sample tissue condition fpkm SRR800045 muscle normal 39.1983 SRR658535 bud Gata5 morphant 21.5525 SRR797917 embryo pbx2/4-MO and prdm1-/- 21.026 SRR658533 bud normal 20.0164 SRR797914 embryo pbx2/4-MO 18.250999999999998 SRR592703 pineal gland normal 18.0228 SRR658543 6 somite Gata5 morphan 17.96 SRR1035981 13 hpf rx3+/+ or rx3+/- 17.1596 SRR592702 pineal gland normal 15.4463 SRR658537 bud Gata6 morphant 15.0362 SRR658539 bud Gata5/6 morphant 14.9271 SRR592699 pineal gland normal 13.5151 SRR658547 6 somite Gata5/6 morphant 13.2905 SRR700534 heart control morpholino 12.7493 SRR514030 retina id2a morpholino 12.6806 SRR658545 6 somite Gata6 morphant 12.2778 SRR592700 pineal gland normal 12.085999999999999 SRR1048061 pineal gland dark 11.1596 SRR1035978 13 hpf rx3-/- 11.1442 SRR1048059 pineal gland light 10.2627 SRR372796 bud normal 9.993039999999999 SRR592698 pineal gland normal 9.92612 SRR797911 embryo prdm1-/- 9.80575 SRR749515 24 hpf eif3ha morphant 9.34957 SRR797908 embryo normal 9.28613 SRR1562529 intestine and pancreas normal 8.79775 SRR658541 6 somite normal 8.38229 SRR527832 16-36 hpf normal 8.35013 SRR527833 5 dpf normal 6.2287 SRR1035984 13 hpf normal 5.92298 SRR800046 sphere stage 5azaCyD treatment 5.55077 SRR535986 larvae nhsl1b mut 4.88705 SRR592701 pineal gland normal 4.44444 SRR800049 sphere stage control treatment 4.1997 SRR749514 24 hpf normal 4.11482 SRR800037 egg normal 4.04594 SRR1028003 head normal 4.03493 SRR700537 heart Gata4 morpholino 4.00713 SRR1028002 head normal 3.90659 ERR023146 head kidney normal 3.84144 SRR801555 embryo RPS19 morpholino 3.28735 SRR831692 embryo normal 2.99361 SRR519747 6 dpf VD3 treatment 2.99126 SRR1004787 larvae impdh1a morpholino 2.94457 SRR519732 7 dpf FETOH treatment 2.93571 SRR372802 5 dpf normal 2.9314 SRR1523214 embryo glut12 morpholino 2.86783 SRR1004789 larvae impdh2 morpholino 2.75005 SRR535913 larvae krox mut 2.72447 SRR1028004 head normal 2.7234599999999998 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.71136 SRR1565819 brain normal 2.6614400000000002 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.55576 SRR610741 3 dpf express Ras 2.54752 SRR1004788 larvae impdh1b morpholino 2.54251 SRR535926 larvae normal 2.36287 SRR519752 7 dpf VD3 treatment 2.3175 SRR535890 larvae normal 2.31636 SRR1565813 brain normal 2.29691 SRR372798 28 hpf normal 2.29462 SRR942764 embryo myd88-/- 2.28229 SRR1342217 embryo infection with Mycobacterium marinum 2.22935 SRR1534350 larvae 5 ug/l BDE47 treatment 2.2178299999999997 SRR1565807 brain normal 2.1716 SRR535943 larvae vangl mut 2.10417 SRR535978 larvae normal 2.06917 SRR1647683 spleen SVCV treatment 2.0274400000000004 SRR514028 retina control morpholino 2.0028900000000003 SRR610740 3 dpf normal 1.99458 SRR519742 4 dpf VD3 treatment 1.99377 SRR726541 5 dpf infection with Mycobacterium marinum 1.9529 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.92462 SRR1647682 spleen normal 1.9034799999999998 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.88117 SRR1039573 gastrointestinal diet 0.75 NPM 1.8783599999999998 SRR1565805 brain normal 1.8676599999999999 SRR1005530 embryo RPL11 morpholino 1.86372 ERR023145 heart normal 1.85602 SRR1188156 embryo Control PBS 4 hpi 1.8221 SRR535850 larvae hoxb1b mut 1.7942799999999999 SRR516134 skin male and 5 month 1.70843 SRR1565817 brain normal 1.68196 SRR519722 4 dpf FETOH treatment 1.6675400000000002 SRR527835 tail normal 1.6652 SRR610742 3 dpf express NICD 1.61984 SRR1647679 head kidney normal 1.60296 SRR1565811 brain normal 1.60191 SRR535852 larvae hoxb1b mut 1.5639299999999998 SRR1565809 brain normal 1.55851 SRR1005529 embryo control morpholino 1.54629 SRR801554 embryo control morpholino 1.54387 SRR1039571 gastrointestinal diet 0.1 NPM 1.51932 SRR1205154 5dpf transgenic sqET20 1.51912 SRR1104058 heart normal 1.49816 ERR023144 brain normal 1.46842 SRR1534349 larvae DMSO vehicle 1.46709 SRR1708345 embryo SIBAS 1.44812 SRR1188148 embryo Control PBS 0.5 hpi 1.44279 SRR1004786 larvae control morpholino 1.43181 SRR519727 6 dpf FETOH treatment 1.40235 SRR1523211 embryo control morpholino 1.40022 SRR1291417 5 dpi injected marinum 1.39648 SRR630463 5 dpf normal 1.3776 SRR1562532 spleen normal 1.37541 SRR535851 larvae normal 1.35677 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 1.35532 SRR527836 24hpf normal 1.34291 SRR1188152 embryo Insulin 0.5 hpi 1.33392 SRR1167753 embryo bacterial infection 1.32223 SRR1708346 embryo SIBPS 1.30624 SRR372800 2 dpf normal 1.25966 SRR1291414 5 dpi normal 1.2546899999999999 SRR1342218 embryo marco morpholino 1.2349299999999999 SRR527844 24hpf normal 1.23316 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.22024 SRR1534351 larvae 500 ug/l BDE47 treatment 1.1928 SRR519737 2 dpf VD3 treatment 1.18541 SRR527834 head normal 1.18203 SRR519717 2 dpf FETOH treatment 1.1779899999999999 SRR535849 larvae normal 1.1609 SRR1188160 embryo Insulin 4 hpi 1.1215700000000002 SRR1565815 brain normal 1.1131799999999998 SRR630464 5 dpf injected epidermidis 1.09731 SRR801556 embryo RPS19 and p53 morpholino 1.03445 SRR1035239 liver transgenic mCherry control 1.0269 SRR535848 larvae hoxb1b mut 0.9719059999999999 ERR023143 swim bladder normal 0.968686 SRR527840 24hpf normal 0.965033 SRR038624 embryo traf6 morpholino and bacterial infection 0.963408 SRR1104059 heart kctd10 mut 0.927716 SRR1167752 embryo normal 0.900597 SRR1035237 liver transgenic UHRF1 0.873516 SRR594769 blood normal 0.8375090000000001 SRR941749 anterior pectoral fin normal 0.8165789999999999 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.770015 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.723561 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.714439 SRR1569491 embryo normal 0.713672 SRR1562531 muscle normal 0.702635 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.690399 SRR941753 posterior pectoral fin normal 0.680133 SRR594771 endothelium normal 0.63578 SRR065197 3 dpf U1C knockout 0.609418 SRR726540 5 dpf normal 0.605763 SRR1648856 brain normal 0.605429 SRR516133 skin male and 5 month 0.580238 SRR038626 embryo control morpholino and bacterial infection 0.568122 SRR942769 embryo myd88+/+ 0.56171 SRR535847 larvae normal 0.487541 SRR1004785 larvae normal 0.48503599999999997 SRR800043 sphere stage normal 0.468379 SRR038627 embryo control morpholino 0.458563 SRR1647680 head kidney SVCV treatment 0.454747 SRR1647681 head kidney SVCV treatment 0.420547 SRR957180 heart 7 days after heart tip amputation 0.41147399999999995 SRR1299128 caudal fin Three days time after treatment 0.389554 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.379659 SRR1708344 embryo MUTPS 0.378091 ERR594418 retina transgenic flk1 and develop tumors 0.372205 SRR776508 embryo miR-146 knockdown 0.355694 ERR594417 retina normal 0.35020500000000004 SRR776507 embryo normal 0.321687 SRR1708343 embryo MUTAS 0.30589299999999997 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.297259 SRR516122 skin male and 3.5 year 0.292034 SRR1562528 eye normal 0.28618499999999997 SRR633550 larvae exposed to hypoxia stress 0.25408000000000003 SRR516125 skin male and 3.5 year 0.240637 SRR1569495 embryo normal 0.23537600000000003 SRR1562533 testis normal 0.22779899999999997 SRR1648854 brain normal 0.219108 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.203517 SRR372793 shield normal 0.200816 ERR594416 retina transgenic flk1 0.195909 SRR1299127 caudal fin Two days time after treatment 0.186066 SRR957181 heart normal 0.181925 SRR633516 larvae normal 0.171682 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.164979 SRR748488 sperm normal 0.14107 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.12213399999999999 SRR633544 larvae exposed to cold stress 0.08892639999999999 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.0821911 SRR1021213 sphere stage normal 0.0702125 SRR372791 dome normal 0.0432588