sample tissue condition fpkm SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 18.6379 SRR594769 blood normal 16.2429 SRR594771 endothelium normal 14.4023 SRR1299125 caudal fin Half day time after treatment 13.5454 SRR1648856 brain normal 12.0324 SRR1299126 caudal fin One day time after treatment 10.6107 SRR658533 bud normal 10.5885 SRR658545 6 somite Gata6 morphant 10.0746 SRR1205160 5dpf transgenic sqET20 and GFP+ 9.40971 SRR797914 embryo pbx2/4-MO 9.30579 SRR1299127 caudal fin Two days time after treatment 9.3023 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 9.151869999999999 SRR658541 6 somite normal 8.94619 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 8.64155 SRR658535 bud Gata5 morphant 8.53298 SRR797911 embryo prdm1-/- 8.34941 SRR797908 embryo normal 8.23633 SRR372796 bud normal 8.151639999999999 SRR658539 bud Gata5/6 morphant 8.00993 SRR658547 6 somite Gata5/6 morphant 7.93867 SRR797917 embryo pbx2/4-MO and prdm1-/- 7.80895 SRR1569491 embryo normal 7.6627600000000005 SRR1035239 liver transgenic mCherry control 7.47462 SRR519752 7 dpf VD3 treatment 7.40095 SRR1648854 brain normal 7.34138 SRR1569495 embryo normal 7.315189999999999 SRR1039571 gastrointestinal diet 0.1 NPM 7.211639999999999 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 7.04705 SRR1562529 intestine and pancreas normal 7.00167 SRR700534 heart control morpholino 6.89009 SRR658543 6 somite Gata5 morphan 6.70914 SRR1299129 caudal fin Seven days time after treatment 6.70885 SRR630464 5 dpf injected epidermidis 6.588769999999999 SRR1291417 5 dpi injected marinum 6.51392 SRR527836 24hpf normal 6.43508 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 6.1184 SRR1647683 spleen SVCV treatment 6.11736 SRR749514 24 hpf normal 6.1112400000000004 SRR658537 bud Gata6 morphant 6.08006 SRR1562530 liver normal 6.02621 ERR023144 brain normal 6.02459 SRR1647684 spleen SVCV treatment 6.0175 SRR1299128 caudal fin Three days time after treatment 6.0109 SRR527844 24hpf normal 5.97133 SRR065197 3 dpf U1C knockout 5.931830000000001 SRR630463 5 dpf normal 5.8391 SRR700537 heart Gata4 morpholino 5.8079 SRR519747 6 dpf VD3 treatment 5.77621 SRR776508 embryo miR-146 knockdown 5.77245 SRR1205154 5dpf transgenic sqET20 5.55735 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 5.54355 SRR535986 larvae nhsl1b mut 5.52682 SRR1035981 13 hpf rx3+/+ or rx3+/- 5.523619999999999 SRR1534350 larvae 5 ug/l BDE47 treatment 5.4520800000000005 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 5.4440800000000005 SRR1004786 larvae control morpholino 5.43234 SRR516124 skin male and 3.5 year 5.3825199999999995 SRR1004787 larvae impdh1a morpholino 5.31338 SRR1167752 embryo normal 5.269880000000001 SRR527840 24hpf normal 5.21245 SRR942769 embryo myd88+/+ 5.173369999999999 SRR519732 7 dpf FETOH treatment 5.03136 SRR519727 6 dpf FETOH treatment 5.01799 SRR1035978 13 hpf rx3-/- 4.95254 SRR535890 larvae normal 4.93496 ERR023145 heart normal 4.93414 SRR1291414 5 dpi normal 4.90112 SRR749515 24 hpf eif3ha morphant 4.89016 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 4.87204 SRR1004788 larvae impdh1b morpholino 4.7870800000000004 SRR372798 28 hpf normal 4.75547 SRR535913 larvae krox mut 4.75178 SRR726540 5 dpf normal 4.64531 SRR891504 liver normal 4.64216 SRR1342216 embryo norml 4.622319999999999 SRR519742 4 dpf VD3 treatment 4.50514 SRR519717 2 dpf FETOH treatment 4.50253 SRR1188152 embryo Insulin 0.5 hpi 4.4616 SRR038625 embryo traf6 morpholino 4.45861 SRR1039573 gastrointestinal diet 0.75 NPM 4.43878 ERR594417 retina normal 4.4237 SRR1647680 head kidney SVCV treatment 4.36701 SRR800046 sphere stage 5azaCyD treatment 4.32937 SRR1534351 larvae 500 ug/l BDE47 treatment 4.24631 SRR1648855 brain normal 4.2377 SRR1299124 caudal fin Zero day time after treatment 4.20022 SRR1028002 head normal 4.16827 SRR535978 larvae normal 4.147069999999999 SRR1647681 head kidney SVCV treatment 4.14492 SRR1188148 embryo Control PBS 0.5 hpi 4.12662 SRR519722 4 dpf FETOH treatment 4.06884 SRR1647682 spleen normal 4.06557 SRR1562528 eye normal 4.059080000000001 SRR941753 posterior pectoral fin normal 4.0403199999999995 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 4.0367 SRR941749 anterior pectoral fin normal 4.01579 SRR516126 skin male and 5 month 3.975 SRR1167756 embryo mpeg1 morpholino 3.9723800000000002 SRR519737 2 dpf VD3 treatment 3.95201 SRR372793 shield normal 3.9119900000000003 SRR1004789 larvae impdh2 morpholino 3.9092800000000003 SRR1004785 larvae normal 3.8294 SRR776509 embryo Salmonella infected 3.8188800000000005 SRR1188156 embryo Control PBS 4 hpi 3.79705 SRR535943 larvae vangl mut 3.7736 SRR535851 larvae normal 3.7063699999999997 SRR1534349 larvae DMSO vehicle 3.7005199999999996 SRR1167753 embryo bacterial infection 3.5671800000000005 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 3.49444 SRR372800 2 dpf normal 3.48754 SRR1188160 embryo Insulin 4 hpi 3.4527099999999997 ERR023146 head kidney normal 3.43068 SRR1562532 spleen normal 3.41546 SRR514028 retina control morpholino 3.4025800000000004 SRR516133 skin male and 5 month 3.36119 SRR1035984 13 hpf normal 3.33845 ERR594416 retina transgenic flk1 3.33028 SRR776507 embryo normal 3.3109300000000004 SRR942764 embryo myd88-/- 3.29828 SRR527832 16-36 hpf normal 3.27987 SRR592700 pineal gland normal 3.2101599999999997 SRR535852 larvae hoxb1b mut 3.20598 SRR1035237 liver transgenic UHRF1 3.11583 SRR038624 embryo traf6 morpholino and bacterial infection 3.0851599999999997 SRR610741 3 dpf express Ras 3.07992 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.0214 SRR516135 skin male and 5 month 3.00716 SRR527834 head normal 2.95319 SRR535926 larvae normal 2.95056 SRR1028004 head normal 2.9097299999999997 SRR1523214 embryo glut12 morpholino 2.8744400000000003 SRR1028003 head normal 2.84404 SRR514030 retina id2a morpholino 2.82062 SRR1048059 pineal gland light 2.8041400000000003 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.8012200000000003 SRR1708346 embryo SIBPS 2.79062 SRR516123 skin male and 3.5 year 2.7831799999999998 SRR891511 brain normal 2.78147 SRR535850 larvae hoxb1b mut 2.7353400000000003 SRR516129 skin male and 5 month 2.67676 SRR957181 heart normal 2.6625400000000004 SRR776510 embryo Salmonella infected and miR-146 knockdown 2.53881 SRR1104058 heart normal 2.51302 SRR957180 heart 7 days after heart tip amputation 2.5124299999999997 SRR535847 larvae normal 2.47338 SRR516130 skin male and 5 month 2.3488900000000004 SRR1523211 embryo control morpholino 2.32625 SRR516122 skin male and 3.5 year 2.32556 ERR023143 swim bladder normal 2.2936400000000003 SRR065196 3 dpf normal 2.23867 SRR516131 skin male and 5 month 2.2297700000000003 SRR516127 skin male and 5 month 2.2287 SRR1167762 embryo ptpn6 morpholino 2.2157299999999998 ERR594418 retina transgenic flk1 and develop tumors 2.21371 SRR891510 muscle normal 2.18902 SRR535849 larvae normal 2.1882599999999996 SRR516125 skin male and 3.5 year 2.17768 SRR610740 3 dpf normal 2.1320099999999997 SRR372802 5 dpf normal 2.11749 SRR535848 larvae hoxb1b mut 2.10831 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.08028 SRR1342217 embryo infection with Mycobacterium marinum 2.07658 SRR1562531 muscle normal 2.06894 SRR1342218 embryo marco morpholino 2.0461 SRR801556 embryo RPS19 and p53 morpholino 2.02818 SRR1104059 heart kctd10 mut 1.9928099999999997 SRR516128 skin male and 5 month 1.9796799999999999 SRR1021215 sphere stage Mzeomesa 1.95997 SRR1708343 embryo MUTAS 1.9139400000000002 SRR633544 larvae exposed to cold stress 1.90281 SRR610742 3 dpf express NICD 1.81915 SRR633550 larvae exposed to hypoxia stress 1.75878 SRR1005529 embryo control morpholino 1.69232 SRR801554 embryo control morpholino 1.68977 SRR1048061 pineal gland dark 1.68904 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.68822 SRR516134 skin male and 5 month 1.67103 SRR633516 larvae normal 1.6605299999999998 SRR1562533 testis normal 1.6434400000000002 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.63141 SRR516121 skin male and 3.5 year 1.631 SRR1708345 embryo SIBAS 1.5986200000000002 SRR800049 sphere stage control treatment 1.58413 SRR801555 embryo RPS19 morpholino 1.57701 SRR372791 dome normal 1.54115 SRR1005530 embryo RPL11 morpholino 1.53377 SRR592698 pineal gland normal 1.4927 SRR592703 pineal gland normal 1.48397 SRR748491 germ ring normal 1.4738200000000001 SRR038627 embryo control morpholino 1.41541 SRR527833 5 dpf normal 1.31577 SRR1647679 head kidney normal 1.27916 SRR726541 5 dpf infection with Mycobacterium marinum 1.2421799999999998 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.16547 SRR1708344 embryo MUTPS 1.15762 SRR891495 heart normal 1.11838 SRR831692 embryo normal 1.09039 SRR800043 sphere stage normal 1.06259 SRR1565815 brain normal 1.0503 SRR1565809 brain normal 1.01101 SRR1565817 brain normal 0.931225 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.9272379999999999 SRR038626 embryo control morpholino and bacterial infection 0.882785 SRR592702 pineal gland normal 0.848153 SRR1565811 brain normal 0.829362 SRR1565805 brain normal 0.818801 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.8167479999999999 SRR1565813 brain normal 0.767833 SRR1565819 brain normal 0.7122189999999999 SRR891512 blood normal 0.631731 SRR748488 sperm normal 0.60736 SRR1021213 sphere stage normal 0.572749 SRR800045 muscle normal 0.555138 SRR1565807 brain normal 0.488245 SRR527835 tail normal 0.45294399999999996 SRR516132 skin male and 5 month 0.359344 SRR592699 pineal gland normal 0.337316 SRR726542 5 dpf infection with control 0.325011 SRR748489 egg normal 0.21609499999999998 SRR592701 pineal gland normal 0.164634 SRR748490 1 kcell normal 0.0419075 SRR372789 1K cell normal 0.0314617 SRR1621206 embryo normal 0.019859799999999997 SRR1049814 256 cell normal 0.013498