sample tissue condition fpkm SRR372796 bud normal 49.2779 SRR658539 bud Gata5/6 morphant 48.6543 SRR658537 bud Gata6 morphant 46.0844 SRR658533 bud normal 45.7466 SRR1569491 embryo normal 42.5187 SRR658535 bud Gata5 morphant 39.1321 SRR658547 6 somite Gata5/6 morphant 36.9407 SRR514028 retina control morpholino 36.7232 SRR658545 6 somite Gata6 morphant 33.8446 SRR514030 retina id2a morpholino 31.9803 SRR1035978 13 hpf rx3-/- 31.1975 SRR594771 endothelium normal 29.0544 SRR658543 6 somite Gata5 morphan 28.4843 SRR1035981 13 hpf rx3+/+ or rx3+/- 27.4819 SRR658541 6 somite normal 27.0766 SRR038627 embryo control morpholino 26.2765 SRR1104059 heart kctd10 mut 25.4266 SRR1104058 heart normal 24.6745 SRR1021213 sphere stage normal 23.8028 SRR776507 embryo normal 23.2762 SRR372793 shield normal 23.2602 SRR065196 3 dpf normal 23.1934 SRR535986 larvae nhsl1b mut 22.6925 SRR797917 embryo pbx2/4-MO and prdm1-/- 22.2697 SRR535978 larvae normal 22.1311 SRR594769 blood normal 21.8703 SRR797908 embryo normal 21.7236 SRR1569495 embryo normal 20.7403 SRR372791 dome normal 20.2316 SRR065197 3 dpf U1C knockout 20.1953 SRR527832 16-36 hpf normal 20.192999999999998 SRR038624 embryo traf6 morpholino and bacterial infection 19.425 SRR038625 embryo traf6 morpholino 18.9118 SRR527835 tail normal 18.4985 SRR797914 embryo pbx2/4-MO 18.1788 SRR797911 embryo prdm1-/- 18.0206 SRR527840 24hpf normal 17.6678 SRR038626 embryo control morpholino and bacterial infection 16.6525 SRR1708343 embryo MUTAS 15.867 SRR1021215 sphere stage Mzeomesa 15.5903 SRR372798 28 hpf normal 15.2937 SRR1035984 13 hpf normal 14.9597 SRR527833 5 dpf normal 14.6864 SRR748491 germ ring normal 14.5853 SRR1004785 larvae normal 14.3929 SRR1004787 larvae impdh1a morpholino 14.3825 SRR372800 2 dpf normal 14.0791 SRR749514 24 hpf normal 13.9876 SRR1647682 spleen normal 13.8812 SRR1708345 embryo SIBAS 13.2107 SRR700537 heart Gata4 morpholino 13.1404 SRR1648854 brain normal 12.7444 SRR800037 egg normal 12.4378 SRR1205154 5dpf transgenic sqET20 12.0898 SRR700534 heart control morpholino 12.0708 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 12.0246 SRR1004786 larvae control morpholino 12.024000000000001 SRR1004789 larvae impdh2 morpholino 11.9496 SRR886457 512 cell 4-thio-UTP metabolic labeling 11.9455 SRR516123 skin male and 3.5 year 11.8235 SRR372789 1K cell normal 11.7505 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 11.5881 SRR776509 embryo Salmonella infected 11.5715 SRR1035237 liver transgenic UHRF1 11.2737 SRR726542 5 dpf infection with control 11.1378 SRR516132 skin male and 5 month 11.069 SRR1523211 embryo control morpholino 11.0439 SRR776508 embryo miR-146 knockdown 10.9507 SRR1004788 larvae impdh1b morpholino 10.263 SRR516121 skin male and 3.5 year 10.154 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 10.128 SRR749515 24 hpf eif3ha morphant 10.1123 SRR726541 5 dpf infection with Mycobacterium marinum 10.1118 SRR527844 24hpf normal 9.97241 SRR891512 blood normal 9.77638 SRR886455 128 cell 4-thio-UTP metabolic labeling 9.775319999999999 SRR519717 2 dpf FETOH treatment 9.6955 SRR1647683 spleen SVCV treatment 9.47004 SRR1647684 spleen SVCV treatment 9.45599 SRR535926 larvae normal 9.167530000000001 SRR527836 24hpf normal 9.021519999999999 SRR519737 2 dpf VD3 treatment 8.86612 SRR726540 5 dpf normal 8.11947 SRR610742 3 dpf express NICD 8.11449 SRR1648856 brain normal 8.09837 SRR886456 256 cell 4-thio-UTP metabolic labeling 8.09633 SRR1647680 head kidney SVCV treatment 8.00877 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 8.0013 SRR633544 larvae exposed to cold stress 7.978089999999999 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 7.847989999999999 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 7.8122 SRR776510 embryo Salmonella infected and miR-146 knockdown 7.6547600000000005 SRR1647681 head kidney SVCV treatment 7.57768 SRR1188148 embryo Control PBS 0.5 hpi 7.51352 SRR535943 larvae vangl mut 7.47739 SRR891495 heart normal 7.4085600000000005 SRR1205160 5dpf transgenic sqET20 and GFP+ 7.3377300000000005 SRR1291414 5 dpi normal 7.23203 SRR1523214 embryo glut12 morpholino 6.9795300000000005 SRR1708344 embryo MUTPS 6.76024 SRR1647679 head kidney normal 6.6532 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 6.52442 SRR1291417 5 dpi injected marinum 6.39975 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 6.379 SRR1188152 embryo Insulin 0.5 hpi 6.35457 SRR831692 embryo normal 6.34762 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 6.32078 SRR633516 larvae normal 6.2373 SRR1708346 embryo SIBPS 6.07679 SRR610741 3 dpf express Ras 6.00545 SRR516126 skin male and 5 month 5.93959 SRR801556 embryo RPS19 and p53 morpholino 5.85059 SRR630463 5 dpf normal 5.54903 SRR633550 larvae exposed to hypoxia stress 5.4153199999999995 SRR516129 skin male and 5 month 5.38853 SRR748489 egg normal 5.34132 SRR516128 skin male and 5 month 5.29223 SRR1188156 embryo Control PBS 4 hpi 5.2647 SRR941749 anterior pectoral fin normal 5.2285699999999995 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 5.22055 SRR535851 larvae normal 5.14349 SRR1035239 liver transgenic mCherry control 5.02951 SRR1167756 embryo mpeg1 morpholino 4.9964 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 4.96579 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 4.95331 SRR941753 posterior pectoral fin normal 4.88629 ERR023146 head kidney normal 4.88506 SRR516127 skin male and 5 month 4.88117 SRR516122 skin male and 3.5 year 4.787030000000001 SRR957180 heart 7 days after heart tip amputation 4.76555 SRR1188160 embryo Insulin 4 hpi 4.67887 SRR891510 muscle normal 4.5755300000000005 SRR516124 skin male and 3.5 year 4.52475 SRR516130 skin male and 5 month 4.44233 SRR535913 larvae krox mut 4.24388 SRR519742 4 dpf VD3 treatment 4.24136 SRR1562531 muscle normal 4.19128 SRR610740 3 dpf normal 4.16317 SRR1648855 brain normal 4.16183 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 4.14342 SRR372787 2-4 cell normal 4.10395 SRR516134 skin male and 5 month 4.041580000000001 SRR516131 skin male and 5 month 3.97597 SRR1049814 256 cell normal 3.87713 SRR1299128 caudal fin Three days time after treatment 3.8725699999999996 SRR535890 larvae normal 3.8581199999999995 SRR535847 larvae normal 3.84217 SRR891504 liver normal 3.7855300000000005 SRR535849 larvae normal 3.62065 ERR594418 retina transgenic flk1 and develop tumors 3.61006 SRR1048061 pineal gland dark 3.6067699999999996 SRR519752 7 dpf VD3 treatment 3.6002300000000003 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.59155 SRR801555 embryo RPS19 morpholino 3.5666900000000004 SRR1342216 embryo norml 3.53494 ERR594416 retina transgenic flk1 3.3284800000000003 SRR957181 heart normal 3.2459 SRR1005529 embryo control morpholino 3.24552 SRR801554 embryo control morpholino 3.24063 SRR527834 head normal 3.2358 SRR1028004 head normal 3.23372 SRR1167762 embryo ptpn6 morpholino 3.21884 SRR748490 1 kcell normal 3.14722 SRR519732 7 dpf FETOH treatment 3.0659099999999997 SRR516133 skin male and 5 month 3.06565 SRR1299124 caudal fin Zero day time after treatment 3.02051 SRR1048059 pineal gland light 2.9592099999999997 SRR1621206 embryo normal 2.95109 SRR516135 skin male and 5 month 2.8689299999999998 SRR592699 pineal gland normal 2.80971 SRR1167752 embryo normal 2.78783 SRR1342218 embryo marco morpholino 2.66974 SRR519727 6 dpf FETOH treatment 2.62567 SRR1167753 embryo bacterial infection 2.62196 SRR535850 larvae hoxb1b mut 2.52012 SRR519747 6 dpf VD3 treatment 2.51035 SRR1562530 liver normal 2.4773099999999997 SRR891511 brain normal 2.4445200000000002 ERR023143 swim bladder normal 2.39165 SRR630464 5 dpf injected epidermidis 2.29128 SRR516125 skin male and 3.5 year 2.2736400000000003 SRR1565809 brain normal 2.15675 SRR519722 4 dpf FETOH treatment 2.02336 SRR1028002 head normal 2.00228 SRR1565813 brain normal 1.9414900000000002 SRR1565807 brain normal 1.85549 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.83005 SRR592700 pineal gland normal 1.78435 SRR1565805 brain normal 1.7687400000000002 SRR1562532 spleen normal 1.74299 SRR1565815 brain normal 1.72195 SRR942764 embryo myd88-/- 1.60705 SRR1534350 larvae 5 ug/l BDE47 treatment 1.53691 SRR1534351 larvae 500 ug/l BDE47 treatment 1.48051 SRR372802 5 dpf normal 1.46128 ERR023144 brain normal 1.44846 SRR1565811 brain normal 1.39838 SRR592698 pineal gland normal 1.39598 SRR1562528 eye normal 1.34156 SRR1565819 brain normal 1.33437 SRR1299129 caudal fin Seven days time after treatment 1.27548 ERR594417 retina normal 1.2436399999999999 SRR535852 larvae hoxb1b mut 1.13628 SRR1562533 testis normal 1.10259 SRR535848 larvae hoxb1b mut 1.0459200000000002 SRR1565817 brain normal 1.01294 SRR1342217 embryo infection with Mycobacterium marinum 1.00196 ERR023145 heart normal 0.975406 SRR748488 sperm normal 0.916881 SRR1028003 head normal 0.8245049999999999 SRR592703 pineal gland normal 0.811589 SRR592701 pineal gland normal 0.473106 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.46668699999999996 SRR1299127 caudal fin Two days time after treatment 0.42983599999999994 SRR942769 embryo myd88+/+ 0.414409 SRR1039571 gastrointestinal diet 0.1 NPM 0.24493800000000002 SRR1299126 caudal fin One day time after treatment 0.18526099999999998 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.172771 SRR1039573 gastrointestinal diet 0.75 NPM 0.166972 SRR800045 muscle normal 0.0140572 SRR1534349 larvae DMSO vehicle 0.00210489