sample tissue condition fpkm SRR514028 retina control morpholino 18.8276 SRR514030 retina id2a morpholino 12.5527 SRR535978 larvae normal 12.1966 SRR1342218 embryo marco morpholino 11.5717 SRR942769 embryo myd88+/+ 11.2609 SRR1523211 embryo control morpholino 11.1933 SRR630464 5 dpf injected epidermidis 11.0241 SRR630463 5 dpf normal 10.6829 SRR1562528 eye normal 10.3066 SRR1291417 5 dpi injected marinum 10.1861 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 10.0582 SRR1167753 embryo bacterial infection 10.0526 SRR1342216 embryo norml 9.85239 SRR1291414 5 dpi normal 9.81172 SRR1569491 embryo normal 9.70032 SRR1565807 brain normal 9.55615 SRR1565805 brain normal 9.43096 SRR1167763 embryo ptpn6 morpholino and bacterial infection 9.23698 SRR1167752 embryo normal 9.11285 SRR535986 larvae nhsl1b mut 9.105830000000001 SRR942764 embryo myd88-/- 8.913889999999999 SRR592699 pineal gland normal 8.86357 SRR1167757 embryo mpeg1 morpholino and bacterial infection 8.859919999999999 SRR1167756 embryo mpeg1 morpholino 8.85516 SRR1565811 brain normal 8.57253 SRR1342217 embryo infection with Mycobacterium marinum 8.416 SRR1523214 embryo glut12 morpholino 8.19413 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 7.78755 SRR1565809 brain normal 7.7853699999999995 SRR776507 embryo normal 7.68558 SRR592703 pineal gland normal 7.60819 SRR776508 embryo miR-146 knockdown 7.455769999999999 SRR1205154 5dpf transgenic sqET20 7.34082 SRR592702 pineal gland normal 7.32362 SRR1565819 brain normal 7.31071 ERR023144 brain normal 7.29782 SRR1188152 embryo Insulin 0.5 hpi 7.18525 SRR592698 pineal gland normal 7.00462 SRR1188148 embryo Control PBS 0.5 hpi 6.86056 SRR1167762 embryo ptpn6 morpholino 6.7408 SRR1565813 brain normal 6.68997 SRR1565817 brain normal 6.566739999999999 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 6.5664 SRR1708345 embryo SIBAS 6.560910000000001 SRR527840 24hpf normal 6.43425 SRR776510 embryo Salmonella infected and miR-146 knockdown 6.42442 SRR065196 3 dpf normal 6.41547 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 6.32247 SRR1035237 liver transgenic UHRF1 6.2302599999999995 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 6.22156 SRR1028004 head normal 6.18534 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 6.12082 SRR527836 24hpf normal 6.02525 SRR1188156 embryo Control PBS 4 hpi 5.7046 SRR1565815 brain normal 5.5656300000000005 SRR594771 endothelium normal 5.55457 SRR776509 embryo Salmonella infected 5.3437 SRR592701 pineal gland normal 5.29629 ERR594416 retina transgenic flk1 5.24591 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.09765 SRR1028002 head normal 5.04092 ERR594417 retina normal 5.04082 SRR1188160 embryo Insulin 4 hpi 5.0295 SRR1708346 embryo SIBPS 5.02136 SRR1569495 embryo normal 4.964580000000001 SRR726540 5 dpf normal 4.9572400000000005 SRR535890 larvae normal 4.77504 SRR831692 embryo normal 4.74688 SRR592700 pineal gland normal 4.6833599999999995 SRR535913 larvae krox mut 4.620340000000001 SRR535848 larvae hoxb1b mut 4.6038 SRR1534350 larvae 5 ug/l BDE47 treatment 4.4730099999999995 SRR1534349 larvae DMSO vehicle 4.4403 SRR1028003 head normal 4.38593 SRR519722 4 dpf FETOH treatment 4.2744599999999995 SRR535847 larvae normal 4.24378 SRR519742 4 dpf VD3 treatment 4.243130000000001 SRR726542 5 dpf infection with control 4.15266 SRR038627 embryo control morpholino 4.12009 SRR535943 larvae vangl mut 4.11846 SRR1708343 embryo MUTAS 4.11698 SRR535851 larvae normal 4.06067 SRR1048061 pineal gland dark 3.9822 SRR535926 larvae normal 3.92829 SRR535852 larvae hoxb1b mut 3.92685 SRR065197 3 dpf U1C knockout 3.9221199999999996 SRR726541 5 dpf infection with Mycobacterium marinum 3.86945 SRR535849 larvae normal 3.7368699999999997 ERR594418 retina transgenic flk1 and develop tumors 3.6119199999999996 SRR519727 6 dpf FETOH treatment 3.6090400000000002 SRR519732 7 dpf FETOH treatment 3.60829 SRR527833 5 dpf normal 3.58891 SRR1104059 heart kctd10 mut 3.52713 SRR1562533 testis normal 3.4755 SRR1004786 larvae control morpholino 3.44538 SRR519747 6 dpf VD3 treatment 3.4339699999999995 SRR1048059 pineal gland light 3.35491 SRR633550 larvae exposed to hypoxia stress 3.29607 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.2818300000000002 SRR633516 larvae normal 3.21365 SRR1104058 heart normal 3.1419099999999998 SRR1708344 embryo MUTPS 3.10126 SRR535850 larvae hoxb1b mut 3.04014 SRR519752 7 dpf VD3 treatment 2.99634 SRR1035239 liver transgenic mCherry control 2.97802 SRR519737 2 dpf VD3 treatment 2.93427 SRR519717 2 dpf FETOH treatment 2.91635 SRR1035978 13 hpf rx3-/- 2.89935 SRR1562532 spleen normal 2.86246 SRR797908 embryo normal 2.86136 SRR610740 3 dpf normal 2.83606 SRR797911 embryo prdm1-/- 2.81123 SRR594769 blood normal 2.76762 ERR023146 head kidney normal 2.75094 SRR1534351 larvae 500 ug/l BDE47 treatment 2.7167 SRR1004785 larvae normal 2.70595 SRR658547 6 somite Gata5/6 morphant 2.63729 SRR886455 128 cell 4-thio-UTP metabolic labeling 2.57538 SRR797914 embryo pbx2/4-MO 2.56053 SRR038624 embryo traf6 morpholino and bacterial infection 2.55468 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.55413 SRR891511 brain normal 2.5297400000000003 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.52862 SRR038625 embryo traf6 morpholino 2.47665 SRR527832 16-36 hpf normal 2.4252700000000003 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.38016 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.3575 SRR1035984 13 hpf normal 2.24781 SRR610742 3 dpf express NICD 2.2263 SRR038626 embryo control morpholino and bacterial infection 2.2019 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.16675 SRR516127 skin male and 5 month 2.15375 SRR527834 head normal 2.0998200000000002 SRR527844 24hpf normal 2.06668 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.0480099999999997 SRR748489 egg normal 2.03056 SRR1005529 embryo control morpholino 2.00483 SRR801554 embryo control morpholino 2.00181 SRR1004788 larvae impdh1b morpholino 1.9916099999999999 SRR1299126 caudal fin One day time after treatment 1.9832599999999998 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.9804400000000002 SRR1004787 larvae impdh1a morpholino 1.96068 SRR516130 skin male and 5 month 1.9053400000000003 SRR1299128 caudal fin Three days time after treatment 1.8973900000000001 SRR633544 larvae exposed to cold stress 1.8940299999999999 SRR610741 3 dpf express Ras 1.88848 SRR516134 skin male and 5 month 1.77988 SRR749514 24 hpf normal 1.76825 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.6278700000000002 SRR516126 skin male and 5 month 1.4884 SRR516129 skin male and 5 month 1.46807 SRR516128 skin male and 5 month 1.45949 SRR1299127 caudal fin Two days time after treatment 1.43354 SRR1004789 larvae impdh2 morpholino 1.4071 SRR749515 24 hpf eif3ha morphant 1.38065 SRR1005530 embryo RPL11 morpholino 1.3654600000000001 ERR023143 swim bladder normal 1.3360100000000001 SRR1299125 caudal fin Half day time after treatment 1.20775 SRR1299129 caudal fin Seven days time after treatment 1.16008 SRR516133 skin male and 5 month 1.09791 SRR516132 skin male and 5 month 1.03243 SRR801556 embryo RPS19 and p53 morpholino 1.00837 SRR1562529 intestine and pancreas normal 0.991023 SRR516123 skin male and 3.5 year 0.9883719999999999 SRR516131 skin male and 5 month 0.879683 SRR516124 skin male and 3.5 year 0.839607 SRR1039573 gastrointestinal diet 0.75 NPM 0.809293 SRR801555 embryo RPS19 morpholino 0.781311 SRR516125 skin male and 3.5 year 0.7672329999999999 SRR516135 skin male and 5 month 0.765308 SRR700537 heart Gata4 morpholino 0.739574 SRR1562530 liver normal 0.713659 SRR1021213 sphere stage normal 0.689469 SRR748488 sperm normal 0.681901 SRR1039571 gastrointestinal diet 0.1 NPM 0.681031 SRR516121 skin male and 3.5 year 0.668321 SRR658535 bud Gata5 morphant 0.621965 SRR1021215 sphere stage Mzeomesa 0.6029100000000001 SRR941749 anterior pectoral fin normal 0.558636 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.500772 ERR023145 heart normal 0.4919 SRR658533 bud normal 0.47723999999999994 SRR1647681 head kidney SVCV treatment 0.463383 SRR748491 germ ring normal 0.45435299999999995 SRR1562531 muscle normal 0.43307399999999996 SRR1647680 head kidney SVCV treatment 0.429805 SRR658539 bud Gata5/6 morphant 0.42141999999999996 SRR1647684 spleen SVCV treatment 0.366238 SRR700534 heart control morpholino 0.361858 SRR658541 6 somite normal 0.35735500000000003 SRR1647679 head kidney normal 0.357217 SRR516122 skin male and 3.5 year 0.356657 SRR1299124 caudal fin Zero day time after treatment 0.34482399999999996 SRR658545 6 somite Gata6 morphant 0.316232 SRR891510 muscle normal 0.29170999999999997 SRR800037 egg normal 0.285027 SRR1647683 spleen SVCV treatment 0.28289000000000003 SRR941753 posterior pectoral fin normal 0.279552 SRR1647682 spleen normal 0.27689899999999995 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.252367 SRR527835 tail normal 0.242389 SRR800049 sphere stage control treatment 0.241223 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.196575 SRR658543 6 somite Gata5 morphan 0.19545099999999999 SRR891495 heart normal 0.182396 SRR891504 liver normal 0.179296 SRR658537 bud Gata6 morphant 0.169746 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.11708699999999998 SRR800043 sphere stage normal 0.09173189999999999 SRR800046 sphere stage 5azaCyD treatment 0.0763376 SRR891512 blood normal 0.053136 SRR748490 1 kcell normal 0.0398272 SRR1648854 brain normal 0.013325299999999998 SRR1648856 brain normal 0.0121014 SRR372789 1K cell normal 0.00334037