 4.4547 SRR1039571 gastrointestinal diet 0.1 NPM 4.4371 SRR1005530 embryo RPL11 morpholino 4.327719999999999 SRR038624 embryo traf6 morpholino and bacterial infection 4.234380000000001 SRR748491 germ ring normal 3.8711300000000004 SRR1562532 spleen normal 3.81431 SRR519737 2 dpf VD3 treatment 3.6208400000000003 SRR726541 5 dpf infection with Mycobacterium marinum 3.58629 SRR726542 5 dpf infection with control 3.54774 SRR1647684 spleen SVCV treatment 3.51759 SRR514028 retina control morpholino 3.3936300000000004 SRR1004785 larvae normal 3.35946 SRR800046 sphere stage 5azaCyD treatment 3.26605 SRR1004789 larvae impdh2 morpholino 3.24067 SRR592701 pineal gland normal 3.08357 SRR1004787 larvae impdh1a morpholino 3.06561 SRR065196 3 dpf normal 3.03658 SRR801556 embryo RPS19 and p53 morpholino 3.0147 SRR633544 larvae exposed to cold stress 2.83642 SRR038625 embryo traf6 morpholino 2.75225 SRR594771 endothelium normal 2.39646 SRR1647682 spleen normal 2.36938 ERR023144 brain normal 2.33425 SRR592702 pineal gland normal 2.26343 SRR1647683 spleen SVCV treatment 2.2477400000000003 SRR527835 tail normal 1.97532 SRR748488 sperm normal 1.79928 SRR748489 egg normal 1.7246599999999999 SRR891510 muscle normal 1.5444200000000001 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.41153 ERR594418 retina transgenic flk1 and develop tumors 1.30161 SRR1035239 liver transgenic mCherry control 1.14904 SRR1565817 brain normal 1.1326 SRR1565805 brain normal 0.988856 SRR1565811 brain normal 0.953775 SRR594769 blood normal 0.9445370000000001 SRR1039573 gastrointestinal diet 0.75 NPM 0.8672629999999999 SRR1035237 liver transgenic UHRF1 0.796892 SRR1565807 brain normal 0.783337 SRR1565809 brain normal 0.762496 SRR592700 pineal gland normal 0.7344609999999999 SRR592699 pineal gland normal 0.727535 SRR372791 dome normal 0.6758649999999999 SRR1565813 brain normal 0.672031 SRR891495 heart normal 0.654432 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.5765319999999999 ERR594416 retina transgenic flk1 0.541457 SRR1048061 pineal gland dark 0.499313 SRR1569495 embryo normal 0.47873999999999994 SRR514030 retina id2a morpholino 0.438921 SRR1565815 brain normal 0.429079 SRR1565819 brain normal 0.420967 SRR1048059 pineal gland light 0.417783 SRR592703 pineal gland normal 0.41168599999999994 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.37733099999999997 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.343926 SRR592698 pineal gland normal 0.322918 SRR1569491 embryo normal 0.308922 SRR957181 heart normal 0.294381 ERR594417 retina normal 0.23446199999999998 SRR1021215 sphere stage Mzeomesa 0.166037 SRR957180 heart 7 days after heart tip amputation 0.128772 SRR1021213 sphere stage normal 0.060395800000000006