sample tissue condition fpkm SRR1299124 caudal fin Zero day time after treatment 40.7413 SRR941749 anterior pectoral fin normal 23.4954 SRR1299129 caudal fin Seven days time after treatment 16.2948 SRR941753 posterior pectoral fin normal 13.2055 SRR1299127 caudal fin Two days time after treatment 11.6664 SRR1299126 caudal fin One day time after treatment 11.104000000000001 SRR1299125 caudal fin Half day time after treatment 9.22758 SRR633516 larvae normal 8.85745 SRR633550 larvae exposed to hypoxia stress 8.67923 SRR527834 head normal 8.34326 SRR516125 skin male and 3.5 year 7.38667 SRR1299128 caudal fin Three days time after treatment 7.365639999999999 SRR516129 skin male and 5 month 4.71138 SRR516131 skin male and 5 month 4.07782 SRR516135 skin male and 5 month 3.7815300000000005 SRR516123 skin male and 3.5 year 3.687 SRR516124 skin male and 3.5 year 3.4188099999999997 SRR1039571 gastrointestinal diet 0.1 NPM 3.3868400000000003 SRR516121 skin male and 3.5 year 3.1621900000000003 SRR516122 skin male and 3.5 year 3.0013799999999997 SRR1039573 gastrointestinal diet 0.75 NPM 2.97127 SRR592701 pineal gland normal 2.79862 SRR633544 larvae exposed to cold stress 2.70838 SRR516132 skin male and 5 month 2.6920599999999997 SRR516133 skin male and 5 month 2.53688 SRR592703 pineal gland normal 2.2949599999999997 SRR592699 pineal gland normal 2.12339 SRR527835 tail normal 2.0743400000000003 SRR519732 7 dpf FETOH treatment 2.0060700000000002 SRR516126 skin male and 5 month 1.9827400000000002 SRR519752 7 dpf VD3 treatment 1.9333200000000001 SRR891512 blood normal 1.9248 SRR516134 skin male and 5 month 1.86875 SRR519727 6 dpf FETOH treatment 1.85643 SRR519747 6 dpf VD3 treatment 1.8415700000000002 SRR516130 skin male and 5 month 1.7121 SRR592698 pineal gland normal 1.7028599999999998 SRR516128 skin male and 5 month 1.68137 SRR592700 pineal gland normal 1.5349700000000002 SRR658547 6 somite Gata5/6 morphant 1.52695 SRR726542 5 dpf infection with control 1.46209 SRR519742 4 dpf VD3 treatment 1.33307 SRR516127 skin male and 5 month 1.25914 SRR658541 6 somite normal 1.24986 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 1.1939600000000001 SRR658545 6 somite Gata6 morphant 1.17591 SRR527833 5 dpf normal 1.16634 SRR519722 4 dpf FETOH treatment 1.13575 SRR658537 bud Gata6 morphant 1.1319700000000001 SRR630463 5 dpf normal 1.1089799999999999 SRR726541 5 dpf infection with Mycobacterium marinum 1.1070799999999998 SRR726540 5 dpf normal 1.06994 SRR1291417 5 dpi injected marinum 1.0344200000000001 SRR1167753 embryo bacterial infection 1.0306899999999999 SRR1291414 5 dpi normal 0.985289 SRR658533 bud normal 0.9845219999999999 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.984447 SRR658543 6 somite Gata5 morphan 0.9833729999999999 SRR1562529 intestine and pancreas normal 0.93642 SRR1562528 eye normal 0.932689 SRR372802 5 dpf normal 0.918377 SRR592702 pineal gland normal 0.915392 SRR594771 endothelium normal 0.8808090000000001 SRR535852 larvae hoxb1b mut 0.862807 SRR519737 2 dpf VD3 treatment 0.8572139999999999 SRR658535 bud Gata5 morphant 0.834266 SRR776508 embryo miR-146 knockdown 0.823257 SRR1188148 embryo Control PBS 0.5 hpi 0.804883 SRR942769 embryo myd88+/+ 0.7932939999999999 SRR749515 24 hpf eif3ha morphant 0.791983 SRR1342217 embryo infection with Mycobacterium marinum 0.776636 SRR1048059 pineal gland light 0.767121 SRR891504 liver normal 0.7648510000000001 SRR610740 3 dpf normal 0.7565029999999999 SRR519717 2 dpf FETOH treatment 0.7451810000000001 SRR038627 embryo control morpholino 0.734571 SRR658539 bud Gata5/6 morphant 0.72646 SRR630464 5 dpf injected epidermidis 0.721485 SRR1167752 embryo normal 0.71306 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.709016 SRR1342218 embryo marco morpholino 0.6804600000000001 SRR1188160 embryo Insulin 4 hpi 0.675289 SRR749514 24 hpf normal 0.6611319999999999 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.65942 SRR527832 16-36 hpf normal 0.658284 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.647386 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.642687 SRR1167756 embryo mpeg1 morpholino 0.635838 SRR038625 embryo traf6 morpholino 0.626215 SRR891510 muscle normal 0.622797 SRR1648856 brain normal 0.609499 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.59117 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.588525 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.5792579999999999 SRR1028002 head normal 0.575298 ERR023144 brain normal 0.571978 SRR1534350 larvae 5 ug/l BDE47 treatment 0.5696760000000001 SRR1205154 5dpf transgenic sqET20 0.5469609999999999 SRR776509 embryo Salmonella infected 0.524584 SRR942764 embryo myd88-/- 0.511652 SRR372796 bud normal 0.504832 SRR535851 larvae normal 0.500694 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.491645 SRR1523214 embryo glut12 morpholino 0.483155 SRR776507 embryo normal 0.475287 SRR1028003 head normal 0.468925 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.448292 SRR372793 shield normal 0.442614 SRR610742 3 dpf express NICD 0.431699 SRR038624 embryo traf6 morpholino and bacterial infection 0.416875 SRR797914 embryo pbx2/4-MO 0.41656899999999997 SRR610741 3 dpf express Ras 0.407708 SRR797911 embryo prdm1-/- 0.401588 SRR535849 larvae normal 0.399327 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.396156 SRR1028004 head normal 0.393842 SRR1523211 embryo control morpholino 0.393349 SRR1534351 larvae 500 ug/l BDE47 treatment 0.383162 SRR1188156 embryo Control PBS 4 hpi 0.380279 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.36607199999999995 SRR038626 embryo control morpholino and bacterial infection 0.362381 SRR891511 brain normal 0.35765 SRR1648854 brain normal 0.35717600000000005 SRR748489 egg normal 0.33455999999999997 SRR1534349 larvae DMSO vehicle 0.328061 SRR1188152 embryo Insulin 0.5 hpi 0.324013 SRR535848 larvae hoxb1b mut 0.321519 SRR797908 embryo normal 0.31037600000000004 SRR372800 2 dpf normal 0.308888 SRR527840 24hpf normal 0.305341 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.296458 SRR535847 larvae normal 0.293689 SRR535850 larvae hoxb1b mut 0.28783600000000004 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.286723 SRR594769 blood normal 0.285544 SRR535913 larvae krox mut 0.274293 SRR1104058 heart normal 0.27110700000000004 SRR1342216 embryo norml 0.270012 SRR1048061 pineal gland dark 0.269279 SRR527836 24hpf normal 0.263278 SRR372791 dome normal 0.259062 SRR065196 3 dpf normal 0.254181 SRR372798 28 hpf normal 0.248177 SRR1035978 13 hpf rx3-/- 0.240245 SRR535943 larvae vangl mut 0.240042 SRR1004789 larvae impdh2 morpholino 0.239965 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.23381999999999997 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.23082199999999997 SRR1708343 embryo MUTAS 0.226425 SRR1004786 larvae control morpholino 0.22033899999999998 SRR1562533 testis normal 0.216602 SRR1167762 embryo ptpn6 morpholino 0.216142 SRR065197 3 dpf U1C knockout 0.205381 SRR1104059 heart kctd10 mut 0.19724 SRR1004787 larvae impdh1a morpholino 0.195109 SRR891495 heart normal 0.194381 SRR1035984 13 hpf normal 0.193472 ERR023146 head kidney normal 0.185387 SRR1004788 larvae impdh1b morpholino 0.184371 SRR535926 larvae normal 0.1799 ERR594417 retina normal 0.177857 SRR1647680 head kidney SVCV treatment 0.17683800000000002 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.17175 SRR1562531 muscle normal 0.16819 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.163464 SRR1708344 embryo MUTPS 0.146645 SRR535978 larvae normal 0.141052 ERR023143 swim bladder normal 0.140413 ERR023145 heart normal 0.137546 ERR594416 retina transgenic flk1 0.137449 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.137014 SRR700537 heart Gata4 morpholino 0.130598 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.12928399999999998 SRR1035237 liver transgenic UHRF1 0.125027 SRR535890 larvae normal 0.122456 SRR514028 retina control morpholino 0.118902 ERR594418 retina transgenic flk1 and develop tumors 0.117721 SRR1005530 embryo RPL11 morpholino 0.117099 SRR1562530 liver normal 0.10890699999999999 SRR1708345 embryo SIBAS 0.101096 SRR1562532 spleen normal 0.0997192 SRR527844 24hpf normal 0.09836260000000001 SRR748491 germ ring normal 0.09115 SRR1647683 spleen SVCV treatment 0.090786 SRR700534 heart control morpholino 0.0859099 SRR1647684 spleen SVCV treatment 0.083953 SRR1569491 embryo normal 0.081588 SRR535986 larvae nhsl1b mut 0.0805038 SRR1708346 embryo SIBPS 0.0773823 SRR1004785 larvae normal 0.0678438 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.06644349999999999 SRR514030 retina id2a morpholino 0.0622769 SRR1021215 sphere stage Mzeomesa 0.05862280000000001 SRR1035239 liver transgenic mCherry control 0.0517576 SRR1569495 embryo normal 0.0462452 SRR801556 embryo RPS19 and p53 morpholino 0.044984500000000004 SRR1565809 brain normal 0.0441552 SRR957180 heart 7 days after heart tip amputation 0.0436446 SRR1565819 brain normal 0.0413737 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.040836000000000004 SRR1565811 brain normal 0.0383962 SRR801555 embryo RPS19 morpholino 0.038077099999999996 SRR1565815 brain normal 0.0366176 SRR800043 sphere stage normal 0.035267 SRR1647681 head kidney SVCV treatment 0.0330467 SRR831692 embryo normal 0.0317003 SRR1647682 spleen normal 0.0296211 SRR1021213 sphere stage normal 0.029301499999999998 SRR1648855 brain normal 0.022477900000000002 SRR372789 1K cell normal 0.0222231 SRR1565817 brain normal 0.0195586 SRR748488 sperm normal 0.0187333 SRR1621206 embryo normal 0.018659400000000003 SRR1565813 brain normal 0.0183389 SRR1049814 256 cell normal 0.0160958 SRR372787 2-4 cell normal 0.0135639 SRR1565807 brain normal 0.00760778 SRR1565805 brain normal 0.00626236