sample tissue condition fpkm SRR535978 larvae normal 24.4214 ERR023144 brain normal 19.7559 SRR535986 larvae nhsl1b mut 12.9427 SRR1299129 caudal fin Seven days time after treatment 12.3404 SRR527844 24hpf normal 11.0597 SRR749514 24 hpf normal 10.9016 SRR1299127 caudal fin Two days time after treatment 10.8641 SRR1035978 13 hpf rx3-/- 10.4442 SRR1565811 brain normal 10.2002 SRR1648856 brain normal 10.0819 SRR749515 24 hpf eif3ha morphant 10.0591 SRR891511 brain normal 9.955589999999999 SRR065197 3 dpf U1C knockout 9.43413 SRR527834 head normal 9.25985 SRR1004786 larvae control morpholino 8.91795 SRR527836 24hpf normal 8.808819999999999 SRR527840 24hpf normal 8.60331 SRR535890 larvae normal 8.400139999999999 SRR1004785 larvae normal 8.390239999999999 SRR797908 embryo normal 8.32572 SRR592702 pineal gland normal 8.22754 SRR797911 embryo prdm1-/- 7.9981100000000005 SRR1569491 embryo normal 7.99765 SRR1035981 13 hpf rx3+/+ or rx3+/- 7.92495 SRR1565819 brain normal 7.9226 SRR592699 pineal gland normal 7.79 SRR372802 5 dpf normal 7.774039999999999 SRR1005529 embryo control morpholino 7.71762 SRR801554 embryo control morpholino 7.706010000000001 SRR372800 2 dpf normal 7.666869999999999 SRR594771 endothelium normal 7.60779 SRR514030 retina id2a morpholino 7.5395 SRR065196 3 dpf normal 7.43 SRR1708344 embryo MUTPS 7.33242 SRR1565805 brain normal 7.324910000000001 SRR1167756 embryo mpeg1 morpholino 7.305789999999999 SRR372798 28 hpf normal 7.240239999999999 SRR1291417 5 dpi injected marinum 7.10383 SRR514028 retina control morpholino 7.079560000000001 SRR1565809 brain normal 6.90326 SRR038624 embryo traf6 morpholino and bacterial infection 6.87401 SRR1299125 caudal fin Half day time after treatment 6.7859 SRR535926 larvae normal 6.7782100000000005 SRR797917 embryo pbx2/4-MO and prdm1-/- 6.73813 SRR527832 16-36 hpf normal 6.70436 SRR1004787 larvae impdh1a morpholino 6.63552 SRR1004788 larvae impdh1b morpholino 6.58701 SRR592701 pineal gland normal 6.54766 SRR1342217 embryo infection with Mycobacterium marinum 6.53886 SRR700534 heart control morpholino 6.46479 SRR891495 heart normal 6.462280000000001 SRR1565813 brain normal 6.4336199999999995 SRR1708346 embryo SIBPS 6.1559099999999995 SRR516130 skin male and 5 month 6.0496 SRR1188148 embryo Control PBS 0.5 hpi 6.013809999999999 SRR658547 6 somite Gata5/6 morphant 6.01321 SRR527833 5 dpf normal 6.01006 SRR1523211 embryo control morpholino 5.99251 SRR516127 skin male and 5 month 5.96365 SRR516129 skin male and 5 month 5.9110000000000005 SRR1299128 caudal fin Three days time after treatment 5.87591 SRR658543 6 somite Gata5 morphan 5.85452 SRR776507 embryo normal 5.71225 SRR1167762 embryo ptpn6 morpholino 5.62812 SRR1565815 brain normal 5.578469999999999 SRR594769 blood normal 5.57578 ERR023146 head kidney normal 5.56691 SRR1035984 13 hpf normal 5.46894 SRR1565807 brain normal 5.42086 SRR700537 heart Gata4 morpholino 5.34225 SRR831692 embryo normal 5.290690000000001 SRR1342218 embryo marco morpholino 5.21966 SRR535913 larvae krox mut 5.19878 SRR1005530 embryo RPL11 morpholino 5.19123 SRR1565817 brain normal 5.17759 SRR1035237 liver transgenic UHRF1 5.0852900000000005 SRR797914 embryo pbx2/4-MO 5.00479 SRR535943 larvae vangl mut 4.99255 SRR942769 embryo myd88+/+ 4.9299599999999995 SRR038627 embryo control morpholino 4.84504 SRR038625 embryo traf6 morpholino 4.76579 SRR519737 2 dpf VD3 treatment 4.64644 SRR1188156 embryo Control PBS 4 hpi 4.637580000000001 SRR658541 6 somite normal 4.620419999999999 SRR1299126 caudal fin One day time after treatment 4.599880000000001 SRR1569495 embryo normal 4.55333 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 4.49616 SRR519717 2 dpf FETOH treatment 4.47029 SRR516126 skin male and 5 month 4.45829 SRR1291414 5 dpi normal 4.37059 SRR516134 skin male and 5 month 4.36054 SRR1562532 spleen normal 4.1950400000000005 SRR1534349 larvae DMSO vehicle 4.19418 SRR1167753 embryo bacterial infection 4.17481 SRR610740 3 dpf normal 4.16641 SRR1342216 embryo norml 4.05075 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.9741699999999995 SRR516131 skin male and 5 month 3.87926 SRR1188152 embryo Insulin 0.5 hpi 3.7379 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.72799 SRR1648855 brain normal 3.6524099999999997 SRR1708345 embryo SIBAS 3.6343099999999997 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.63341 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 3.60106 ERR594418 retina transgenic flk1 and develop tumors 3.59542 SRR630463 5 dpf normal 3.5568400000000002 SRR658533 bud normal 3.52274 SRR516133 skin male and 5 month 3.48596 SRR886456 256 cell 4-thio-UTP metabolic labeling 3.3889099999999996 SRR038626 embryo control morpholino and bacterial infection 3.3611699999999995 SRR1648854 brain normal 3.16466 ERR594417 retina normal 3.14971 SRR633544 larvae exposed to cold stress 3.11476 SRR1104058 heart normal 3.09488 SRR658535 bud Gata5 morphant 3.09006 SRR1205160 5dpf transgenic sqET20 and GFP+ 3.08271 SRR516135 skin male and 5 month 2.89276 SRR1523214 embryo glut12 morpholino 2.84975 SRR1188160 embryo Insulin 4 hpi 2.8012099999999998 SRR1647684 spleen SVCV treatment 2.7686599999999997 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.7502299999999997 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.7429099999999997 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.65578 SRR801556 embryo RPS19 and p53 morpholino 2.63667 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 2.6299900000000003 SRR942764 embryo myd88-/- 2.61344 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.5895599999999996 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.55895 SRR519722 4 dpf FETOH treatment 2.4830200000000002 SRR1647681 head kidney SVCV treatment 2.45213 SRR658545 6 somite Gata6 morphant 2.41882 SRR535851 larvae normal 2.4055 SRR891512 blood normal 2.4019 SRR519742 4 dpf VD3 treatment 2.37996 SRR519727 6 dpf FETOH treatment 2.3690900000000004 SRR630464 5 dpf injected epidermidis 2.36198 SRR726540 5 dpf normal 2.33529 SRR658539 bud Gata5/6 morphant 2.27834 SRR1205154 5dpf transgenic sqET20 2.26602 SRR1562533 testis normal 2.25438 SRR1647683 spleen SVCV treatment 2.2455 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.1222 SRR1028003 head normal 2.09326 SRR519732 7 dpf FETOH treatment 2.0876 SRR633516 larvae normal 1.96977 SRR535847 larvae normal 1.9539099999999998 SRR1562530 liver normal 1.92114 SRR516122 skin male and 3.5 year 1.88736 SRR535848 larvae hoxb1b mut 1.80893 SRR519747 6 dpf VD3 treatment 1.76472 SRR1647680 head kidney SVCV treatment 1.74957 ERR594416 retina transgenic flk1 1.745 SRR1534351 larvae 500 ug/l BDE47 treatment 1.7135200000000002 SRR372796 bud normal 1.7078799999999998 SRR1534350 larvae 5 ug/l BDE47 treatment 1.7021700000000002 SRR801555 embryo RPS19 morpholino 1.65831 SRR372787 2-4 cell normal 1.6531 SRR1167752 embryo normal 1.63952 SRR1004789 larvae impdh2 morpholino 1.6187200000000002 SRR519752 7 dpf VD3 treatment 1.60766 SRR957180 heart 7 days after heart tip amputation 1.5618100000000001 SRR535852 larvae hoxb1b mut 1.50527 SRR1647679 head kidney normal 1.4541 SRR1021213 sphere stage normal 1.44949 SRR1104059 heart kctd10 mut 1.44549 SRR1562528 eye normal 1.4297799999999998 SRR726542 5 dpf infection with control 1.41621 SRR1299124 caudal fin Zero day time after treatment 1.3492600000000001 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.34901 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.33825 SRR748488 sperm normal 1.26947 SRR1035239 liver transgenic mCherry control 1.23135 SRR633550 larvae exposed to hypoxia stress 1.19921 SRR1039571 gastrointestinal diet 0.1 NPM 1.1556600000000001 SRR372793 shield normal 1.15185 SRR941749 anterior pectoral fin normal 1.13134 SRR1039573 gastrointestinal diet 0.75 NPM 1.0058799999999999 SRR592698 pineal gland normal 0.978563 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.9341459999999999 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.843622 SRR748491 germ ring normal 0.773367 SRR535850 larvae hoxb1b mut 0.7730060000000001 SRR516125 skin male and 3.5 year 0.751861 SRR1647682 spleen normal 0.732649 SRR516124 skin male and 3.5 year 0.716619 SRR1562531 muscle normal 0.705887 SRR1562529 intestine and pancreas normal 0.7044729999999999 SRR535849 larvae normal 0.696129 SRR516121 skin male and 3.5 year 0.680121 SRR516123 skin male and 3.5 year 0.670547 SRR1049814 256 cell normal 0.570666 SRR658537 bud Gata6 morphant 0.5363939999999999 SRR1021215 sphere stage Mzeomesa 0.523875 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.46243999999999996 SRR372791 dome normal 0.416283 SRR372789 1K cell normal 0.335142 SRR610741 3 dpf express Ras 0.317382